Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_30430_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 2.8e-260 901.4 431 100.0
Ca_13672_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 5.8e-258 893.6 426 100.0
Ca_22528_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.4e-126 457.2 554 47.8
Ca_11659_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.9e-123 446.8 579 46.3
Ca_05875_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 2.7e-122 443.0 331 67.7
Ca_22549_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 4.9e-116 422.2 447 52.6
Ca_22741_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.9e-112 410.2 728 37.2
Ca_24116_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 4.0e-110 402.5 370 57.0
Ca_14156_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 5.4e-107 392.1 530 45.5
Ca_30934_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 2.7e-106 389.8 290 67.9
Ca_03092_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 3.0e-105 386.3 290 64.8
Ca_14742_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.5e-101 374.0 330 59.7
Ca_23895_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.0e-100 371.3 371 54.7
Ca_25846_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 3.3e-96 356.3 248 68.5
Ca_19341_v3 Cicer arietinum L. HOM05D005324 ORTHO05D000048 1.6e-95 354.0 411 49.9
Ca_30800_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.6e-95 354.0 411 49.9
Ca_02976_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 4.5e-93 345.9 206 76.2
Ca_14762_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 8.4e-92 341.7 258 66.3
Ca_25326_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 9.3e-91 338.2 233 70.0
Ca_23845_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 6.3e-87 325.5 325 54.2
Ca_23844_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 5.0e-84 315.8 257 62.3
Ca_30746_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 5.0e-84 315.8 257 62.3
Ca_14697_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 4.6e-82 309.3 221 67.4
Ca_14332_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 8.8e-81 305.1 309 54.0
Lj6g0006708 Lotus japonicus HOM05D005324 ORTHO05D001185 1.5e-69 267.7 212 57.5
Lj4g0014350 Lotus japonicus HOM05D005324 ORTHO05D001185 4.5e-69 266.2 211 57.3
Lj3g0022640 Lotus japonicus HOM05D005324 ORTHO05D001185 7.7e-69 265.4 278 48.6
Lj6g0011364 Lotus japonicus HOM05D005324 ORTHO05D001185 2.1e-66 257.3 207 56.5
Atru.chr5.1824 Acer truncatum HOM05D005324 ORTHO05D001185 1.7e-63 247.7 210 51.4
Atru.chr13.2110 Acer truncatum HOM05D005324 ORTHO05D001185 6.3e-63 245.7 250 47.2
Atru.chr7.181 Acer truncatum HOM05D005324 ORTHO05D001185 7.0e-62 242.3 210 52.9
Atru.chr9.330 Acer truncatum HOM05D005324 ORTHO05D001185 2.0e-61 240.7 253 45.1
Atru.chr5.1763 Acer truncatum HOM05D005324 ORTHO05D001185 3.5e-61 240.0 326 39.3
Lj4g0024804 Lotus japonicus HOM05D005324 ORTHO05D001185 2.9e-60 236.9 253 48.6
Lj2g0007658 Lotus japonicus HOM05D005324 ORTHO05D001185 3.2e-59 233.4 266 46.6
Atru.chr4.1769 Acer truncatum HOM05D005324 ORTHO05D001185 2.7e-58 230.3 191 54.5
Ca_19239_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 4.7e-58 229.6 409 38.9
Ca_14763_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 4.4e-56 223.0 141 74.5
Atru.chr4.310 Acer truncatum HOM05D005324 ORTHO05D001185 4.4e-48 196.4 259 39.8
CANSAT80G1954 Cannabis sativa HOM05D005324 ORTHO05D001185 1.6e-45 188.0 206 45.6
Atru.chr1.2372 Acer truncatum HOM05D005324 ORTHO05D001185 2.9e-44 183.7 161 50.9
Thecc.01G138000 Theobroma cacao HOM05D005324 ORTHO05D001185 6.1e-42 176.0 209 42.1
Cc00_g34090 Coffea canephora HOM05D005324 ORTHO05D001185 1.2e-40 171.8 262 37.0
Atru.chr10.1416 Acer truncatum HOM05D005324 ORTHO05D001185 2.0e-37 161.0 210 40.0
Thhalv10012231m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 2.7e-37 160.6 235 39.6
ECA248G1715 Erigeron canadensis HOM05D005324 ORTHO05D001185 5.9e-37 159.5 215 37.7
Thhalv10028029m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 5.9e-37 159.5 226 39.4
Ca_24087_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.0e-36 158.7 152 55.3
PGSC0003DMG400042319 Solanum tuberosum HOM05D019581 ORTHO05D018017 1.7e-36 157.9 213 39.0
HanXRQChr09g0262551 Helianthus annuus HOM05D003376 ORTHO05D001185 2.9e-36 157.1 216 35.2
Cc00_g17730 Coffea canephora HOM05D003326 ORTHO05D001185 5.0e-36 156.4 212 38.7
COL.COLO4_29280 Corchorus olitorius HOM05D003376 ORTHO05D001185 8.6e-36 155.6 212 39.2
Atru.chr1.2264 Acer truncatum HOM05D005324 ORTHO05D001185 1.2e-34 151.8 133 51.1
Lj2g0023412 Lotus japonicus HOM05D005324 ORTHO05D018017 1.2e-34 151.8 131 54.2
Thhalv10028344m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 4.7e-34 149.8 273 34.8
Thhalv10023188m.g Eutrema salsugineum HOM05D003376 ORTHO05D000002 6.8e-33 146.0 259 35.1
Ca_18104_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 2.0e-32 144.4 96 71.9
Glyma.11G180400 Glycine max HOM05D005324 ORTHO05D001185 2.6e-32 144.1 240 36.7
AL1G57140 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 5.8e-32 142.9 259 33.2
Thhalv10028343m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 2.9e-31 140.6 246 32.9
Thhalv10001272m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 3.7e-31 140.2 233 34.3
Ca_29877_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 4.9e-31 139.8 88 81.8
AL6G41750 Arabidopsis lyrata HOM05D003376 ORTHO05D000002 6.4e-31 139.4 264 33.0
AL6G42760 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 6.4e-31 139.4 264 33.0
AL8G17310 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 6.4e-31 139.4 259 32.8
AL8G17360 Arabidopsis lyrata HOM05D003376 ORTHO05D011035 6.4e-31 139.4 259 33.6
AL88U10020 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 1.1e-30 138.7 203 36.5
Ca_20262_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 2.4e-30 137.5 117 62.4
Thhalv10002934m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 3.2e-30 137.1 259 30.1
arahy.Tifrunner.gnm1.ann1.BZ6XIA Arachis hypogaea HOM05D003326 ORTHO05D000002 4.1e-30 136.7 108 54.6
AL8G17320 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 5.4e-30 136.3 234 34.2
Thhalv10003417m.g Eutrema salsugineum HOM05D003376 ORTHO05D000048 1.2e-29 135.2 259 30.1
Ca_28515_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.6e-29 134.8 86 69.8
Ca_13202_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.7e-28 131.3 424 32.1
Atru.chr4.959 Acer truncatum HOM05D005324 ORTHO05D001185 2.3e-28 131.0 112 54.5
Atru.chr1.2076 Acer truncatum HOM05D005324 ORTHO05D001185 3.0e-28 130.6 100 55.0
Atru.chr3.2328 Acer truncatum HOM05D005324 ORTHO05D001185 4.0e-25 120.2 107 49.5
Ca_00995_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.5e-24 118.2 88 67.0
Atru.chr4.605 Acer truncatum HOM05D005324 ORTHO05D001185 2.6e-24 117.5 368 28.8
Ca_23425_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 2.2e-23 114.4 92 64.1
Thecc.07G158200 Theobroma cacao HOM05D005324 ORTHO05D001185 3.2e-22 110.5 175 33.7
BcaB05g22490 Brassica carinata HOM05D003376 ORTHO05D001185 5.4e-22 109.8 172 33.7
Ca_19340_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 6.0e-21 106.3 89 64.0
Atru.chr11.226 Acer truncatum HOM05D005324 ORTHO05D001185 7.8e-21 105.9 143 39.9
C07p27990 Brassica napus HOM05D003376 ORTHO05D001185 1.0e-20 105.5 211 32.2
Atru.chr1.2263 Acer truncatum HOM05D005324 ORTHO05D001185 3.0e-20 104.0 169 39.6
Glyma.19G076000 Glycine max HOM05D005324 ORTHO05D001185 3.0e-20 104.0 120 48.3
Thhalv10027218m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 5.1e-20 103.2 237 30.4
Thhalv10000705m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 6.6e-20 102.8 243 28.8
Atru.chr3.3306 Acer truncatum HOM05D000477 ORTHO05D001185 7.3e-19 99.4 67 64.2
Ca_05166_v3 Cicer arietinum L. HOM05D005324 ORTHO05D000002 2.8e-18 97.4 278 29.9
BolC1t03802H Brassica oleracea HOM05D003376 ORTHO05D001185 6.2e-18 96.3 226 31.0
Medtr3g436740 Medicago truncatula HOM05D005324 ORTHO05D001185 6.2e-18 96.3 198 36.4
AL88U10010 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 2.3e-17 94.4 307 27.7
Ca_14696_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 3.1e-17 94.0 235 32.8
AL6G37690 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 4.0e-17 93.6 205 30.2
Lj1g0026229 Lotus japonicus HOM05D005324 ORTHO05D001185 8.9e-17 92.4 335 29.0
Atru.chr13.2462 Acer truncatum HOM05D005324 ORTHO05D001185 2.9e-15 87.4 173 32.4
Ca_23893_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 2.9e-15 87.4 161 37.3
MBI14_g23481_MAGBIO Magnolia biondii HOM05D005324 ORTHO05D001185 2.4e-14 84.3 146 30.8
COL.COLO4_27206 Corchorus olitorius HOM05D003326 ORTHO05D001185 4.6e-13 80.1 179 30.7
TAR633G1644 Trochodendron aralioides HOM05D005152 ORTHO05D006162 7.8e-13 79.3 144 31.2
Thhalv10002230m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 4.3e-11 73.6 157 28.0
Ca_15185_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.6e-10 71.6 59 54.2
Ca_04091_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 2.1e-10 71.2 59 57.6
Ca_30525_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 2.1e-10 71.2 59 57.6
BraA09t38519Z Brassica rapa HOM05D003376 ORTHO05D001185 1.1e-09 68.9 60 53.3
Ca_11652_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 6.8e-09 66.2 53 56.6
BraA05t20180Z Brassica rapa HOM05D003376 ORTHO05D001185 8.9e-09 65.9 60 51.7
CAN.G505.24 Capsicum annuum HOM05D005324 ORTHO05D001185 8.9e-09 65.9 78 42.3
Ca_05672_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 8.9e-09 65.9 68 54.4
A05p12450 Brassica napus HOM05D003376 ORTHO05D001185 1.2e-08 65.5 128 31.2
A09p27420 Brassica napus HOM05D003376 ORTHO05D001185 1.2e-08 65.5 128 31.2
Medtr2g048620 Medicago truncatula HOM05D001200 ORTHO05D002731 2.0e-08 64.7 57 54.4
A01p13220 Brassica napus HOM05D003376 ORTHO05D001185 3.4e-08 63.9 62 46.8
A01p13240 Brassica napus HOM05D003376 ORTHO05D001185 3.4e-08 63.9 62 46.8
Duzib187G1529 Durio zibethinus HOM05D005324 ORTHO05D001185 1.3e-07 62.0 138 29.0
C01p15920 Brassica napus HOM05D003376 ORTHO05D001185 1.7e-07 61.6 61 45.9
C07p11800 Brassica napus HOM05D003376 ORTHO05D001185 6.4e-07 59.7 79 35.4
MBI03_g38333_MAGBIO Magnolia biondii HOM05D005324 ORTHO05D001185 6.4e-07 59.7 59 50.8
Lj6g0018849 Lotus japonicus HOM05D005324 ORTHO05D001185 8.4e-07 59.3 293 25.6
BraA01t01266Z Brassica rapa HOM05D003376 ORTHO05D001185 1.1e-06 58.9 60 46.7
BolC1t01546H Brassica oleracea HOM05D003376 ORTHO05D001185 1.4e-06 58.5 60 45.0
PGSC0003DMG400046969 Solanum tuberosum HOM05D016590 ORTHO05D018017 9.3e-06 55.8 71 36.6


User provided reference genes

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