Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_30349_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 1.7e-296 1021.9 516 100.0
Ca_22482_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 1.3e-280 969.1 493 100.0
Psat4g108080 Pisum sativum HOM05D006455 ORTHO05D008098 6.3e-227 790.8 516 77.7
TPR.G31161 Trifolium pratense HOM05D006455 ORTHO05D008098 5.9e-225 784.3 516 78.1
Medtr8g071270 Medicago truncatula HOM05D006455 ORTHO05D008098 3.7e-211 738.4 495 78.0
Lj4g0021895 Lotus japonicus HOM05D006455 ORTHO05D008098 1.1e-202 710.3 517 72.7
Lalb_Chr16g0391751 Lupinus albus HOM05D006455 ORTHO05D008098 1.4e-189 666.8 518 67.4
arahy.Tifrunner.gnm1.ann1.E0JCGG Arachis hypogaea HOM05D006455 ORTHO05D008098 1.8e-181 639.8 496 66.9
arahy.Tifrunner.gnm1.ann1.U8H9H1 Arachis hypogaea HOM05D006455 ORTHO05D008098 2.6e-180 636.0 496 66.9
Glyma.16G105200 Glycine max HOM05D006455 ORTHO05D008098 1.5e-164 583.6 496 61.9
VMungo0251G3325 Vigna mungo HOM05D006455 ORTHO05D008098 2.0e-164 583.2 515 60.8
Phvul.003G279900 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 4.3e-159 565.5 496 62.3
Cfa012584 Carpinus fangiana HOM05D006455 ORTHO05D008098 5.6e-159 565.1 515 58.1
Haze_08072 Corylus avellana HOM05D006455 ORTHO05D008098 2.6e-156 556.2 515 57.5
CiPaw.12G071600 Carya illinoinensis HOM05D006455 ORTHO05D008098 1.2e-148 530.8 517 54.2
Prupe.2G049600 Prunus persica HOM05D006455 ORTHO05D008098 1.3e-147 527.3 516 51.6
TAR362G0985 Trochodendron aralioides HOM05D006455 ORTHO05D008098 1.6e-145 520.4 517 54.9
GSVIVG01001915001 Vitis vinifera HOM05D006455 ORTHO05D008098 2.7e-145 519.6 518 53.3
RcHm_v2.0_Chr7g0228451 Rosa chinensis HOM05D006455 ORTHO05D008098 7.9e-145 518.1 511 53.6
CsaV3_3G001300 Cucumis sativus L. HOM05D006455 ORTHO05D008098 1.0e-144 517.7 520 50.8
FvH4_5g32260 Fragaria vesca HOM05D006455 ORTHO05D008098 9.6e-143 511.1 511 51.9
FAN18G4165 Fragaria x ananassa HOM05D006455 ORTHO05D008098 6.2e-142 508.4 511 51.7
Nn1g09557 Nelumbo nucifera HOM05D006455 ORTHO05D008098 3.4e-140 502.7 517 51.8
MD02G1270700 Malus domestica HOM05D006455 ORTHO05D008098 1.0e-139 501.1 515 48.9
FAN13G0315 Fragaria x ananassa HOM05D006455 ORTHO05D008098 1.9e-138 496.9 511 50.1
QL12p000818 Quercus lobata HOM05D006455 ORTHO05D008098 2.5e-138 496.5 498 54.2
CANSAT21G2240 Cannabis sativa HOM05D006455 ORTHO05D008098 2.1e-137 493.4 518 50.6
Manes.12G057502 Manihot esculenta HOM05D006455 ORTHO05D008098 4.6e-137 492.3 521 52.0
Manes.12G057904 Manihot esculenta HOM05D006455 ORTHO05D008098 6.0e-137 491.9 521 52.0
ClCG10G001240 Citrullus lanatus HOM05D006455 ORTHO05D008098 1.0e-136 491.1 498 53.6
MELO3C013818.2 Cucumis melo HOM05D006455 ORTHO05D008098 3.9e-136 489.2 512 52.1
Gohir.A11G144500 Gossypium hirsutum HOM05D006455 ORTHO05D008098 5.1e-136 488.8 512 50.6
Migut.D00764 Erythranthe guttata HOM05D006455 ORTHO05D008098 1.3e-134 484.2 518 50.2
Manes.12G057700 Manihot esculenta HOM05D006455 ORTHO05D008098 1.3e-134 484.2 521 52.0
Manes.12G057901 Manihot esculenta HOM05D006455 ORTHO05D008098 1.3e-134 484.2 521 52.0
FAN08G0013 Fragaria x ananassa HOM05D006455 ORTHO05D004776 1.6e-134 483.8 493 51.7
Ciclev10014895m.g Citrus clementina HOM05D006455 ORTHO05D008098 2.2e-134 483.4 520 53.3
Potri.014G174300 Populus trichocarpa HOM05D006455 ORTHO05D008098 2.2e-134 483.4 520 52.5
Atru.chr6.3495 Acer truncatum HOM05D006455 ORTHO05D008098 4.8e-134 482.3 519 52.0
Gorai.007G161800 Gossypium raimondii HOM05D006455 ORTHO05D008098 8.2e-134 481.5 513 50.1
Thecc.01G205700 Theobroma cacao HOM05D006455 ORTHO05D008098 2.6e-132 476.5 518 50.4
TWI75G0274 Tripterygium wilfordii HOM05D006455 ORTHO05D008098 2.6e-132 476.5 517 48.5
Sopen09g013040 Solanum pennellii HOM05D006455 ORTHO05D008098 1.0e-131 474.6 519 48.7
Lsat_1_v5_gn_5_176300 Lactuca sativa HOM05D006455 ORTHO05D008098 1.1e-130 471.1 518 47.3
Lj1A106T21 Lonicera japonica HOM05D006455 ORTHO05D008098 9.4e-130 468.0 497 52.7
HanXRQChr01g0014041 Helianthus annuus HOM05D006455 ORTHO05D008098 2.1e-129 466.8 517 48.0
HanXRQChr01g0013871 Helianthus annuus HOM05D006455 ORTHO05D008098 2.7e-129 466.5 517 48.0
ECA248G0009 Erigeron canadensis HOM05D006455 ORTHO05D008098 3.6e-129 466.1 518 48.6
MSTRG.18514 Avicennia marina HOM05D006455 ORTHO05D008098 7.9e-129 464.9 519 49.5
Cc04_g10320 Coffea canephora HOM05D006455 ORTHO05D008098 3.0e-128 463.0 511 46.8
SGA_v2.0_scaffold158G37512 Striga asiatica HOM05D006455 ORTHO05D008098 1.1e-127 461.1 536 47.9
Sed0000077 Sechium edule HOM05D006455 ORTHO05D008098 4.3e-127 459.1 499 50.1
Rhsim13G0055500 Rhododendron simsii HOM05D006455 ORTHO05D008098 2.8e-126 456.4 522 47.5
Aqoxy2G04132 Aquilegia oxysepala HOM05D006455 ORTHO05D008098 4.8e-126 455.7 518 48.8
Nitab4.5_0006514g0010 Nicotiana tabacum HOM05D006455 ORTHO05D008098 8.2e-126 454.9 514 49.4
Sabra14G0133600 Salix brachista HOM05D006455 ORTHO05D008098 8.2e-126 454.9 519 50.9
Hund02815 Selenicereus undatus HOM05D006455 ORTHO05D008098 1.1e-125 454.5 516 46.7
CSS0002127 Camellia sinensis var. sinensis HOM05D006455 ORTHO05D008098 1.8e-125 453.8 438 52.1
Sp2g18700 Schrenkiella parvula HOM05D006455 ORTHO05D008098 3.1e-125 453.0 518 48.6
AUR62028628 Chenopodium quinoa HOM05D006455 ORTHO05D008098 9.1e-125 451.4 516 46.3
Cpa.g.sc8.27 Carica papaya HOM05D006455 ORTHO05D008098 7.7e-124 448.4 498 49.6
COL.COLO4_29922 Corchorus olitorius HOM05D006455 ORTHO05D008098 7.7e-124 448.4 532 48.7
AUR62008053 Chenopodium quinoa HOM05D006455 ORTHO05D008098 2.2e-123 446.8 516 45.2
PGR044G2428 Punica granatum HOM05D006455 ORTHO05D008098 1.1e-122 444.5 515 47.4
Nitab4.5_0000077g0170 Nicotiana tabacum HOM05D006455 ORTHO05D008098 1.4e-122 444.1 514 48.4
Eucgr.K02350 Eucalyptus grandis HOM05D006455 ORTHO05D008098 1.2e-121 441.0 518 47.7
Sc05g0001610 Simmondsia chinensis HOM05D006455 ORTHO05D008098 6.1e-121 438.7 517 46.2
Peaxi162Scf00315g00814 Petunia axillaris HOM05D006455 ORTHO05D008098 3.0e-120 436.4 495 49.5
Solyc09g020150.4 Solanum lycopersicum HOM05D006455 ORTHO05D008098 2.6e-119 433.3 496 47.8
AL8G21110 Arabidopsis lyrata HOM05D006455 ORTHO05D008098 1.7e-118 430.6 520 46.9
BcaC06g30805 Brassica carinata HOM05D006455 ORTHO05D008098 4.8e-118 429.1 518 47.1
CARHR183890 Cardamine hirsuta HOM05D006455 ORTHO05D008098 1.1e-117 427.9 514 47.1
A06p39230 Brassica napus HOM05D006455 ORTHO05D008098 5.3e-117 425.6 520 47.1
BraA06t26837Z Brassica rapa HOM05D006455 ORTHO05D008098 5.3e-117 425.6 522 46.9
AT5G48340 Arabidopsis thaliana HOM05D006455 ORTHO05D008098 7.0e-117 425.2 512 46.3
Carub.0008s0792 Capsella rubella HOM05D006455 ORTHO05D008098 1.2e-116 424.5 518 46.1
PSO210G7796 Papaver somniferum HOM05D006455 ORTHO05D008098 1.5e-116 424.1 518 46.7
BcaC06g30808 Brassica carinata HOM05D006455 ORTHO05D008098 2.0e-116 423.7 520 46.5
Aa31LG5G9090 Aethionema arabicum HOM05D006455 ORTHO05D008098 2.5e-114 416.8 514 46.1
C07p39110 Brassica napus HOM05D006455 ORTHO05D008098 2.5e-114 416.8 520 46.5
BolC7t44431H Brassica oleracea HOM05D006455 ORTHO05D008098 2.5e-114 416.8 521 47.0
ATR0743G062 Amborella trichopoda HOM05D006455 ORTHO05D008098 4.2e-114 416.0 525 45.1
PSO210G0904 Papaver somniferum HOM05D006455 ORTHO05D008098 5.5e-114 415.6 517 46.0
Thhalv10003907m.g Eutrema salsugineum HOM05D006455 ORTHO05D008098 6.1e-113 412.1 498 48.4
unitig_0.g222 Utricularia gibba HOM05D006455 ORTHO05D008098 6.1e-113 412.1 515 42.5
vmacro02844 Vaccinium macrocarpon HOM05D006455 ORTHO05D008098 3.3e-111 406.4 500 48.2
SHI10210 Sapria himalayana HOM05D006455 ORTHO05D008098 2.9e-107 393.3 533 45.8
Manes.12G057900 Manihot esculenta HOM05D006455 ORTHO05D008098 1.5e-106 391.0 494 44.5
Manes.12G058105 Manihot esculenta HOM05D006455 ORTHO05D008098 2.3e-104 383.6 494 44.7
Actinidia23129 Actinidia chinensis HOM05D006455 ORTHO05D008098 1.5e-103 380.9 508 45.5
Gohir.D11G150900 Gossypium hirsutum HOM05D006455 ORTHO05D008098 2.6e-103 380.2 389 52.7
Os01g0897100 Oryza sativa ssp. japonica HOM05D006455 ORTHO05D008098 5.3e-101 372.5 513 41.9
EL10Ac5g10573 Beta vulgaris HOM05D006455 ORTHO05D008098 1.3e-99 367.9 397 50.9
Ah.11g050710 Amaranthus hybridus HOM05D006455 ORTHO05D008098 2.1e-97 360.5 516 42.2
MBI07_g34151_MAGBIO Magnolia biondii HOM05D006455 ORTHO05D008098 2.1e-97 360.5 474 45.8
Zm00001eb144730 Zea mays HOM05D006455 ORTHO05D008098 3.6e-97 359.8 504 40.3
DCAR_000439 Daucus carota HOM05D006455 ORTHO05D008098 1.3e-94 351.3 340 51.2
SEGI_16096 Sequoiadendron giganteum HOM05D006455 ORTHO05D008098 1.7e-94 350.9 528 41.7
HPP92_001271 Vanilla planifolia HOM05D006455 ORTHO05D008098 5.9e-84 315.8 328 46.6
Dinv07639 Davidia involucrata HOM05D006455 ORTHO05D008098 5.8e-79 299.3 391 41.9
Manes.12G058904 Manihot esculenta HOM05D006455 ORTHO05D008098 4.1e-77 293.1 269 55.8
PGSC0003DMG402020303 Solanum tuberosum HOM05D006455 ORTHO05D008098 2.3e-75 287.3 351 46.7
Oeu030353.1 Olea europaea HOM05D006455 ORTHO05D008098 6.0e-68 262.7 330 47.3
HPP92_001254 Vanilla planifolia HOM05D006455 ORTHO05D008098 1.5e-63 248.1 219 52.5
Manes.12G057503 Manihot esculenta HOM05D006455 ORTHO05D008098 6.6e-59 232.6 164 65.9
Manes.12G057505 Manihot esculenta HOM05D006455 ORTHO05D008098 6.6e-59 232.6 164 65.9
Mapoly0109s0061 Marchantia polymorpha HOM05D006455 ORTHO05D008098 4.4e-55 219.9 541 30.7
CDE05G1197 Ceratophyllum demersum HOM05D006455 ORTHO05D008098 7.1e-53 212.6 157 62.4
Pp3c10_13370 Physcomitrium patens HOM05D006455 ORTHO05D008098 6.0e-52 209.5 552 30.4
SMO200G0077 Selaginella moellendorffii HOM05D006455 ORTHO05D008098 4.8e-49 199.9 502 30.7
AagrBONN_evm.TU.Sc2ySwM_228.5553 Anthoceros agrestis HOM05D006455 ORTHO05D008098 4.0e-40 170.2 403 30.3
CBR_g48756 Chara braunii HOM05D006455 ORTHO05D000497 2.5e-34 151.0 407 28.7
Manes.12G057504 Manihot esculenta HOM05D006455 ORTHO05D008098 1.8e-32 144.8 200 47.5
Phvul.003G297266 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 5.7e-26 123.2 123 52.0
Manes.12G060108 Manihot esculenta HOM05D006455 ORTHO05D008098 1.2e-23 115.5 175 46.9
Oeu030354.1 Olea europaea HOM05D006455 ORTHO05D008098 2.9e-22 110.9 116 45.7
Zm00001eb128100 Zea mays HOM05D006455 ORTHO05D008098 4.2e-21 107.1 142 37.3
Zm00001eb274660 Zea mays HOM05D006455 ORTHO05D008098 2.1e-20 104.8 142 35.9
EL10Ac5g10574 Beta vulgaris HOM05D006455 ORTHO05D008098 3.5e-20 104.0 115 41.7
PGSC0003DMG400020304 Solanum tuberosum HOM05D006455 ORTHO05D008098 4.6e-20 103.6 115 43.5
Zm00001eb128090 Zea mays HOM05D006455 ORTHO05D008098 1.8e-19 101.7 173 34.1
Cre03.g197250 Chlamydomonas reinhardtii HOM05D006455 ORTHO05D008098 3.7e-17 94.0 217 31.3
Oeu003682.1 Olea europaea HOM05D006455 ORTHO05D008098 2.0e-10 71.6 117 35.0


User provided reference genes

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