Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_30957_v3 Cicer arietinum L. HOM05D005057 ORTHO05D006570 1.3e-105 386.3 189 100.0
Ca_00428_v3 Cicer arietinum L. HOM05D005057 ORTHO05D006570 9.8e-85 317.0 152 99.3
Medtr2g015860 Medicago truncatula HOM05D005057 ORTHO05D006570 2.9e-81 305.4 189 85.2
TPR.G30010 Trifolium pratense HOM05D005057 ORTHO05D006570 1.9e-80 302.8 187 84.5
Psat1g199000 Pisum sativum HOM05D005057 ORTHO05D006570 5.2e-78 294.7 185 82.7
Lj6g0017686 Lotus japonicus HOM05D005057 ORTHO05D006570 3.6e-71 271.9 185 79.5
Lalb_Chr18g0059151 Lupinus albus HOM05D005057 ORTHO05D006570 8.9e-70 267.3 182 78.6
Lalb_Chr15g0089481 Lupinus albus HOM05D005057 ORTHO05D006570 3.4e-69 265.4 152 88.2
Phvul.006G176700 Phaseolus vulgaris HOM05D005057 ORTHO05D006570 5.4e-67 258.1 197 72.1
VMungo0540G0206 Vigna mungo HOM05D005057 ORTHO05D006570 6.6e-65 251.1 136 89.7
Glyma.13G230500 Glycine max HOM05D005057 ORTHO05D006570 3.6e-63 245.4 188 72.3
Sed0014368 Sechium edule HOM05D005057 ORTHO05D006570 1.4e-62 243.4 172 75.0
CANSAT35G0522 Cannabis sativa HOM05D005057 ORTHO05D006570 5.2e-62 241.5 166 75.9
arahy.Tifrunner.gnm1.ann1.9TM733 Arachis hypogaea HOM05D005057 ORTHO05D006570 1.5e-61 240.0 123 93.5
arahy.Tifrunner.gnm1.ann1.E17GNY Arachis hypogaea HOM05D005057 ORTHO05D006570 1.5e-61 240.0 123 93.5
ClCG03G007800 Citrullus lanatus HOM05D005057 ORTHO05D006570 3.4e-61 238.8 178 73.6
CiPaw.09G069000 Carya illinoinensis HOM05D005057 ORTHO05D006570 4.4e-61 238.4 189 69.8
Haze_06250 Corylus avellana HOM05D005057 ORTHO05D006570 4.4e-61 238.4 157 79.0
RcHm_v2.0_Chr5g0010551 Rosa chinensis HOM05D005057 ORTHO05D006570 4.4e-61 238.4 164 75.0
Ciclev10014965m.g Citrus clementina HOM05D005057 ORTHO05D006570 1.7e-60 236.5 139 83.5
MD10G1281300 Malus domestica HOM05D005057 ORTHO05D006570 1.7e-60 236.5 186 68.3
FvH4_3g07940 Fragaria vesca HOM05D005057 ORTHO05D006570 2.9e-60 235.7 124 91.1
CsaV3_1G033430 Cucumis sativus L. HOM05D005057 ORTHO05D006570 4.9e-60 235.0 176 70.5
MELO3C002642.2 Cucumis melo HOM05D005057 ORTHO05D006570 6.4e-60 234.6 176 71.6
Prupe.4G059900 Prunus persica HOM05D005057 ORTHO05D006570 1.9e-59 233.0 170 72.4
Dinv04618 Davidia involucrata HOM05D005057 ORTHO05D006570 9.2e-59 230.7 145 80.0
QL05p046461 Quercus lobata HOM05D005057 ORTHO05D006570 9.2e-59 230.7 145 82.1
ATR0602G189 Amborella trichopoda HOM05D005057 ORTHO05D006570 2.1e-58 229.6 163 74.8
Nn1g09100 Nelumbo nucifera HOM05D005057 ORTHO05D006570 3.5e-58 228.8 128 87.5
Duzib160G0357 Durio zibethinus HOM05D005057 ORTHO05D006570 4.6e-58 228.4 146 78.1
MBI06_g25988_MAGBIO Magnolia biondii HOM05D005057 ORTHO05D006570 4.6e-58 228.4 172 72.1
Thecc.06G172400 Theobroma cacao HOM05D005057 ORTHO05D006570 6.0e-58 228.0 149 77.9
Eucgr.D00512 Eucalyptus grandis HOM05D005057 ORTHO05D006570 7.8e-58 227.6 169 71.6
Gohir.D06G136700 Gossypium hirsutum HOM05D005057 ORTHO05D006570 7.8e-58 227.6 179 66.5
Sabra11G0046800 Salix brachista HOM05D005057 ORTHO05D006570 7.8e-58 227.6 172 71.5
Gorai.010G158900 Gossypium raimondii HOM05D005057 ORTHO05D006570 1.0e-57 227.3 179 66.5
Manes.16G037800 Manihot esculenta HOM05D005057 ORTHO05D006570 1.0e-57 227.3 136 82.4
Cc02_g14710 Coffea canephora HOM05D005057 ORTHO05D006570 1.7e-57 226.5 176 69.3
Zm00001eb162010 Zea mays HOM05D005057 ORTHO05D006570 1.7e-57 226.5 130 83.8
Aqoxy4G00443 Aquilegia oxysepala HOM05D005057 ORTHO05D006570 3.0e-57 225.7 124 85.5
PGR004G2757 Punica granatum HOM05D005057 ORTHO05D006570 3.0e-57 225.7 124 87.1
Gohir.A06G130800 Gossypium hirsutum HOM05D005057 ORTHO05D006570 3.9e-57 225.3 179 65.9
PSO782G3653 Papaver somniferum HOM05D005057 ORTHO05D006570 5.1e-57 224.9 124 86.3
Ah.09g233650 Amaranthus hybridus HOM05D005057 ORTHO05D006570 6.6e-57 224.6 134 82.8
Sopen02g021880 Solanum pennellii HOM05D005057 ORTHO05D006570 6.6e-57 224.6 176 68.8
PSO063G4235 Papaver somniferum HOM05D005057 ORTHO05D006570 8.6e-57 224.2 170 68.8
EL10Ac8g20510 Beta vulgaris HOM05D005057 ORTHO05D006570 1.1e-56 223.8 124 87.1
Migut.H01447 Erythranthe guttata HOM05D005057 ORTHO05D006570 1.1e-56 223.8 199 62.3
Potri.011G065000 Populus trichocarpa HOM05D005057 ORTHO05D006570 1.1e-56 223.8 172 69.8
Actinidia16804 Actinidia chinensis HOM05D005057 ORTHO05D006570 1.5e-56 223.4 172 69.8
MSTRG.13217 Avicennia marina HOM05D005057 ORTHO05D006570 1.5e-56 223.4 134 82.1
Os01g0613900 Oryza sativa ssp. japonica HOM05D005057 ORTHO05D006570 1.5e-56 223.4 124 85.5
Atru.chr10.1683 Acer truncatum HOM05D005057 ORTHO05D006570 1.9e-56 223.0 175 69.1
FAN07G2484 Fragaria x ananassa HOM05D005057 ORTHO05D006570 1.9e-56 223.0 155 75.5
Sc12g0008060 Simmondsia chinensis HOM05D005057 ORTHO05D006570 2.5e-56 222.6 136 80.9
vmacro03932 Vaccinium macrocarpon HOM05D005057 ORTHO05D006570 2.5e-56 222.6 176 70.5
Carub.0004s1572 Capsella rubella HOM05D005057 ORTHO05D006570 3.3e-56 222.2 124 83.9
BcaB02g10615 Brassica carinata HOM05D005057 ORTHO05D006570 5.6e-56 221.5 124 83.9
A05p11560 Brassica napus HOM05D005057 ORTHO05D006570 5.6e-56 221.5 149 73.2
C04p15030 Brassica napus HOM05D005057 ORTHO05D006570 5.6e-56 221.5 149 73.2
AL4G30000 Arabidopsis lyrata HOM05D005057 ORTHO05D006570 9.5e-56 220.7 124 83.1
Cpa.g.sc7.56 Carica papaya HOM05D005057 ORTHO05D006570 1.6e-55 219.9 124 84.7
CDE10G0488 Ceratophyllum demersum HOM05D005057 ORTHO05D006570 2.1e-55 219.5 164 69.5
THA.LOC104814250 Tarenaya hassleriana HOM05D005057 ORTHO05D006570 2.1e-55 219.5 168 67.3
AT2G34090 Arabidopsis thaliana HOM05D005057 ORTHO05D006570 2.8e-55 219.2 136 77.9
HanXRQChr13g0397391 Helianthus annuus HOM05D005057 ORTHO05D006570 2.8e-55 219.2 132 80.3
TWI38G0714 Tripterygium wilfordii HOM05D005057 ORTHO05D006570 2.8e-55 219.2 181 66.9
BraA05t20104Z Brassica rapa HOM05D005057 ORTHO05D006570 3.6e-55 218.8 149 73.2
Solyc02g076950.2 Solanum lycopersicum HOM05D005057 ORTHO05D006570 3.6e-55 218.8 176 67.6
AagrBONN_evm.TU.Sc2ySwM_344.2851 Anthoceros agrestis HOM05D005057 ORTHO05D006570 4.7e-55 218.4 133 78.9
Hma1.2p1_0155F.1_g068170 Hydrangea macrophylla HOM05D005057 ORTHO05D006570 4.7e-55 218.4 132 81.8
Sp4g16440 Schrenkiella parvula HOM05D005057 ORTHO05D006570 4.7e-55 218.4 158 69.0
Aa31LG9G13900 Aethionema arabicum HOM05D005057 ORTHO05D006570 8.1e-55 217.6 132 77.3
Thhalv10016658m.g Eutrema salsugineum HOM05D005057 ORTHO05D006570 1.1e-54 217.2 160 69.4
SalBow7G0088 Salvia bowleyana HOM05D005057 ORTHO05D006570 1.1e-54 217.2 195 64.1
GSVIVG01021196001 Vitis vinifera HOM05D005057 ORTHO05D006570 1.1e-54 217.2 176 66.5
ECA236G3111 Erigeron canadensis HOM05D005057 ORTHO05D006570 1.8e-54 216.5 172 69.8
Rhsim13G0191300 Rhododendron simsii HOM05D005057 ORTHO05D006570 1.8e-54 216.5 117 88.9
SGA_v2.0_scaffold307G48045 Striga asiatica HOM05D005057 ORTHO05D006570 2.3e-54 216.1 160 70.6
Mapoly0152s0011 Marchantia polymorpha HOM05D005057 ORTHO05D006570 6.8e-54 214.5 126 81.0
DCAR_004016 Daucus carota HOM05D005057 ORTHO05D006570 1.2e-53 213.8 146 76.0
Lj2A297G103 Lonicera japonica HOM05D005057 ORTHO05D006570 7.5e-53 211.1 116 87.1
Oeu041787.3 Olea europaea HOM05D005057 ORTHO05D006570 7.5e-53 211.1 116 87.9
CAN.G370.63 Capsicum annuum HOM05D005057 ORTHO05D006570 1.3e-52 210.3 117 86.3
Aqoxy12s001 Aquilegia oxysepala HOM05D005057 ORTHO05D006570 2.2e-52 209.5 116 85.3
BolC4t23078H Brassica oleracea HOM05D005057 ORTHO05D006570 6.4e-52 208.0 168 66.7
CARHR128190 Cardamine hirsuta HOM05D005057 ORTHO05D006570 8.3e-52 207.6 117 82.1
AUR62031175 Chenopodium quinoa HOM05D005057 ORTHO05D006570 1.6e-50 203.4 124 79.8
Pp3c16_13000 Physcomitrium patens HOM05D005057 ORTHO05D006570 3.5e-50 202.2 124 77.4
Nitab4.5_0000681g0230 Nicotiana tabacum HOM05D005057 ORTHO05D006570 2.5e-48 196.1 170 64.7
Nitab4.5_0003322g0070 Nicotiana tabacum HOM05D005057 ORTHO05D006570 4.3e-48 195.3 184 62.0
SMO142G0032 Selaginella moellendorffii HOM05D005057 ORTHO05D006570 2.8e-47 192.6 117 76.1
FvH4_4g20380 Fragaria vesca HOM05D005057 ORTHO05D006570 8.1e-47 191.0 104 86.5
Cre01.g033700 Chlamydomonas reinhardtii HOM05D005057 ORTHO05D006570 1.8e-46 189.9 135 70.4
MCO11G641 Micromonas commoda HOM05D005057 ORTHO05D006570 1.2e-45 187.2 128 68.0
PRCOL_00006187 Prasinoderma coloniale HOM05D005057 ORTHO05D006570 1.5e-45 186.8 125 72.0
MD05G1302500 Malus domestica HOM05D005057 ORTHO05D006570 6.4e-44 181.4 140 67.1
Lsat_1_v5_gn_7_23040 Lactuca sativa HOM05D005057 ORTHO05D006570 4.6e-42 175.3 97 88.7
FAN11G1223 Fragaria x ananassa HOM05D005057 ORTHO05D006570 7.8e-42 174.5 139 70.5
TAR626G0988 Trochodendron aralioides HOM05D005057 ORTHO05D006570 1.7e-41 173.3 136 68.4
FAN25G1331 Fragaria x ananassa HOM05D005057 ORTHO05D006570 1.5e-40 170.2 152 62.5
HPP92_020166 Vanilla planifolia HOM05D005057 ORTHO05D006570 4.3e-40 168.7 144 64.6
Hund21184 Selenicereus undatus HOM05D005057 ORTHO05D006570 5.3e-38 161.8 97 83.5
FAN16G2413 Fragaria x ananassa HOM05D005057 ORTHO05D006570 1.4e-35 153.7 157 58.0
BcaC04g22954 Brassica carinata HOM05D005057 ORTHO05D006570 3.2e-35 152.5 135 61.5
C09p55570 Brassica napus HOM05D005057 ORTHO05D006570 3.2e-35 152.5 135 61.5
BolC9t54241H Brassica oleracea HOM05D005057 ORTHO05D006570 3.2e-35 152.5 135 61.5
unitig_22.g6756 Utricularia gibba HOM05D005057 ORTHO05D006570 1.2e-34 150.6 84 88.1
AUR62036592 Chenopodium quinoa HOM05D005057 ORTHO05D006570 1.9e-32 143.3 88 83.0
Glyma.14G170500 Glycine max HOM05D005057 ORTHO05D006570 2.8e-31 139.4 124 61.3
COL.COLO4_25087 Corchorus olitorius HOM05D005057 ORTHO05D006570 1.2e-29 134.0 83 72.3
BcaC01g06160 Brassica carinata HOM05D005057 ORTHO05D006570 4.9e-28 128.6 145 54.5
BolC4t26729H Brassica oleracea HOM05D005057 ORTHO05D006570 1.9e-27 126.7 94 71.3
BolC7t41970H Brassica oleracea HOM05D005057 ORTHO05D006570 7.1e-27 124.8 94 70.2
MD16G1033100 Malus domestica HOM05D005057 ORTHO05D006570 4.9e-20 102.1 62 77.4
COL.COLO4_31315 Corchorus olitorius HOM05D005057 ORTHO05D006570 4.2e-19 99.0 116 48.3
Hma1.2p1_0155F.1_g068180 Hydrangea macrophylla HOM05D005057 ORTHO05D006570 2.7e-18 96.3 116 48.3
BcaC01g03610 Brassica carinata HOM05D005057 ORTHO05D019871 3.2e-11 72.8 73 49.3


User provided reference genes

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