Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_30697_v3 Cicer arietinum L. HOM05D006752 ORTHO05D008597 9.3e-67 256.9 127 100.0
Medtr2g050180 Medicago truncatula HOM05D006752 ORTHO05D008597 1.4e-43 179.9 112 83.9
TPR.G10362 Trifolium pratense HOM05D006752 ORTHO05D008597 9.4e-43 177.2 111 82.0
Psat1g025400 Pisum sativum HOM05D006752 ORTHO05D008597 1.3e-39 166.8 111 77.5
Lalb_Chr11g0071961 Lupinus albus HOM05D006752 ORTHO05D008597 6.3e-39 164.5 124 70.2
Lj1g0009545 Lotus japonicus HOM05D006752 ORTHO05D008597 3.1e-38 162.2 124 68.5
arahy.Tifrunner.gnm1.ann1.TG1F9L Arachis hypogaea HOM05D006752 ORTHO05D008597 1.0e-36 157.1 123 69.9
arahy.Tifrunner.gnm1.ann1.CJP391 Arachis hypogaea HOM05D006752 ORTHO05D008597 6.5e-36 154.5 123 67.5
Glyma.06G211500 Glycine max HOM05D006752 ORTHO05D008597 1.0e-33 147.1 115 70.4
CSS0016306 Camellia sinensis var. sinensis HOM05D006752 ORTHO05D008597 1.4e-33 146.7 122 59.8
CSS0021299 Camellia sinensis var. sinensis HOM05D006752 ORTHO05D008597 3.0e-33 145.6 125 59.2
VMungo1309G1199 Vigna mungo HOM05D006752 ORTHO05D008597 8.8e-33 144.1 126 65.1
Actinidia20330 Actinidia chinensis HOM05D006752 ORTHO05D008597 2.2e-31 139.4 126 60.3
CiPaw.04G167500 Carya illinoinensis HOM05D006752 ORTHO05D008597 2.8e-31 139.0 115 59.1
GSVIVG01015454001 Vitis vinifera HOM05D006752 ORTHO05D008597 6.3e-31 137.9 112 63.4
Phvul.009G200000 Phaseolus vulgaris HOM05D006752 ORTHO05D008597 3.1e-30 135.6 114 67.5
Haze_25667 Corylus avellana HOM05D006752 ORTHO05D008597 9.1e-30 134.0 95 71.6
Atru.chr7.1279 Acer truncatum HOM05D006752 ORTHO05D008597 1.2e-29 133.7 124 57.3
QL02p086379 Quercus lobata HOM05D006752 ORTHO05D008597 5.9e-29 131.3 116 59.5
Cpa.g.sc23.163 Carica papaya HOM05D006752 ORTHO05D008597 6.5e-28 127.9 122 57.4
Rhsim01G0090500 Rhododendron simsii HOM05D006752 ORTHO05D008597 6.5e-28 127.9 131 57.3
FvH4_1g04220 Fragaria vesca HOM05D006752 ORTHO05D008597 1.5e-27 126.7 115 58.3
FAN19G2061 Fragaria x ananassa HOM05D006752 ORTHO05D008597 1.5e-27 126.7 115 58.3
FAN28G1533 Fragaria x ananassa HOM05D006752 ORTHO05D008597 4.2e-27 125.2 115 58.3
FAN26G3101 Fragaria x ananassa HOM05D006752 ORTHO05D008597 5.5e-27 124.8 115 58.3
ClCG06G010500 Citrullus lanatus HOM05D006752 ORTHO05D008597 7.2e-27 124.4 114 57.0
Thecc.09G116900 Theobroma cacao HOM05D006752 ORTHO05D008597 7.2e-27 124.4 124 54.0
Prupe.7G235200 Prunus persica HOM05D006752 ORTHO05D008597 9.4e-27 124.0 117 59.8
RcHm_v2.0_Chr2g0089761 Rosa chinensis HOM05D006752 ORTHO05D008597 9.4e-27 124.0 115 57.4
PGR142G0135 Punica granatum HOM05D006752 ORTHO05D008597 8.0e-26 120.9 118 55.9
EL10Ac8g18558 Beta vulgaris HOM05D006752 ORTHO05D008597 1.0e-25 120.6 124 57.3
Ah.14g081300 Amaranthus hybridus HOM05D006752 ORTHO05D008597 1.4e-25 120.2 124 53.2
PSO782G3782 Papaver somniferum HOM05D006752 ORTHO05D008597 4.0e-25 118.6 125 56.0
AUR62033416 Chenopodium quinoa HOM05D006752 ORTHO05D008597 1.2e-24 117.1 113 55.8
AUR62011040 Chenopodium quinoa HOM05D006393 ORTHO05D008088 1.5e-24 116.7 113 55.8
TAR383G0518 Trochodendron aralioides HOM05D004738 ORTHO05D006439 1.5e-24 116.7 124 50.8
PGSC0003DMG400020684 Solanum tuberosum HOM05D006752 ORTHO05D008597 3.4e-24 115.5 122 54.9
Manes.03G066500 Manihot esculenta HOM05D006752 ORTHO05D008597 5.7e-24 114.8 125 52.0
Sc08g0007040 Simmondsia chinensis HOM05D006752 ORTHO05D008597 9.8e-24 114.0 125 50.4
Sed0015690 Sechium edule HOM05D006752 ORTHO05D008597 1.3e-23 113.6 114 55.3
Solyc12g006710.3 Solanum lycopersicum HOM05D006752 ORTHO05D008597 1.3e-23 113.6 126 54.8
Sopen12g002660 Solanum pennellii HOM05D006752 ORTHO05D008597 1.7e-23 113.2 126 54.8
Actinidia09396 Actinidia chinensis HOM05D006393 ORTHO05D008088 2.2e-23 112.8 101 63.4
Nitab4.5_0005520g0050 Nicotiana tabacum HOM05D006752 ORTHO05D008597 2.2e-23 112.8 120 52.5
CAN.G377.33 Capsicum annuum HOM05D006752 ORTHO05D008597 2.8e-23 112.5 123 52.8
MD02G1061400 Malus domestica HOM05D006752 ORTHO05D008597 3.7e-23 112.1 113 56.6
DCAR_010437 Daucus carota HOM05D006752 ORTHO05D008597 8.3e-23 110.9 125 49.6
Gorai.010G068100 Gossypium raimondii HOM05D006752 ORTHO05D008597 1.1e-22 110.5 123 50.4
Sc08g0007050 Simmondsia chinensis HOM05D006752 ORTHO05D008597 1.4e-22 110.2 125 48.8
Nn8g39294 Nelumbo nucifera HOM05D006752 ORTHO05D008597 2.4e-22 109.4 112 54.5
Oeu018257.1 Olea europaea HOM05D006752 ORTHO05D008597 2.4e-22 109.4 123 49.6
vmacro20678 Vaccinium macrocarpon HOM05D006752 ORTHO05D008597 3.1e-22 109.0 94 62.8
Gohir.D06G058000 Gossypium hirsutum HOM05D006752 ORTHO05D008597 4.1e-22 108.6 124 49.2
Potri.018G073100 Populus trichocarpa HOM05D006752 ORTHO05D008597 4.1e-22 108.6 125 48.8
Cc06_g09220 Coffea canephora HOM05D006752 ORTHO05D008597 5.4e-22 108.2 124 52.4
ECA234G0120 Erigeron canadensis HOM05D006752 ORTHO05D008597 1.6e-21 106.7 124 50.0
MBI01_g13570_MAGBIO Magnolia biondii HOM05D006752 ORTHO05D008597 2.7e-21 105.9 109 54.1
SGA_v2.0_scaffold229G43313 Striga asiatica HOM05D006752 ORTHO05D008597 2.7e-21 105.9 110 53.6
Nitab4.5_0001164g0060 Nicotiana tabacum HOM05D006752 ORTHO05D008597 5.9e-21 104.8 121 54.5
Gohir.A06G059800 Gossypium hirsutum HOM05D006752 ORTHO05D008597 1.0e-20 104.0 122 49.2
MELO3C025306.2 Cucumis melo HOM05D006752 ORTHO05D008597 1.3e-20 103.6 114 50.0
ATR0815G047 Amborella trichopoda HOM05D006752 ORTHO05D008597 1.7e-20 103.2 128 50.0
TWI34G0637 Tripterygium wilfordii HOM05D006752 ORTHO05D008597 1.7e-20 103.2 94 55.3
CANSAT56G2958 Cannabis sativa HOM05D006752 ORTHO05D008597 3.8e-20 102.1 116 53.4
HanXRQChr10g0317451 Helianthus annuus HOM05D006752 ORTHO05D008597 3.8e-20 102.1 122 45.1
Duzib168G0331 Durio zibethinus HOM05D006752 ORTHO05D008597 5.0e-20 101.7 119 47.1
SalBow6G5676 Salvia bowleyana HOM05D006752 ORTHO05D008597 5.0e-20 101.7 123 48.0
Eucgr.C01084 Eucalyptus grandis HOM05D006752 ORTHO05D008597 6.6e-20 101.3 108 52.8
Os01g0178100 Oryza sativa ssp. japonica HOM05D006752 ORTHO05D008597 6.6e-20 101.3 111 52.3
Zm00001eb336920 Zea mays HOM05D006752 ORTHO05D008597 8.6e-20 100.9 118 53.4
Lj7C639G3 Lonicera japonica HOM05D006752 ORTHO05D008597 1.5e-19 100.1 94 60.6
CsaV3_1G030960 Cucumis sativus L. HOM05D006752 ORTHO05D008597 4.2e-19 98.6 114 50.9
Sabra18G0063600 Salix brachista HOM05D006752 ORTHO05D008597 4.2e-19 98.6 125 44.8
THA.LOC104815109 Tarenaya hassleriana HOM05D006752 ORTHO05D008597 5.5e-19 98.2 121 50.4
COL.COLO4_34948 Corchorus olitorius HOM05D006393 ORTHO05D008088 9.5e-19 97.4 87 57.5
Hund09171 Selenicereus undatus HOM05D006752 ORTHO05D008597 9.5e-19 97.4 96 52.1
Dinv41564 Davidia involucrata HOM05D006752 ORTHO05D008088 1.2e-18 97.1 93 58.1
HPP92_008698 Vanilla planifolia HOM05D006752 ORTHO05D008597 1.6e-18 96.7 123 46.3
Aqoxy7G01881 Aquilegia oxysepala HOM05D006752 ORTHO05D008597 2.8e-18 95.9 107 54.2
AT5G19950 Arabidopsis thaliana HOM05D006752 ORTHO05D008597 4.0e-17 92.0 125 47.2
Peaxi162Scf00984g00260 Petunia axillaris HOM05D006752 ORTHO05D008597 4.0e-17 92.0 127 47.2
AL6G31480 Arabidopsis lyrata HOM05D006752 ORTHO05D008597 8.9e-17 90.9 134 45.5
MSTRG.19609 Avicennia marina HOM05D006752 ORTHO05D008597 8.9e-17 90.9 124 46.0
A10p19780 Brassica napus HOM05D006752 ORTHO05D008597 3.4e-16 89.0 126 46.8
BraA10t44054Z Brassica rapa HOM05D006752 ORTHO05D008597 3.4e-16 89.0 126 46.8
BcaC04g19401 Brassica carinata HOM05D006752 ORTHO05D008597 9.8e-16 87.4 121 47.1
C09p56100 Brassica napus HOM05D006752 ORTHO05D008597 9.8e-16 87.4 121 47.1
Thhalv10013545m.g Eutrema salsugineum HOM05D006752 ORTHO05D008597 1.3e-15 87.0 130 43.8
Carub.0006s1832 Capsella rubella HOM05D006752 ORTHO05D008597 1.7e-15 86.7 125 44.8
SEGI_05783 Sequoiadendron giganteum HOM05D006752 ORTHO05D008597 6.3e-15 84.7 130 45.4
BolC9t58477H Brassica oleracea HOM05D006752 ORTHO05D008597 8.3e-15 84.3 121 46.3
CARHR192900 Cardamine hirsuta HOM05D006752 ORTHO05D008597 1.8e-14 83.2 126 45.2
Sp6g24430 Schrenkiella parvula HOM05D006752 ORTHO05D008597 5.4e-14 81.6 123 44.7
BcaB08g36551 Brassica carinata HOM05D006752 ORTHO05D008597 2.7e-13 79.3 121 44.6
Migut.J01179 Erythranthe guttata HOM05D006752 ORTHO05D008597 2.7e-13 79.3 124 43.5
Aa31LG8G9350 Aethionema arabicum HOM05D006752 ORTHO05D008597 1.2e-10 70.5 134 40.3
Lsat_1_v5_gn_5_99240 Lactuca sativa HOM05D006752 ORTHO05D008597 1.0e-09 67.4 117 38.5
TWI32G0100 Tripterygium wilfordii HOM05D006752 ORTHO05D008597 6.8e-09 64.7 108 38.9
Mapoly0040s0028 Marchantia polymorpha HOM05D006752 ORTHO05D008597 2.9e-07 59.3 144 38.9
CDE02G1475 Ceratophyllum demersum HOM05D006752 ORTHO05D008597 3.7e-07 58.9 61 49.2
Pp3c9_1660 Physcomitrium patens HOM05D006752 ORTHO05D008597 3.2e-06 55.8 115 37.4
Pp3c9_1669 Physcomitrium patens HOM05D006752 ORTHO05D008597 3.2e-06 55.8 115 37.4
MD02G1040500 Malus domestica HOM05D006752 ORTHO05D008597 9.2e-06 54.3 80 45.0


User provided reference genes

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