Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_30652_v3 Cicer arietinum L. HOM05D004846 ORTHO05D005630 2.9e-38 161.4 81 100.0
Psat3g169160 Pisum sativum HOM05D004846 ORTHO05D005630 4.7e-36 154.1 81 93.8
TPR.G9064 Trifolium pratense HOM05D004846 ORTHO05D005630 4.7e-36 154.1 81 93.8
Medtr7g037280 Medicago truncatula HOM05D004846 ORTHO05D005630 6.1e-36 153.7 81 92.6
Glyma.16G063300 Glycine max HOM05D004846 ORTHO05D005630 1.8e-35 152.1 81 91.4
Glyma.19G082100 Glycine max HOM05D004846 ORTHO05D005630 1.8e-35 152.1 81 91.4
Lalb_Chr24g0403411 Lupinus albus HOM05D004846 ORTHO05D005630 2.3e-35 151.8 81 92.6
Lj1g0007607 Lotus japonicus HOM05D004846 ORTHO05D005630 8.8e-35 149.8 81 90.1
Phvul.008G148206 Phaseolus vulgaris HOM05D004846 ORTHO05D005630 1.5e-34 149.1 81 88.9
VMungo1127G0826 Vigna mungo HOM05D004846 ORTHO05D005630 3.4e-34 147.9 81 88.9
Ca_26612_v3 Cicer arietinum L. HOM05D004846 ORTHO05D005630 8.3e-33 143.3 80 90.0
arahy.Tifrunner.gnm1.ann1.EI4BFE Arachis hypogaea HOM05D004846 ORTHO05D005630 1.6e-31 139.0 81 84.0
arahy.Tifrunner.gnm1.ann1.QFX8QT Arachis hypogaea HOM05D004846 ORTHO05D005630 1.6e-31 139.0 81 84.0
CANSAT64G0871 Cannabis sativa HOM05D004846 ORTHO05D005630 9.8e-26 119.8 79 69.6
Atru.chr6.2483 Acer truncatum HOM05D004846 ORTHO05D005630 4.9e-25 117.5 81 71.6
Manes.15G092600 Manihot esculenta HOM05D004846 ORTHO05D005630 3.2e-24 114.8 81 71.6
Sabra16G0218700 Salix brachista HOM05D004846 ORTHO05D005630 9.2e-24 113.2 81 67.9
TAR371G0224 Trochodendron aralioides HOM05D004846 ORTHO05D005630 1.6e-23 112.5 80 68.8
Nn7g36106 Nelumbo nucifera HOM05D004846 ORTHO05D005630 2.7e-23 111.7 81 66.7
PSO210G2938 Papaver somniferum HOM05D004846 ORTHO05D005630 2.7e-23 111.7 81 66.7
GSVIVG01027213001 Vitis vinifera HOM05D004846 ORTHO05D005630 4.6e-23 110.9 81 66.7
Dinv25698 Davidia involucrata HOM05D004846 ORTHO05D005630 5.9e-23 110.5 80 65.0
Potri.001G338000 Populus trichocarpa HOM05D004846 ORTHO05D005630 7.8e-23 110.2 81 65.4
ATR0751G144 Amborella trichopoda HOM05D004846 ORTHO05D005630 1.3e-22 109.4 81 63.0
Sc09g0010530 Simmondsia chinensis HOM05D004846 ORTHO05D005630 1.7e-22 109.0 81 66.7
QL02p072992 Quercus lobata HOM05D004846 ORTHO05D005630 2.3e-22 108.6 81 66.7
CiPaw.03G050100 Carya illinoinensis HOM05D004846 ORTHO05D005630 3.0e-22 108.2 80 66.2
Eucgr.J02281 Eucalyptus grandis HOM05D004846 ORTHO05D005630 3.0e-22 108.2 82 65.9
MD17G1018500 Malus domestica HOM05D004846 ORTHO05D005630 3.0e-22 108.2 81 63.0
Cfa007283 Carpinus fangiana HOM05D004846 ORTHO05D005630 6.6e-22 107.1 81 64.2
PSO210G2073 Papaver somniferum HOM05D004846 ORTHO05D005630 6.6e-22 107.1 76 68.4
Cpa.g.sc130.45 Carica papaya HOM05D004846 ORTHO05D005630 8.6e-22 106.7 81 63.0
Haze_14810 Corylus avellana HOM05D004846 ORTHO05D005630 1.1e-21 106.3 81 65.4
FAN02G3962 Fragaria x ananassa HOM05D004846 ORTHO05D005630 1.5e-21 105.9 81 61.7
FAN05G3122 Fragaria x ananassa HOM05D004846 ORTHO05D005630 1.5e-21 105.9 81 61.7
HanXRQChr02g0054051 Helianthus annuus HOM05D004846 ORTHO05D005630 1.5e-21 105.9 80 60.0
Prupe.3G299200 Prunus persica HOM05D004846 ORTHO05D005630 1.5e-21 105.9 81 63.0
Ciclev10014098m.g Citrus clementina HOM05D004846 ORTHO05D005630 1.9e-21 105.5 81 64.2
MBI15_g38527_MAGBIO Magnolia biondii HOM05D004846 ORTHO05D005630 1.9e-21 105.5 81 63.0
Dinv00597 Davidia involucrata HOM05D004846 ORTHO05D005630 2.5e-21 105.1 81 61.7
MD09G1017700 Malus domestica HOM05D004846 ORTHO05D005630 2.5e-21 105.1 81 61.7
FvH4_6g52480 Fragaria vesca HOM05D004846 ORTHO05D005630 3.3e-21 104.8 81 61.7
FAN14G2722 Fragaria x ananassa HOM05D004846 ORTHO05D005630 3.3e-21 104.8 81 61.7
Lsat_1_v5_gn_5_21981 Lactuca sativa HOM05D004846 ORTHO05D005630 4.3e-21 104.4 80 58.8
Sed0008655 Sechium edule HOM05D004846 ORTHO05D005630 4.3e-21 104.4 80 60.0
Hund19592 Selenicereus undatus HOM05D004846 ORTHO05D005630 9.5e-21 103.2 80 62.5
FAN09G4064 Fragaria x ananassa HOM05D004846 ORTHO05D005630 1.2e-20 102.8 81 60.5
Hma1.2p1_0279F.1_g112220 Hydrangea macrophylla HOM05D004846 ORTHO05D005630 1.6e-20 102.4 81 61.7
Lj3C906G17 Lonicera japonica HOM05D004846 ORTHO05D005630 1.6e-20 102.4 81 59.3
PGR083G2372 Punica granatum HOM05D004846 ORTHO05D005630 1.6e-20 102.4 79 63.3
HanXRQChr07g0193151 Helianthus annuus HOM05D004846 ORTHO05D005630 2.1e-20 102.1 80 57.5
TWI15G0720 Tripterygium wilfordii HOM05D004846 ORTHO05D005630 2.1e-20 102.1 78 66.7
A02p35330 Brassica napus HOM05D004846 ORTHO05D005630 2.8e-20 101.7 79 63.3
BraA02t08536Z Brassica rapa HOM05D004846 ORTHO05D005630 2.8e-20 101.7 80 62.5
ECA233G5463 Erigeron canadensis HOM05D004846 ORTHO05D005630 2.8e-20 101.7 80 58.8
A06p41290 Brassica napus HOM05D004846 ORTHO05D005630 3.6e-20 101.3 79 62.0
C02p54070 Brassica napus HOM05D004846 ORTHO05D005630 3.6e-20 101.3 79 63.3
BolC2t11469H Brassica oleracea HOM05D004846 ORTHO05D005630 3.6e-20 101.3 79 63.3
BraA06t27054Z Brassica rapa HOM05D004846 ORTHO05D005630 3.6e-20 101.3 79 62.0
CSS0030635 Camellia sinensis var. sinensis HOM05D004846 ORTHO05D005630 4.7e-20 100.9 80 60.0
THA.LOC104805347 Tarenaya hassleriana HOM05D004846 ORTHO05D005630 8.0e-20 100.1 79 60.8
Aa31LG2G5360 Aethionema arabicum HOM05D004846 ORTHO05D005630 1.1e-19 99.8 79 60.8
BcaC06g31008 Brassica carinata HOM05D004846 ORTHO05D005630 1.4e-19 99.4 79 60.8
SEGI_08787 Sequoiadendron giganteum HOM05D004846 ORTHO05D005630 1.4e-19 99.4 81 56.8
RcHm_v2.0_Chr2g0174121 Rosa chinensis HOM05D004846 ORTHO05D005630 1.8e-19 99.0 81 59.3
Thecc.04G024900 Theobroma cacao HOM05D004846 ORTHO05D005630 3.1e-19 98.2 81 61.7
CARHR040910 Cardamine hirsuta HOM05D004846 ORTHO05D005630 4.0e-19 97.8 79 60.8
Cc07_g00370 Coffea canephora HOM05D004846 ORTHO05D005630 5.2e-19 97.4 81 58.0
Sp2g16490 Schrenkiella parvula HOM05D004846 ORTHO05D005630 5.2e-19 97.4 79 59.5
BcaC06g33832 Brassica carinata HOM05D004846 ORTHO05D005630 8.9e-19 96.7 79 58.2
C07p36370 Brassica napus HOM05D004846 ORTHO05D005630 8.9e-19 96.7 79 58.2
BolC7t44153H Brassica oleracea HOM05D004846 ORTHO05D005630 8.9e-19 96.7 79 58.2
Duzib187G0011 Durio zibethinus HOM05D004846 ORTHO05D005630 8.9e-19 96.7 81 61.7
Carub.0005s0560 Capsella rubella HOM05D004846 ORTHO05D005630 1.2e-18 96.3 79 60.8
Actinidia05946 Actinidia chinensis HOM05D004846 ORTHO05D005630 2.6e-18 95.1 81 56.8
CDE02G2253 Ceratophyllum demersum HOM05D004846 ORTHO05D005630 2.6e-18 95.1 81 58.0
Gohir.D10G085400 Gossypium hirsutum HOM05D004846 ORTHO05D005630 3.4e-18 94.7 81 60.5
AT3G27325 Arabidopsis thaliana HOM05D004846 ORTHO05D005630 4.4e-18 94.4 79 59.5
Nitab4.5_0001863g0210 Nicotiana tabacum HOM05D004846 ORTHO05D005630 5.8e-18 94.0 79 55.7
Rhsim10G0011500 Rhododendron simsii HOM05D004846 ORTHO05D005630 5.8e-18 94.0 81 60.5
Sed0014062 Sechium edule HOM05D004846 ORTHO05D005630 5.8e-18 94.0 81 53.1
Ah.10g035510 Amaranthus hybridus HOM05D004846 ORTHO05D005630 7.5e-18 93.6 81 58.0
CSS0012369 Camellia sinensis var. sinensis HOM05D003267 ORTHO05D005630 7.5e-18 93.6 80 57.5
CSS0025976 Camellia sinensis var. sinensis HOM05D003267 ORTHO05D005630 7.5e-18 93.6 80 57.5
CSS0029627 Camellia sinensis var. sinensis HOM05D003267 ORTHO05D005630 7.5e-18 93.6 80 57.5
CSS0035603 Camellia sinensis var. sinensis HOM05D003267 ORTHO05D005630 7.5e-18 93.6 80 57.5
EL10Ac2g04126 Beta vulgaris HOM05D004846 ORTHO05D005630 9.8e-18 93.2 81 54.3
Gorai.011G093300 Gossypium raimondii HOM05D004846 ORTHO05D005630 9.8e-18 93.2 77 62.3
AL5G16590 Arabidopsis lyrata HOM05D004846 ORTHO05D005630 1.7e-17 92.4 79 58.2
CSS0003755 Camellia sinensis var. sinensis HOM05D003267 ORTHO05D005630 2.2e-17 92.0 80 56.2
ClCG05G017040 Citrullus lanatus HOM05D004846 ORTHO05D005630 2.2e-17 92.0 81 53.1
Oeu062399.1 Olea europaea HOM05D004846 ORTHO05D005630 2.9e-17 91.7 81 56.8
AUR62012470 Chenopodium quinoa HOM05D004846 ORTHO05D005630 3.7e-17 91.3 81 54.3
COL.COLO4_29272 Corchorus olitorius HOM05D004846 ORTHO05D005630 3.7e-17 91.3 81 59.3
CSS0050182 Camellia sinensis var. sinensis HOM05D003267 ORTHO05D005630 4.9e-17 90.9 80 56.2
Peaxi162Scf00420g00255 Petunia axillaris HOM05D004846 ORTHO05D005630 4.9e-17 90.9 79 55.7
AUR62031596 Chenopodium quinoa HOM05D004846 ORTHO05D005630 6.4e-17 90.5 81 54.3
Thhalv10003555m.g Eutrema salsugineum HOM05D004846 ORTHO05D005630 6.4e-17 90.5 79 55.7
MELO3C003688.2 Cucumis melo HOM05D004846 ORTHO05D005630 8.3e-17 90.1 81 51.9
vmacro05920 Vaccinium macrocarpon HOM05D004846 ORTHO05D005630 8.3e-17 90.1 77 59.7
CsaV3_3G046520 Cucumis sativus L. HOM05D004846 ORTHO05D005630 1.1e-16 89.7 81 51.9
SalBow2G2965 Salvia bowleyana HOM05D004846 ORTHO05D005630 1.1e-16 89.7 81 51.9
Gohir.A10G160700 Gossypium hirsutum HOM05D004846 ORTHO05D005630 1.9e-16 89.0 77 59.7
PGSC0003DMG402020229 Solanum tuberosum HOM05D004846 ORTHO05D005630 2.4e-16 88.6 79 53.2
PGSC0003DMG403020229 Solanum tuberosum HOM05D004846 ORTHO05D005630 2.4e-16 88.6 79 53.2
HPP92_021915 Vanilla planifolia HOM05D004846 ORTHO05D005630 2.4e-16 88.6 68 57.4
Gohir.A09G032800 Gossypium hirsutum HOM05D004846 ORTHO05D005630 3.2e-16 88.2 81 51.9
Gohir.D09G032800 Gossypium hirsutum HOM05D004846 ORTHO05D005630 3.2e-16 88.2 81 53.1
Gorai.006G037800 Gossypium raimondii HOM05D004846 ORTHO05D005630 3.2e-16 88.2 81 53.1
SGA_v2.0_scaffold135G34938 Striga asiatica HOM05D004846 ORTHO05D005630 3.2e-16 88.2 81 49.4
SGA_v2.0_scaffold66G22277 Striga asiatica HOM05D004846 ORTHO05D005630 3.2e-16 88.2 81 49.4
CDE01G0149 Ceratophyllum demersum HOM05D004846 ORTHO05D005630 5.4e-16 87.4 81 53.1
DCAR_013672 Daucus carota HOM05D004846 ORTHO05D005630 5.4e-16 87.4 73 58.9
Migut.H00055 Erythranthe guttata HOM05D004846 ORTHO05D005630 5.4e-16 87.4 81 50.6
Sopen02g038410 Solanum pennellii HOM05D004846 ORTHO05D005630 1.2e-15 86.3 79 51.9
Solyc02g093770.3 Solanum lycopersicum HOM05D004846 ORTHO05D005630 2.7e-15 85.1 79 51.9
CAN.G473.55 Capsicum annuum HOM05D004846 ORTHO05D005630 3.5e-15 84.7 79 51.9
Zm00001eb308720 Zea mays HOM05D004846 ORTHO05D005630 7.8e-15 83.6 69 59.4
Os09g0266400 Oryza sativa ssp. japonica HOM05D004846 ORTHO05D005630 1.3e-14 82.8 69 58.0
Mapoly0133s0025 Marchantia polymorpha HOM05D004846 ORTHO05D005630 3.9e-14 81.3 79 45.6
unitig_1.g29345 Utricularia gibba HOM05D004846 ORTHO05D005630 1.2e-12 76.3 75 48.0
unitig_747.g22069 Utricularia gibba HOM05D004846 ORTHO05D005630 1.2e-12 76.3 75 48.0
Pp3c12_23520 Physcomitrium patens HOM05D004846 ORTHO05D005630 8.1e-12 73.6 79 44.3
MSTRG.24063 Avicennia marina HOM05D004846 ORTHO05D005630 4.0e-11 71.2 65 52.3
SMO119G0307 Selaginella moellendorffii HOM05D004846 ORTHO05D005630 5.2e-11 70.9 79 44.3
Pp3c3_36830 Physcomitrium patens HOM05D004846 ORTHO05D005630 1.5e-10 69.3 74 44.6
Pp3c14_5780 Physcomitrium patens HOM05D004846 ORTHO05D005630 1.3e-09 66.2 73 42.5
AagrBONN_evm.TU.Sc2ySwM_228.569 Anthoceros agrestis HOM05D004846 ORTHO05D005630 6.4e-09 63.9 77 41.6


User provided reference genes

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