Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_30365_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 2.1e-123 445.7 220 100.0
Ca_08423_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 5.9e-73 278.1 219 71.7
Medtr7g090680 Medicago truncatula HOM05D005255 ORTHO05D006276 2.5e-55 219.5 200 60.5
TPR.G32740 Trifolium pratense HOM05D005255 ORTHO05D006276 2.6e-52 209.5 207 59.4
Psat3g075800 Pisum sativum HOM05D005255 ORTHO05D006276 8.0e-46 188.0 180 57.2
Lj1g0022872 Lotus japonicus HOM05D005255 ORTHO05D006276 4.0e-45 185.7 185 55.7
Glyma.03G132200 Glycine max HOM05D005255 ORTHO05D006276 8.2e-43 177.9 217 49.8
Lalb_Chr25g0287041 Lupinus albus HOM05D005255 ORTHO05D006276 5.9e-41 171.8 225 47.1
arahy.Tifrunner.gnm1.ann1.5V2BX3 Arachis hypogaea HOM05D005255 ORTHO05D006276 7.2e-39 164.9 198 49.0
Glyma.19G134000 Glycine max HOM05D005255 ORTHO05D006276 2.7e-38 162.9 215 46.5
Ca_13718_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 6.1e-38 161.8 182 57.1
Ca_08424_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 2.3e-37 159.8 147 66.7
arahy.Tifrunner.gnm1.ann1.FQMP84 Arachis hypogaea HOM05D005255 ORTHO05D006276 4.0e-37 159.1 198 47.0
Phvul.001G128100 Phaseolus vulgaris HOM05D005255 ORTHO05D006276 8.8e-37 157.9 182 52.2
VMungo1383G1524 Vigna mungo HOM05D005255 ORTHO05D006276 4.4e-36 155.6 178 52.2
VMungo1383G2357 Vigna mungo HOM05D005255 ORTHO05D006276 7.5e-36 154.8 178 51.7
TWI74G1492 Tripterygium wilfordii HOM05D005255 ORTHO05D006276 7.0e-34 148.3 136 56.6
CiPaw.09G042700 Carya illinoinensis HOM05D005255 ORTHO05D006276 1.2e-33 147.5 90 74.4
Duzib093G1389 Durio zibethinus HOM05D005255 ORTHO05D006276 3.5e-33 146.0 81 77.8
Ciclev10006800m.g Citrus clementina HOM05D005255 ORTHO05D006276 5.9e-33 145.2 90 74.4
QL07p004453 Quercus lobata HOM05D005255 ORTHO05D006276 5.9e-33 145.2 88 73.9
Haze_19754 Corylus avellana HOM05D005255 ORTHO05D006276 1.7e-32 143.7 87 73.6
Nitab4.5_0005195g0020 Nicotiana tabacum HOM05D005255 ORTHO05D006276 3.8e-32 142.5 86 72.1
Atru.chr1.1248 Acer truncatum HOM05D005255 ORTHO05D006276 6.5e-32 141.7 90 70.0
Ca_20730_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 1.1e-31 141.0 120 64.2
GSVIVG01033557001 Vitis vinifera HOM05D005255 ORTHO05D006276 1.1e-31 141.0 197 45.2
MBI19_g17528_MAGBIO Magnolia biondii HOM05D005255 ORTHO05D006276 1.5e-31 140.6 80 76.2
Peaxi162Scf00130g01019 Petunia axillaris HOM05D005255 ORTHO05D006276 1.5e-31 140.6 86 70.9
CsaV3_4G021950 Cucumis sativus L. HOM05D005255 ORTHO05D006276 1.9e-31 140.2 78 75.6
Dinv30292 Davidia involucrata HOM05D005255 ORTHO05D006276 1.9e-31 140.2 131 55.0
TAR623G1148 Trochodendron aralioides HOM05D005255 ORTHO05D006276 1.9e-31 140.2 81 75.3
TAR623G1440 Trochodendron aralioides HOM05D005255 ORTHO05D006276 1.9e-31 140.2 81 75.3
MELO3C014208.2 Cucumis melo HOM05D005255 ORTHO05D006276 2.5e-31 139.8 78 75.6
RcHm_v2.0_Chr3g0484111 Rosa chinensis HOM05D005255 ORTHO05D006276 5.5e-31 138.7 133 56.4
PGSC0003DMG400012726 Solanum tuberosum HOM05D005255 ORTHO05D006276 5.5e-31 138.7 86 69.8
SGA_v2.0_scaffold105G30345 Striga asiatica HOM05D005255 ORTHO05D006276 5.5e-31 138.7 84 71.4
Lj1A1118T28 Lonicera japonica HOM05D005255 ORTHO05D006276 7.2e-31 138.3 86 72.1
Lj1C1121T6 Lonicera japonica HOM05D005255 ORTHO05D006276 7.2e-31 138.3 86 72.1
FvH4_6g24820 Fragaria vesca HOM05D005255 ORTHO05D006276 9.5e-31 137.9 120 60.0
Sopen04g008740 Solanum pennellii HOM05D005255 ORTHO05D006276 9.5e-31 137.9 86 69.8
CAN.G1237.18 Capsicum annuum HOM05D005255 ORTHO05D006276 1.2e-30 137.5 86 68.6
Cfa016749 Carpinus fangiana HOM05D005255 ORTHO05D006276 1.2e-30 137.5 87 71.3
COL.COLO4_21290 Corchorus olitorius HOM05D005255 ORTHO05D006276 1.2e-30 137.5 80 73.8
Sed0023795 Sechium edule HOM05D005255 ORTHO05D006276 1.2e-30 137.5 77 77.9
AUR62026140 Chenopodium quinoa HOM05D005255 ORTHO05D006276 1.6e-30 137.1 90 71.1
ClCG04G003970 Citrullus lanatus HOM05D005255 ORTHO05D006276 1.6e-30 137.1 74 79.7
Rhsim04G0108300 Rhododendron simsii HOM05D005255 ORTHO05D006276 1.6e-30 137.1 77 77.9
CDE08G0636 Ceratophyllum demersum HOM05D005255 ORTHO05D006276 2.1e-30 136.7 81 75.3
FAN14G1086 Fragaria x ananassa HOM05D005255 ORTHO05D006276 2.8e-30 136.3 120 59.2
Actinidia38145 Actinidia chinensis HOM05D005255 ORTHO05D006276 3.6e-30 136.0 90 71.1
ATR0721G141 Amborella trichopoda HOM05D005255 ORTHO05D006276 3.6e-30 136.0 90 66.7
AUR62030394 Chenopodium quinoa HOM05D005255 ORTHO05D006276 3.6e-30 136.0 83 74.7
Sabra06G0031000 Salix brachista HOM05D005255 ORTHO05D006276 3.6e-30 136.0 77 75.3
Nitab4.5_0011420g0030 Nicotiana tabacum HOM05D005255 ORTHO05D006276 4.7e-30 135.6 86 68.6
RcHm_v2.0_Chr3g0484561 Rosa chinensis HOM05D005255 ORTHO05D006276 4.7e-30 135.6 133 55.6
Solyc04g017650.4 Solanum lycopersicum HOM05D005255 ORTHO05D006276 4.7e-30 135.6 86 68.6
Thecc.05G144600 Theobroma cacao HOM05D005255 ORTHO05D006276 4.7e-30 135.6 129 55.0
CANSAT80G0695 Cannabis sativa HOM05D005255 ORTHO05D006276 6.1e-30 135.2 88 69.3
Manes.09G016500 Manihot esculenta HOM05D005255 ORTHO05D006276 6.1e-30 135.2 91 68.1
Sc13g0001470 Simmondsia chinensis HOM05D005255 ORTHO05D006276 6.1e-30 135.2 87 66.7
ECA236G0023 Erigeron canadensis HOM05D005255 ORTHO05D006276 8.0e-30 134.8 88 65.9
Lsat_1_v5_gn_8_83080 Lactuca sativa HOM05D005255 ORTHO05D006276 8.0e-30 134.8 80 70.0
CSS0035930 Camellia sinensis var. sinensis HOM05D005255 ORTHO05D006276 1.4e-29 134.0 113 60.2
CAN.G1237.20 Capsicum annuum HOM05D005255 ORTHO05D006276 1.8e-29 133.7 86 67.4
MSTRG.6397 Avicennia marina HOM05D005255 ORTHO05D006276 2.3e-29 133.3 77 75.3
Manes.09G016721 Manihot esculenta HOM05D005255 ORTHO05D006276 2.3e-29 133.3 91 67.0
Cc06_g18410 Coffea canephora HOM05D005255 ORTHO05D006276 3.0e-29 132.9 83 69.9
TAR624G0617 Trochodendron aralioides HOM05D005255 ORTHO05D006276 3.0e-29 132.9 81 72.8
Oeu008184.2 Olea europaea HOM05D005255 ORTHO05D006276 4.0e-29 132.5 80 71.2
Prupe.7G049600 Prunus persica HOM05D005255 ORTHO05D006276 4.0e-29 132.5 191 46.6
EL10Ac3g07169 Beta vulgaris HOM05D005255 ORTHO05D006276 5.2e-29 132.1 81 72.8
Eucgr.A02293 Eucalyptus grandis HOM05D005255 ORTHO05D006276 5.2e-29 132.1 172 43.6
CANSAT80G1558 Cannabis sativa HOM05D005255 ORTHO05D006276 6.8e-29 131.7 88 68.2
DCAR_020535 Daucus carota HOM05D005255 ORTHO05D006276 6.8e-29 131.7 101 59.4
Hund24659 Selenicereus undatus HOM05D005255 ORTHO05D006276 8.8e-29 131.3 90 65.6
TAR628G1157 Trochodendron aralioides HOM05D005255 ORTHO05D006276 8.8e-29 131.3 81 70.4
Migut.J01697 Erythranthe guttata HOM05D005255 ORTHO05D006276 1.2e-28 131.0 77 75.3
HanXRQChr06g0176811 Helianthus annuus HOM05D005255 ORTHO05D006276 1.2e-28 131.0 144 45.8
Potri.006G045100 Populus trichocarpa HOM05D005255 ORTHO05D006276 1.2e-28 131.0 77 72.7
Nn7g36447 Nelumbo nucifera HOM05D005255 ORTHO05D006276 2.0e-28 130.2 81 65.4
Zm00001eb286800 Zea mays HOM05D005255 ORTHO05D006276 2.0e-28 130.2 81 69.1
Cpa.g.sc120.15 Carica papaya HOM05D005255 ORTHO05D006276 3.4e-28 129.4 185 43.8
SalBow6G4730 Salvia bowleyana HOM05D005255 ORTHO05D006276 7.5e-28 128.3 87 63.2
C04p02730 Brassica napus HOM05D005255 ORTHO05D006276 1.3e-27 127.5 81 65.4
BolC4t21913H Brassica oleracea HOM05D005255 ORTHO05D006276 1.3e-27 127.5 81 65.4
Ah.13g076740 Amaranthus hybridus HOM05D005255 ORTHO05D006276 2.2e-27 126.7 74 75.7
PGR031G1801 Punica granatum HOM05D005255 ORTHO05D006276 2.2e-27 126.7 178 42.7
Sp4g23710 Schrenkiella parvula HOM05D005255 ORTHO05D006276 2.2e-27 126.7 87 63.2
Aa31LG1G23460 Aethionema arabicum HOM05D005255 ORTHO05D006276 3.7e-27 125.9 157 47.1
A05p02290 Brassica napus HOM05D005255 ORTHO05D006276 3.7e-27 125.9 80 65.0
Aqoxy2G00272 Aquilegia oxysepala HOM05D005255 ORTHO05D006276 1.1e-26 124.4 127 51.2
THA.LOC104817056 Tarenaya hassleriana HOM05D005255 ORTHO05D006276 1.8e-26 123.6 213 36.2
BraA05t19224Z Brassica rapa HOM05D005255 ORTHO05D006276 3.1e-26 122.9 80 63.8
AT2G41450 Arabidopsis thaliana HOM05D005255 ORTHO05D006276 4.1e-26 122.5 84 61.9
Thhalv10016390m.g Eutrema salsugineum HOM05D005255 ORTHO05D006276 4.1e-26 122.5 120 50.8
BcaC02g12783 Brassica carinata HOM05D005255 ORTHO05D006276 9.2e-26 121.3 81 64.2
Carub.0004s2374 Capsella rubella HOM05D005255 ORTHO05D006276 2.0e-25 120.2 87 57.5
Os05g0376600 Oryza sativa ssp. japonica HOM05D005255 ORTHO05D006276 2.0e-25 120.2 79 63.3
CARHR136560 Cardamine hirsuta HOM05D005255 ORTHO05D006276 2.7e-25 119.8 103 54.4
SEGI_13590 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 2.7e-25 119.8 109 50.5
AL4G39520 Arabidopsis lyrata HOM05D005255 ORTHO05D006276 3.5e-25 119.4 87 60.9
PSO339G5261 Papaver somniferum HOM05D005255 ORTHO05D006276 1.0e-24 117.9 137 46.0
HPP92_003249 Vanilla planifolia HOM05D005255 ORTHO05D006276 3.8e-24 115.9 80 62.5
SEGI_39771 Sequoiadendron giganteum HOM05D005255 ORTHO05D006276 6.1e-22 108.6 102 49.0
AagrBONN_evm.TU.Sc2ySwM_228.5074 Anthoceros agrestis HOM05D005255 ORTHO05D006276 8.0e-22 108.2 101 47.5
Pp3c8_2040 Physcomitrium patens HOM05D005255 ORTHO05D006276 2.0e-20 103.6 77 58.4
Nitab4.5_0000826g0030 Nicotiana tabacum HOM05D005255 ORTHO05D006276 2.6e-20 103.2 60 73.3
Mapoly0085s0026 Marchantia polymorpha HOM05D005255 ORTHO05D006276 3.4e-20 102.8 77 51.9
Pp3c4_1630 Physcomitrium patens HOM05D005255 ORTHO05D006276 9.2e-18 94.7 77 53.2
Pp3c4_1631 Physcomitrium patens HOM05D005255 ORTHO05D006276 9.2e-18 94.7 77 53.2
HPP92_003251 Vanilla planifolia HOM05D005255 ORTHO05D006276 6.2e-14 82.0 56 62.5
unitig_8.g3496 Utricularia gibba HOM05D005255 ORTHO05D006276 2.2e-11 73.6 79 49.4
Dinv30288 Davidia involucrata HOM05D007529 ORTHO05D007451 6.4e-11 72.0 37 78.4
vmacro09036 Vaccinium macrocarpon HOM05D005255 ORTHO05D006276 1.1e-10 71.2 49 61.2
RcHm_v2.0_Chr1g0374991 Rosa chinensis HOM05D005255 ORTHO05D006276 4.1e-10 69.3 37 81.1
BcaB04g19772 Brassica carinata HOM05D005255 ORTHO05D021741 2.7e-09 66.6 61 50.8
vmacro09037 Vaccinium macrocarpon HOM05D005255 ORTHO05D006276 2.7e-09 66.6 34 85.3
FAN02G3622 Fragaria x ananassa HOM05D005255 ORTHO05D006276 1.7e-08 63.9 82 48.8
C03p67440 Brassica napus HOM05D005255 ORTHO05D021741 2.3e-08 63.5 49 57.1
C03p67420 Brassica napus HOM05D005255 ORTHO05D021741 1.5e-07 60.8 57 49.1
BolSC21t60285H Brassica oleracea HOM05D005255 ORTHO05D021741 1.5e-07 60.8 57 49.1


User provided reference genes

Program Settings