Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_03534_v3 Cicer arietinum L. HOM05D005433 ORTHO05D006675 1.0e-138 496.9 274 100.0
Ca_30930_v3 Cicer arietinum L. HOM05D005433 ORTHO05D006675 1.0e-138 496.9 274 100.0
Psat5g241440 Pisum sativum HOM05D005433 ORTHO05D006675 1.4e-92 343.6 283 74.2
Medtr2g078540 Medicago truncatula HOM05D005433 ORTHO05D006675 1.8e-92 343.2 284 75.0
Lj3g0015051 Lotus japonicus HOM05D005433 ORTHO05D006675 7.3e-89 331.3 284 70.4
TPR.G17538 Trifolium pratense HOM05D005433 ORTHO05D006675 7.3e-89 331.3 273 74.4
arahy.Tifrunner.gnm1.ann1.H96BGA Arachis hypogaea HOM05D005433 ORTHO05D006675 7.5e-86 321.2 287 66.6
Phvul.010G112200 Phaseolus vulgaris HOM05D005433 ORTHO05D006675 1.0e-82 310.8 282 65.6
arahy.Tifrunner.gnm1.ann1.7LX6SY Arachis hypogaea HOM05D005433 ORTHO05D006675 3.9e-82 308.9 289 65.4
VMungo0331G0725 Vigna mungo HOM05D005433 ORTHO05D006675 1.9e-81 306.6 282 66.0
Lalb_Chr25g0286191 Lupinus albus HOM05D005433 ORTHO05D006675 4.7e-80 302.0 245 72.2
Glyma.12G227200 Glycine max HOM05D005433 ORTHO05D006675 1.1e-79 300.8 280 66.8
TWI38G0185 Tripterygium wilfordii HOM05D005433 ORTHO05D006675 1.3e-69 267.3 285 59.3
CiPaw.12G116900 Carya illinoinensis HOM05D005433 ORTHO05D006675 7.1e-68 261.5 266 59.0
Cpa.g.sc80.11 Carica papaya HOM05D005433 ORTHO05D006675 5.6e-65 251.9 280 57.9
Manes.03G104600 Manihot esculenta HOM05D005433 ORTHO05D006675 2.1e-64 250.0 238 62.6
CSS0020446 Camellia sinensis var. sinensis HOM05D005433 ORTHO05D006675 6.2e-64 248.4 281 56.2
Hma1.2p1_0416F.1_g148475 Hydrangea macrophylla HOM05D005433 ORTHO05D006675 6.2e-64 248.4 256 60.2
Ciclev10009151m.g Citrus clementina HOM05D005433 ORTHO05D006675 8.1e-64 248.1 279 57.3
Cfa020622 Carpinus fangiana HOM05D005433 ORTHO05D006675 6.8e-63 245.0 282 54.6
ClCG05G009210 Citrullus lanatus HOM05D005433 ORTHO05D006675 5.8e-62 241.9 286 54.9
Potri.011G097800 Populus trichocarpa HOM05D005433 ORTHO05D006675 9.9e-62 241.1 279 55.2
QL08p023594 Quercus lobata HOM05D005433 ORTHO05D006675 9.9e-62 241.1 265 56.6
PGR083G2284 Punica granatum HOM05D005433 ORTHO05D006675 1.3e-61 240.7 283 53.7
Thecc.07G099400 Theobroma cacao HOM05D005433 ORTHO05D006675 1.3e-61 240.7 280 56.8
Sabra11G0091300 Salix brachista HOM05D005433 ORTHO05D006675 1.7e-61 240.4 279 55.2
TAR624G0745 Trochodendron aralioides HOM05D005433 ORTHO05D006675 8.4e-61 238.0 283 54.8
Haze_09383 Corylus avellana HOM05D005433 ORTHO05D006675 1.1e-60 237.7 285 53.0
GSVIVG01014263001 Vitis vinifera HOM05D005433 ORTHO05D006675 4.6e-59 232.3 277 54.9
Duzib213G0446 Durio zibethinus HOM05D005433 ORTHO05D006675 6.0e-59 231.9 281 56.2
CsaV3_3G019570 Cucumis sativus L. HOM05D005433 ORTHO05D006675 1.3e-58 230.7 283 52.3
Eucgr.F01178 Eucalyptus grandis HOM05D005433 ORTHO05D006675 1.7e-58 230.3 224 57.6
Peaxi162Scf00027g01311 Petunia axillaris HOM05D005433 ORTHO05D006675 2.3e-58 229.9 242 57.0
MD03G1235600 Malus domestica HOM05D005433 ORTHO05D006675 3.0e-58 229.6 290 54.1
Nitab4.5_0005232g0030 Nicotiana tabacum HOM05D005433 ORTHO05D006675 3.0e-58 229.6 268 52.6
Actinidia35236 Actinidia chinensis HOM05D005433 ORTHO05D006675 5.1e-58 228.8 289 53.6
THA.LOC104810456 Tarenaya hassleriana HOM05D005433 ORTHO05D006675 1.1e-57 227.6 259 57.5
EL10Ac4g08262 Beta vulgaris HOM05D005433 ORTHO05D006675 1.5e-57 227.3 231 59.3
Gorai.002G066400 Gossypium raimondii HOM05D005433 ORTHO05D006675 5.6e-57 225.3 282 56.7
Nitab4.5_0001208g0170 Nicotiana tabacum HOM05D005433 ORTHO05D006675 5.6e-57 225.3 268 51.9
Aa31LG8G2320 Aethionema arabicum HOM05D005433 ORTHO05D006675 7.3e-57 224.9 268 54.5
Gohir.D01G046900 Gossypium hirsutum HOM05D005433 ORTHO05D006675 7.3e-57 224.9 282 56.7
Cc05_g11610 Coffea canephora HOM05D005433 ORTHO05D006675 1.2e-56 224.2 277 51.3
Gohir.A01G060400 Gossypium hirsutum HOM05D005433 ORTHO05D006675 1.6e-56 223.8 282 56.4
Lsat_1_v5_gn_5_127421 Lactuca sativa HOM05D005433 ORTHO05D006675 1.1e-55 221.1 217 58.1
Nn1g06380 Nelumbo nucifera HOM05D005433 ORTHO05D006675 1.8e-55 220.3 250 54.8
MBI07_g32542_MAGBIO Magnolia biondii HOM05D005433 ORTHO05D006675 3.1e-55 219.5 265 53.6
CANSAT35G1219 Cannabis sativa HOM05D005433 ORTHO05D006675 4.0e-55 219.2 289 52.9
Rhsim04G0023000 Rhododendron simsii HOM05D005433 ORTHO05D006675 4.0e-55 219.2 292 51.4
RcHm_v2.0_Chr5g0032261 Rosa chinensis HOM05D005433 ORTHO05D006675 9.0e-55 218.0 289 53.6
SGA_v2.0_scaffold73G24224 Striga asiatica HOM05D005433 ORTHO05D006675 9.0e-55 218.0 274 50.7
ECA234G3266 Erigeron canadensis HOM05D005433 ORTHO05D006675 2.0e-54 216.9 269 52.4
Thhalv10021284m.g Eutrema salsugineum HOM05D005433 ORTHO05D006675 4.4e-54 215.7 275 51.6
PGSC0003DMG400021311 Solanum tuberosum HOM05D005433 ORTHO05D006675 7.6e-54 214.9 261 53.3
CDE10G1174 Ceratophyllum demersum HOM05D005433 ORTHO05D006675 1.7e-53 213.8 234 54.7
CAN.G1119.17 Capsicum annuum HOM05D005433 ORTHO05D006675 2.9e-53 213.0 270 51.1
AUR62036145 Chenopodium quinoa HOM05D005433 ORTHO05D006675 4.9e-53 212.2 276 51.1
FAN25G0011 Fragaria x ananassa HOM05D005433 ORTHO05D006675 4.9e-53 212.2 292 49.0
SalBow8G0584 Salvia bowleyana HOM05D005433 ORTHO05D006675 4.9e-53 212.2 247 54.7
vmacro09517 Vaccinium macrocarpon HOM05D005433 ORTHO05D006675 4.9e-53 212.2 320 46.9
HanXRQChr10g0302491 Helianthus annuus HOM05D005433 ORTHO05D006675 6.4e-53 211.8 267 51.7
FAN11G1719 Fragaria x ananassa HOM05D005433 ORTHO05D006675 8.4e-53 211.5 291 49.8
FvH4_3g19170 Fragaria vesca HOM05D005433 ORTHO05D006675 1.4e-52 210.7 292 49.0
PSO675G6755 Papaver somniferum HOM05D005433 ORTHO05D006675 1.4e-52 210.7 261 50.6
AT3G15110 Arabidopsis thaliana HOM05D005433 ORTHO05D006675 1.9e-52 210.3 273 50.9
A05p34330 Brassica napus HOM05D005433 ORTHO05D006675 1.9e-52 210.3 277 51.6
BraA05t22254Z Brassica rapa HOM05D005433 ORTHO05D006675 1.9e-52 210.3 277 51.6
Glyma.06G235100 Glycine max HOM05D005433 ORTHO05D006675 1.9e-52 210.3 261 54.4
BcaB06g29536 Brassica carinata HOM05D005433 ORTHO05D006675 2.4e-52 209.9 277 51.3
C05p52110 Brassica napus HOM05D005433 ORTHO05D006675 2.4e-52 209.9 277 51.3
BolC5t33896H Brassica oleracea HOM05D005433 ORTHO05D006675 2.4e-52 209.9 277 51.3
Migut.M00771 Erythranthe guttata HOM05D005433 ORTHO05D006675 7.1e-52 208.4 220 55.0
FAN16G0161 Fragaria x ananassa HOM05D005433 ORTHO05D006675 7.1e-52 208.4 294 49.0
Sopen10g003020 Solanum pennellii HOM05D005433 ORTHO05D006675 9.3e-52 208.0 271 50.9
Sc16g0007310 Simmondsia chinensis HOM05D005433 ORTHO05D006675 1.6e-51 207.2 268 48.9
PSO541G1927 Papaver somniferum HOM05D005433 ORTHO05D006675 2.1e-51 206.8 276 50.4
Sp3g13310 Schrenkiella parvula HOM05D005433 ORTHO05D006675 2.7e-51 206.5 276 50.4
Aqoxy4G00583 Aquilegia oxysepala HOM05D005433 ORTHO05D006675 4.6e-51 205.7 241 55.2
Solyc10g007120.4 Solanum lycopersicum HOM05D005433 ORTHO05D006675 4.6e-51 205.7 271 50.2
ATR0602G229 Amborella trichopoda HOM05D005433 ORTHO05D006675 7.8e-51 204.9 276 50.0
AL3G27460 Arabidopsis lyrata HOM05D005433 ORTHO05D006675 6.6e-50 201.8 277 49.5
MSTRG.15245 Avicennia marina HOM05D005433 ORTHO05D006675 6.6e-50 201.8 245 52.2
Carub.0003s1475 Capsella rubella HOM05D005433 ORTHO05D006675 8.7e-50 201.4 280 47.1
FAN21G1059 Fragaria x ananassa HOM05D005433 ORTHO05D006675 1.1e-49 201.1 290 48.3
Lj2g0011732 Lotus japonicus HOM05D005433 ORTHO05D006675 1.5e-49 200.7 284 49.6
DCAR_019573 Daucus carota HOM05D005433 ORTHO05D006675 4.3e-49 199.1 257 51.8
Atru.chr2.2384 Acer truncatum HOM05D005433 ORTHO05D006675 3.4e-46 189.5 205 55.6
Dinv14949 Davidia involucrata HOM05D005433 ORTHO05D006675 9.9e-46 188.0 203 58.6
Gohir.D11G306500 Gossypium hirsutum HOM05D005433 ORTHO05D006675 2.9e-45 186.4 265 48.3
Os02g0307800 Oryza sativa ssp. japonica HOM05D005433 ORTHO05D006675 3.8e-45 186.0 191 55.0
Gorai.007G325500 Gossypium raimondii HOM05D005433 ORTHO05D006675 2.4e-44 183.3 248 49.2
Gohir.A11G286600 Gossypium hirsutum HOM05D005433 ORTHO05D006675 9.3e-44 181.4 269 47.6
unitig_85.g27411 Utricularia gibba HOM05D005433 ORTHO05D006675 1.2e-43 181.0 284 45.4
unitig_86.g29837 Utricularia gibba HOM05D005433 ORTHO05D006675 1.2e-43 181.0 284 45.4
Zm00001eb235270 Zea mays HOM05D005433 ORTHO05D006675 1.5e-41 174.1 218 48.2
Prupe.4G173400 Prunus persica HOM05D005433 ORTHO05D006675 1.6e-40 170.6 211 55.5
MSTRG.12890 Avicennia marina HOM05D005433 ORTHO05D006675 3.7e-40 169.5 230 48.3
arahy.Tifrunner.gnm1.ann1.8TDA44 Arachis hypogaea HOM05D005433 ORTHO05D006675 3.1e-39 166.4 287 44.9
Psat1g075280 Pisum sativum HOM05D005433 ORTHO05D006675 6.9e-39 165.2 270 45.9
MD11G1256600 Malus domestica HOM05D005433 ORTHO05D006675 2.0e-38 163.7 201 53.7
Sed0015039 Sechium edule HOM05D005433 ORTHO05D006675 9.9e-38 161.4 150 60.0
arahy.Tifrunner.gnm1.ann1.2X8QJZ Arachis hypogaea HOM05D005433 ORTHO05D006675 2.9e-37 159.8 281 44.5
AUR62019491 Chenopodium quinoa HOM05D005433 ORTHO05D006675 6.4e-37 158.7 262 46.2
TPR.G19712 Trifolium pratense HOM05D005433 ORTHO05D006675 1.9e-36 157.1 271 45.8
Medtr6g042030 Medicago truncatula HOM05D005433 ORTHO05D006675 1.2e-35 154.5 273 44.0
Migut.H01964 Erythranthe guttata HOM05D005433 ORTHO05D006675 7.9e-35 151.8 214 47.2
Thecc.07G099700 Theobroma cacao HOM05D005433 ORTHO05D006675 6.2e-32 142.1 142 59.9
Pp3c11_19700 Physcomitrium patens HOM05D005433 ORTHO05D006675 1.4e-31 141.0 187 47.6
Lj8A153T41 Lonicera japonica HOM05D005433 ORTHO05D006675 4.0e-31 139.4 184 53.8
HPP92_027387 Vanilla planifolia HOM05D005433 ORTHO05D006675 4.0e-31 139.4 190 47.4
Glyma.13G273100 Glycine max HOM05D005433 ORTHO05D006675 2.2e-29 133.7 157 59.9
Mapoly0060s0103 Marchantia polymorpha HOM05D005433 ORTHO05D006675 2.5e-28 130.2 218 45.0
AagrBONN_evm.TU.Sc2ySwM_368.1222 Anthoceros agrestis HOM05D005433 ORTHO05D006675 2.1e-27 127.1 165 43.0
Lsat_1_v5_gn_7_42380 Lactuca sativa HOM05D005433 ORTHO05D006675 3.5e-27 126.3 134 57.5
Lalb_Chr03g0030801 Lupinus albus HOM05D005433 ORTHO05D006675 2.2e-24 117.1 144 50.7
C02p31450 Brassica napus HOM05D005433 ORTHO05D006675 3.4e-22 109.8 101 62.4
Lsat_1_v5_gn_0_4360 Lactuca sativa HOM05D005433 ORTHO05D006675 4.5e-22 109.4 129 53.5
C09p61630 Brassica napus HOM05D005433 ORTHO05D006675 5.9e-22 109.0 165 47.3
BolC9t59001H Brassica oleracea HOM05D005433 ORTHO05D006675 5.9e-22 109.0 165 47.3
SMO143G0248 Selaginella moellendorffii HOM05D009232 ORTHO05D006675 6.5e-21 105.5 187 37.4
CBR_g28819 Chara braunii HOM05D005433 ORTHO05D006675 9.3e-20 101.7 233 36.1
SGA_v2.0_scaffold70G23696 Striga asiatica HOM05D005433 ORTHO05D006675 9.3e-20 101.7 127 47.2
EL10Ac5g11588 Beta vulgaris HOM05D005433 ORTHO05D006675 2.2e-16 90.5 70 70.0
CARHR090080 Cardamine hirsuta HOM05D005433 ORTHO05D006675 9.1e-15 85.1 73 67.1
BcaB01g02390 Brassica carinata HOM05D005433 ORTHO05D006675 2.0e-14 84.0 182 39.0
Oeu051094.1 Olea europaea HOM05D005433 ORTHO05D006675 1.0e-13 81.6 230 34.3
Oeu051093.1 Olea europaea HOM05D005433 ORTHO05D006675 6.5e-13 79.0 182 35.2
Cre03.g167400 Chlamydomonas reinhardtii HOM05D005433 ORTHO05D006675 1.1e-12 78.2 165 34.5
MCO01G315 Micromonas commoda HOM05D005433 ORTHO05D006675 4.4e-09 66.2 173 30.6
Oeu055126.1 Olea europaea HOM05D005433 ORTHO05D006675 5.7e-09 65.9 113 44.2
Lalb_Chr03g0030791 Lupinus albus HOM05D005433 ORTHO05D006675 5.3e-07 59.3 103 43.7
Lsat_1_v5_gn_4_180780 Lactuca sativa HOM05D005433 ORTHO05D006675 2.0e-06 57.4 60 50.0


User provided reference genes

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