Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_06610_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 2.8e-61 238.4 122 100.0
Ca_30727_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 2.8e-61 238.4 122 100.0
TPR.G1088 Trifolium pratense HOM05D007296 ORTHO05D009201 8.0e-48 193.7 121 82.6
Psat3g172000 Pisum sativum HOM05D007296 ORTHO05D009201 1.2e-46 189.9 123 81.3
Medtr7g033080 Medicago truncatula HOM05D007296 ORTHO05D009201 2.0e-46 189.1 122 82.0
Lj1g0014101 Lotus japonicus HOM05D007296 ORTHO05D009201 6.4e-37 157.5 124 67.7
Glyma.16G068200 Glycine max HOM05D007296 ORTHO05D009201 9.2e-36 153.7 121 70.2
Lalb_Chr22g0360681 Lupinus albus HOM05D007296 ORTHO05D009201 4.6e-35 151.4 115 71.3
Glyma.19G078800 Glycine max HOM05D007296 ORTHO05D009201 3.9e-34 148.3 122 67.2
VMungo1383G0878 Vigna mungo HOM05D007296 ORTHO05D009201 5.1e-34 147.9 122 64.8
Phvul.008G151600 Phaseolus vulgaris HOM05D007296 ORTHO05D009201 1.1e-28 130.2 98 68.4
Glyma.19G051600 Glycine max HOM05D007296 ORTHO05D009201 1.4e-28 129.8 124 57.3
Glyma.05G115500 Glycine max HOM05D007296 ORTHO05D009201 4.6e-27 124.8 124 54.8
Phvul.004G061700 Phaseolus vulgaris HOM05D007296 ORTHO05D009201 3.9e-26 121.7 127 55.1
QL02p073829 Quercus lobata HOM05D007296 ORTHO05D009201 4.3e-25 118.2 135 49.6
Haze_14767 Corylus avellana HOM05D007296 ORTHO05D009201 9.6e-25 117.1 127 50.4
Cfa007330 Carpinus fangiana HOM05D007296 ORTHO05D009201 2.1e-24 115.9 127 48.8
CiPaw.03G046500 Carya illinoinensis HOM05D007296 ORTHO05D009201 3.6e-24 115.2 116 53.4
Potri.001G342100 Populus trichocarpa HOM05D007296 ORTHO05D009201 1.4e-23 113.2 107 54.2
Ciclev10017118m.g Citrus clementina HOM05D007296 ORTHO05D009201 5.3e-23 111.3 115 53.0
CiPaw.04G030100 Carya illinoinensis HOM05D007296 ORTHO05D009201 2.6e-22 109.0 117 47.9
Manes.15G152600 Manihot esculenta HOM05D007296 ORTHO05D009201 7.6e-22 107.5 115 53.0
Atru.chr6.2441 Acer truncatum HOM05D007296 ORTHO05D009201 9.9e-22 107.1 110 55.5
Nn4g22550 Nelumbo nucifera HOM05D007296 ORTHO05D009201 1.1e-20 103.6 116 49.1
CSS0008661 Camellia sinensis var. sinensis HOM05D007296 ORTHO05D009201 1.9e-20 102.8 109 51.4
Thecc.04G021100 Theobroma cacao HOM05D007296 ORTHO05D009201 7.1e-20 100.9 112 50.9
TAR371G0818 Trochodendron aralioides HOM05D007296 ORTHO05D009201 7.1e-20 100.9 117 47.0
Dinv33417 Davidia involucrata HOM05D007296 ORTHO05D009201 1.6e-19 99.8 113 48.7
Duzib187G0331 Durio zibethinus HOM05D007296 ORTHO05D009201 2.7e-19 99.0 110 51.8
Hma1.2p1_0818F.1_g223340 Hydrangea macrophylla HOM05D007296 ORTHO05D009201 5.1e-18 94.7 107 52.3
Gohir.A09G030400 Gossypium hirsutum HOM05D007296 ORTHO05D009201 1.1e-17 93.6 112 46.4
TWI56G0033 Tripterygium wilfordii HOM05D007296 ORTHO05D009201 2.5e-17 92.4 121 49.6
Aqoxy5G03689 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 3.3e-17 92.0 112 46.4
Gohir.D09G030000 Gossypium hirsutum HOM05D007296 ORTHO05D009201 4.3e-17 91.7 112 46.4
PSO017G3033 Papaver somniferum HOM05D007296 ORTHO05D009201 4.3e-17 91.7 123 40.7
Cpa.g.sc130.72 Carica papaya HOM05D007296 ORTHO05D009201 5.6e-17 91.3 143 40.6
SalBow1G6940 Salvia bowleyana HOM05D007296 ORTHO05D009201 5.6e-17 91.3 109 47.7
Nn3g16657 Nelumbo nucifera HOM05D007296 ORTHO05D009201 1.6e-16 89.7 111 43.2
Prupe.3G295100 Prunus persica HOM05D007296 ORTHO05D009201 2.1e-16 89.4 77 59.7
DCAR_021738 Daucus carota HOM05D000631 ORTHO05D000524 4.8e-16 88.2 109 44.0
Aqoxy7G03797 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 8.1e-16 87.4 113 44.2
Eucgr.I01721 Eucalyptus grandis HOM05D007296 ORTHO05D009201 3.1e-15 85.5 118 42.4
TAR374G0807 Trochodendron aralioides HOM05D007296 ORTHO05D009201 4.0e-15 85.1 101 44.6
Cc02_g32290 Coffea canephora HOM05D007296 ORTHO05D009201 5.3e-15 84.7 101 47.5
Ciclev10022926m.g Citrus clementina HOM05D007296 ORTHO05D009201 9.0e-15 84.0 106 45.3
Sc16g0004380 Simmondsia chinensis HOM05D007296 ORTHO05D009201 1.2e-14 83.6 113 47.8
Lsat_1_v5_gn_0_6101 Lactuca sativa HOM05D007296 ORTHO05D009201 1.5e-14 83.2 114 47.4
ClCG09G019420 Citrullus lanatus HOM05D007296 ORTHO05D009201 2.0e-14 82.8 121 41.3
ATR0199G042 Amborella trichopoda HOM05D007296 ORTHO05D009201 2.6e-14 82.4 108 42.6
Sabra15G0109100 Salix brachista HOM05D000631 ORTHO05D000524 4.5e-14 81.6 114 38.6
Aqoxy3G01286 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 9.9e-14 80.5 109 41.3
Lsat_1_v5_gn_2_91081 Lactuca sativa HOM05D007296 ORTHO05D009201 1.3e-13 80.1 102 46.1
SGA_v2.0_scaffold47G17522 Striga asiatica HOM05D000631 ORTHO05D000524 1.7e-13 79.7 103 47.6
Ah.12g055220 Amaranthus hybridus HOM05D007296 ORTHO05D009201 3.8e-13 78.6 123 41.5
CsaV3_5G026960 Cucumis sativus L. HOM05D007296 ORTHO05D009201 8.4e-13 77.4 128 40.6
MELO3C021597.2 Cucumis melo HOM05D007296 ORTHO05D009201 1.1e-12 77.0 125 41.6
FAN02G1968 Fragaria x ananassa HOM05D007296 ORTHO05D009201 1.1e-12 77.0 122 45.1
PGR142G0831 Punica granatum HOM05D007296 ORTHO05D009201 1.1e-12 77.0 108 45.4
ECA246G1504 Erigeron canadensis HOM05D007296 ORTHO05D009201 1.4e-12 76.6 107 44.9
CiPaw.11G015200 Carya illinoinensis HOM05D007296 ORTHO05D009201 1.9e-12 76.3 107 40.2
FAN09G0682 Fragaria x ananassa HOM05D007296 ORTHO05D009201 1.9e-12 76.3 122 45.1
Ca_30679_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 3.2e-12 75.5 102 43.1
CAN.G473.34 Capsicum annuum HOM05D007296 ORTHO05D009201 4.2e-12 75.1 113 38.9
MBI10_g42976_MAGBIO Magnolia biondii HOM05D007296 ORTHO05D009201 4.2e-12 75.1 114 43.9
DCAR_015066 Daucus carota HOM05D007296 ORTHO05D009201 7.1e-12 74.3 108 41.7
Lj4g0005296 Lotus japonicus HOM05D007296 ORTHO05D009201 1.2e-11 73.6 108 43.5
Sed0024202 Sechium edule HOM05D007296 ORTHO05D009201 1.2e-11 73.6 92 45.7
EL10Ac5g12075 Beta vulgaris HOM05D007296 ORTHO05D009201 1.6e-11 73.2 118 41.5
FAN05G3275 Fragaria x ananassa HOM05D007296 ORTHO05D009201 1.6e-11 73.2 124 43.5
FAN14G0692 Fragaria x ananassa HOM05D007296 ORTHO05D009201 2.1e-11 72.8 122 43.4
Manes.14G057736 Manihot esculenta HOM05D007296 ORTHO05D009201 2.7e-11 72.4 104 42.3
PGSC0003DMG400012614 Solanum tuberosum HOM05D007296 ORTHO05D009201 2.7e-11 72.4 120 35.8
FvH4_6g51980 Fragaria vesca HOM05D007296 ORTHO05D009201 4.6e-11 71.6 122 44.3
Lalb_Chr07g0183081 Lupinus albus HOM05D007296 ORTHO05D009201 4.6e-11 71.6 114 39.5
Prupe.5G162900 Prunus persica HOM05D007296 ORTHO05D009201 4.6e-11 71.6 117 37.6
Thecc.03G117800 Theobroma cacao HOM05D007296 ORTHO05D009201 4.6e-11 71.6 102 40.2
SGA_v2.0_scaffold18G08254 Striga asiatica HOM05D007296 ORTHO05D009201 1.8e-10 69.7 114 38.6
SGA_v2.0_scaffold135G34923 Striga asiatica HOM05D007296 ORTHO05D009201 6.7e-10 67.8 107 40.2
A10p24110 Brassica napus HOM05D007296 ORTHO05D009201 1.1e-09 67.0 100 42.0
BraA10t44476Z Brassica rapa HOM05D007296 ORTHO05D009201 1.1e-09 67.0 100 42.0
BolC9t59112H Brassica oleracea HOM05D007296 ORTHO05D009201 1.9e-09 66.2 100 41.0
RcHm_v2.0_Chr2g0173451 Rosa chinensis HOM05D007296 ORTHO05D009201 1.9e-09 66.2 117 43.6
Aa31LG11G15190 Aethionema arabicum HOM05D007296 ORTHO05D009201 3.3e-09 65.5 62 61.3
Gorai.006G035000 Gossypium raimondii HOM05D007296 ORTHO05D009201 3.3e-09 65.5 112 34.8
C09p62750 Brassica napus HOM05D007296 ORTHO05D009201 4.3e-09 65.1 100 40.0
Gohir.A07G055400 Gossypium hirsutum HOM05D007296 ORTHO05D009201 4.3e-09 65.1 105 37.1
CARHR198900 Cardamine hirsuta HOM05D007296 ORTHO05D009201 5.6e-09 64.7 108 44.4
Gohir.D07G059700 Gossypium hirsutum HOM05D007296 ORTHO05D009201 7.4e-09 64.3 105 37.1
Gorai.001G063200 Gossypium raimondii HOM05D007296 ORTHO05D009201 7.4e-09 64.3 105 37.1
THA.LOC104821171 Tarenaya hassleriana HOM05D007296 ORTHO05D009201 7.4e-09 64.3 105 40.0
unitig_0.g1597 Utricularia gibba HOM05D004929 ORTHO05D006492 9.6e-09 63.9 117 38.5
Thhalv10014918m.g Eutrema salsugineum HOM05D007296 ORTHO05D009201 1.3e-08 63.5 95 42.1
Carub.0006s1259 Capsella rubella HOM05D007296 ORTHO05D009201 2.1e-08 62.8 104 42.3
Migut.H00030 Erythranthe guttata HOM05D007296 ORTHO05D009201 2.1e-08 62.8 145 35.2
Migut.K01416 Erythranthe guttata HOM05D007296 ORTHO05D009201 2.1e-08 62.8 113 40.7
Sopen02g038130 Solanum pennellii HOM05D007296 ORTHO05D009201 2.8e-08 62.4 114 34.2
BcaB08g36986 Brassica carinata HOM05D007296 ORTHO05D009201 1.1e-07 60.5 42 64.3
COL.COLO4_30221 Corchorus olitorius HOM05D007296 ORTHO05D009201 1.1e-07 60.5 102 37.3
QL10p006090 Quercus lobata HOM05D007296 ORTHO05D009201 1.1e-07 60.5 97 38.1
AL6G25130 Arabidopsis lyrata HOM05D007296 ORTHO05D009201 1.4e-07 60.1 104 43.3
SalBow7G1031 Salvia bowleyana HOM05D007296 ORTHO05D009201 1.4e-07 60.1 95 38.9
Sp6g29610 Schrenkiella parvula HOM05D007296 ORTHO05D009201 1.8e-07 59.7 89 42.7
VMungo1215G1852 Vigna mungo HOM05D007296 ORTHO05D009201 2.4e-07 59.3 110 32.7
AT5G14410 Arabidopsis thaliana HOM05D007296 ORTHO05D009201 3.1e-07 58.9 104 42.3
Solyc02g093525.1 Solanum lycopersicum HOM05D007296 ORTHO05D009201 9.0e-07 57.4 114 32.5
COL.COLO4_29188 Corchorus olitorius HOM05D005949 ORTHO05D006945 2.0e-06 56.2 70 45.7
Os01g0938400 Oryza sativa ssp. japonica HOM05D024678 ORTHO05D025976 2.6e-06 55.8 58 50.0
QL10p006100 Quercus lobata HOM05D007296 ORTHO05D009201 2.6e-06 55.8 93 38.7


User provided reference genes

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