Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_30898_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 1.9e-107 392.5 195 100.0
Ca_22305_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 3.5e-85 318.5 376 51.9
Psat6g084240 Pisum sativum HOM05D007282 ORTHO05D009214 3.4e-72 275.4 188 79.3
Medtr1g059660 Medicago truncatula HOM05D007282 ORTHO05D009214 7.5e-72 274.2 199 75.4
TPR.G14774 Trifolium pratense HOM05D007282 ORTHO05D009214 3.7e-71 271.9 196 73.0
Glyma.02G201500 Glycine max HOM05D007282 ORTHO05D009214 1.0e-65 253.8 195 69.7
Lj5g0026678 Lotus japonicus HOM05D007282 ORTHO05D009214 7.5e-64 247.7 197 69.0
Glyma.10G075000 Glycine max HOM05D007282 ORTHO05D009214 4.9e-63 245.0 200 67.0
Lalb_Chr06g0172471 Lupinus albus HOM05D007282 ORTHO05D009214 1.5e-59 233.4 198 66.2
Phvul.007G163900 Phaseolus vulgaris HOM05D007282 ORTHO05D009214 6.2e-58 228.0 197 62.4
Oeu025665.1 Olea europaea HOM05D007282 ORTHO05D009214 1.9e-54 216.5 146 73.3
Sabra06G0161800 Salix brachista HOM05D007282 ORTHO05D009214 2.4e-54 216.1 199 61.3
Dinv21175 Davidia involucrata HOM05D007282 ORTHO05D009214 7.0e-54 214.5 198 59.1
Gohir.D09G133600 Gossypium hirsutum HOM05D007282 ORTHO05D009214 1.6e-53 213.4 140 75.0
Hma1.2p1_0769F.1_g215750 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 2.0e-53 213.0 201 60.7
Gorai.006G153100 Gossypium raimondii HOM05D007282 ORTHO05D009214 2.7e-53 212.6 140 74.3
PGR142G4217 Punica granatum HOM05D007282 ORTHO05D009214 2.7e-53 212.6 141 75.2
Gohir.A09G141100 Gossypium hirsutum HOM05D007282 ORTHO05D009214 1.3e-52 210.3 140 74.3
Nn6g34828 Nelumbo nucifera HOM05D007282 ORTHO05D009214 1.3e-52 210.3 141 73.8
QL07p038317 Quercus lobata HOM05D007282 ORTHO05D009214 1.3e-52 210.3 139 74.8
Atru.chr8.1455 Acer truncatum HOM05D007282 ORTHO05D009214 1.7e-52 209.9 153 73.2
CiPaw.09G016500 Carya illinoinensis HOM05D007282 ORTHO05D009214 2.3e-52 209.5 149 71.1
Potri.006G210000 Populus trichocarpa HOM05D007282 ORTHO05D009214 5.0e-52 208.4 208 56.7
Migut.J01006 Erythranthe guttata HOM05D007282 ORTHO05D009214 6.6e-52 208.0 207 53.1
TAR623G0904 Trochodendron aralioides HOM05D007282 ORTHO05D009214 6.6e-52 208.0 142 71.8
Thecc.05G094100 Theobroma cacao HOM05D007282 ORTHO05D009214 1.9e-51 206.5 128 77.3
Duzib093G1732 Durio zibethinus HOM05D007282 ORTHO05D009214 2.5e-51 206.1 139 73.4
vmacro07443 Vaccinium macrocarpon HOM05D007282 ORTHO05D009214 7.3e-51 204.5 204 55.9
Cpa.g.sc104.101 Carica papaya HOM05D007282 ORTHO05D009214 1.2e-50 203.8 144 71.5
SalBow3G4659 Salvia bowleyana HOM05D007282 ORTHO05D009214 1.2e-50 203.8 170 61.2
TWI53G0193 Tripterygium wilfordii HOM05D007282 ORTHO05D009214 1.6e-50 203.4 144 70.8
Peaxi162Scf00069g00612 Petunia axillaris HOM05D007282 ORTHO05D009214 2.1e-50 203.0 145 71.0
CSS0014712 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 2.8e-50 202.6 136 72.1
CSS0036453 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 2.8e-50 202.6 136 72.1
Manes.08G027500 Manihot esculenta HOM05D000972 ORTHO05D007713 2.8e-50 202.6 140 72.9
CANSAT64G2352 Cannabis sativa HOM05D007282 ORTHO05D009214 6.2e-50 201.4 141 73.0
Lj2A142T14 Lonicera japonica HOM05D007282 ORTHO05D009214 1.4e-49 200.3 123 78.0
FAN02G3890 Fragaria x ananassa HOM05D007282 ORTHO05D009214 2.3e-49 199.5 195 58.5
Eucgr.K02566 Eucalyptus grandis HOM05D007282 ORTHO05D009214 3.1e-49 199.1 123 78.0
Prupe.7G102300 Prunus persica HOM05D007282 ORTHO05D009214 5.2e-49 198.4 183 61.2
ClCG04G010160 Citrullus lanatus HOM05D007282 ORTHO05D009214 6.8e-49 198.0 178 62.4
Haze_19645 Corylus avellana HOM05D007282 ORTHO05D009214 8.9e-49 197.6 145 73.8
MSTRG.19274 Avicennia marina HOM05D007282 ORTHO05D009214 1.5e-48 196.8 142 66.2
CsaV3_6G040780 Cucumis sativus L. HOM05D007282 ORTHO05D009214 3.4e-48 195.7 142 71.1
MELO3C024557.2 Cucumis melo HOM05D007282 ORTHO05D009214 4.4e-48 195.3 179 60.9
FvH4_6g19360 Fragaria vesca HOM05D007282 ORTHO05D009214 4.4e-48 195.3 195 59.0
Aqoxy4G02730 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 7.5e-48 194.5 147 68.0
SGA_v2.0_scaffold31G12895 Striga asiatica HOM05D007282 ORTHO05D009214 1.7e-47 193.4 148 66.2
Rhsim03G0070300 Rhododendron simsii HOM05D007282 ORTHO05D009214 2.2e-47 193.0 199 56.3
HPP92_001104 Vanilla planifolia HOM05D007282 ORTHO05D009214 2.2e-47 193.0 123 74.0
ECA248G2482 Erigeron canadensis HOM05D005132 ORTHO05D005823 2.9e-47 192.6 140 68.6
Zm00001eb366810 Zea mays HOM05D007282 ORTHO05D009214 3.7e-47 192.2 138 66.7
PGSC0003DMG400008863 Solanum tuberosum HOM05D007282 ORTHO05D009214 4.9e-47 191.8 145 69.7
Lsat_1_v5_gn_5_165601 Lactuca sativa HOM05D007282 ORTHO05D009214 6.4e-47 191.4 197 53.8
RcHm_v2.0_Chr3g0474621 Rosa chinensis HOM05D007282 ORTHO05D009214 1.1e-46 190.7 189 58.7
Sed0020389 Sechium edule HOM05D007282 ORTHO05D009214 1.1e-46 190.7 143 69.2
HanXRQChr13g0390101 Helianthus annuus HOM05D007282 ORTHO05D009214 3.2e-46 189.1 132 68.9
ATR0820G206 Amborella trichopoda HOM05D007282 ORTHO05D009214 4.1e-46 188.7 141 66.7
Sopen09g004860 Solanum pennellii HOM05D007282 ORTHO05D009214 4.1e-46 188.7 166 61.4
Solyc09g010120.2 Solanum lycopersicum HOM05D007282 ORTHO05D009214 9.2e-46 187.6 143 67.8
Os01g0862200 Oryza sativa ssp. japonica HOM05D007282 ORTHO05D009214 2.1e-45 186.4 138 63.8
GSVIVG01033882001 Vitis vinifera HOM05D007282 ORTHO05D009214 2.1e-45 186.4 114 78.1
Cc00_g15490 Coffea canephora HOM05D007282 ORTHO05D009214 4.6e-45 185.3 114 78.1
Sc02g0000410 Simmondsia chinensis HOM05D007282 ORTHO05D009214 4.6e-45 185.3 200 51.5
PSO384G4616 Papaver somniferum HOM05D007282 ORTHO05D009214 1.7e-44 183.3 162 59.9
PSO339G4969 Papaver somniferum HOM05D007282 ORTHO05D009214 3.0e-44 182.6 182 55.5
arahy.Tifrunner.gnm1.ann1.LMCN1R Arachis hypogaea HOM05D007282 ORTHO05D009214 8.6e-44 181.0 203 54.7
arahy.Tifrunner.gnm1.ann1.TUP4W7 Arachis hypogaea HOM05D007282 ORTHO05D009214 8.6e-44 181.0 203 54.7
CDE08G0791 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 5.6e-43 178.3 122 70.5
BcaC02g07630 Brassica carinata HOM05D007282 ORTHO05D009214 1.2e-42 177.2 126 66.7
BolC4t27996H Brassica oleracea HOM05D007282 ORTHO05D009214 1.2e-42 177.2 126 66.7
Thhalv10017280m.g Eutrema salsugineum HOM05D007282 ORTHO05D009214 1.2e-42 177.2 163 57.1
A04p27670 Brassica napus HOM05D000972 ORTHO05D009214 2.8e-42 176.0 126 65.9
BraA04t18262Z Brassica rapa HOM05D000972 ORTHO05D001783 2.8e-42 176.0 126 65.9
AL4G32230 Arabidopsis lyrata HOM05D007282 ORTHO05D009214 3.6e-42 175.6 120 71.7
Sp4g18380 Schrenkiella parvula HOM05D007282 ORTHO05D009214 3.6e-42 175.6 124 66.9
BcaB06g28919 Brassica carinata HOM05D000972 ORTHO05D001783 4.7e-42 175.3 126 65.1
AT2G36145 Arabidopsis thaliana HOM05D007282 ORTHO05D009214 6.2e-42 174.9 121 70.2
Aa31LG5G21280 Aethionema arabicum HOM05D007282 ORTHO05D009214 1.8e-41 173.3 182 51.1
CARHR130380 Cardamine hirsuta HOM05D007282 ORTHO05D009214 5.2e-41 171.8 121 69.4
CDE02G2307 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 2.6e-40 169.5 135 65.2
THA.LOC104799754 Tarenaya hassleriana HOM05D007282 ORTHO05D009214 2.6e-40 169.5 140 63.6
Carub.0004s1791 Capsella rubella HOM05D007282 ORTHO05D009214 7.6e-40 167.9 121 66.9
CDE08G0228 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 7.6e-40 167.9 121 69.4
DCAR_013409 Daucus carota HOM05D007282 ORTHO05D009214 2.9e-39 166.0 119 68.1
AUR62036998 Chenopodium quinoa HOM05D007282 ORTHO05D009214 3.8e-39 165.6 144 59.0
C04p65190 Brassica napus HOM05D007282 ORTHO05D009214 1.6e-37 160.2 130 61.5
Hma1.2p1_0769F.1_g215760 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 7.8e-37 157.9 136 63.2
Hund03936 Selenicereus undatus HOM05D007282 ORTHO05D009214 1.3e-36 157.1 196 45.9
COL.COLO4_03547 Corchorus olitorius HOM05D007282 ORTHO05D009214 3.9e-36 155.6 143 60.1
Nitab4.5_0001875g0020 Nicotiana tabacum HOM05D007282 ORTHO05D009214 2.5e-35 152.9 187 49.7
AUR62006220 Chenopodium quinoa HOM05D007282 ORTHO05D009214 3.3e-35 152.5 144 56.9
Pp3c14_14160 Physcomitrium patens HOM05D007282 ORTHO05D009214 1.5e-32 143.7 118 57.6
AagrBONN_evm.TU.Sc2ySwM_344.5307 Anthoceros agrestis HOM05D007282 ORTHO05D009214 3.2e-30 136.0 122 55.7
EL10Ac7g16881 Beta vulgaris HOM05D007282 ORTHO05D009214 4.2e-30 135.6 203 43.3
SMO353G0249 Selaginella moellendorffii HOM05D007282 ORTHO05D009214 5.4e-30 135.2 123 54.5
MD12G1029300 Malus domestica HOM05D007282 ORTHO05D009214 1.7e-28 130.2 82 78.0
MD14G1029600 Malus domestica HOM05D007282 ORTHO05D009214 1.5e-27 127.1 82 76.8
Mapoly0153s0036 Marchantia polymorpha HOM05D007282 ORTHO05D009214 5.6e-27 125.2 114 53.5
Aqoxy1G00013 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 3.1e-25 119.4 69 79.7
Aqoxy2G01255 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 9.0e-25 117.9 96 62.5
DCAR_031561 Daucus carota HOM05D007282 ORTHO05D009214 1.1e-17 94.4 80 57.5
Glyma.02G201900 Glycine max HOM05D007282 ORTHO05D009214 1.2e-13 80.9 101 50.5
VMungo0720G2657 Vigna mungo HOM05D007282 ORTHO05D009214 6.0e-13 78.6 107 45.8
Actinidia05405 Actinidia chinensis HOM05D005132 ORTHO05D005823 4.0e-09 65.9 50 62.0
TAR369G0436 Trochodendron aralioides HOM05D007282 ORTHO05D009214 2.2e-07 60.1 52 55.8
MCO16G381 Micromonas commoda HOM05D007282 ORTHO05D009214 7.1e-06 55.1 70 38.6


User provided reference genes

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