Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_30339_v3 Cicer arietinum L. HOM05D008280 ORTHO05D010492 1.7e-160 569.3 289 100.0
Ca_01487_v3 Cicer arietinum L. HOM05D033364 ORTHO05D030825 1.3e-48 197.6 93 100.0
Medtr0141s0020 Medicago truncatula HOM05D008280 ORTHO05D010492 2.9e-35 153.3 146 59.6
TPR.G21718 Trifolium pratense HOM05D008280 ORTHO05D010492 2.9e-35 153.3 146 59.6
Lj5g0023723 Lotus japonicus HOM05D008280 ORTHO05D010492 4.1e-34 149.4 146 58.9
LjContig00315g0024501 Lotus japonicus HOM05D008280 ORTHO05D010492 4.1e-34 149.4 146 58.9
arahy.Tifrunner.gnm1.ann1.9X0QWA Arachis hypogaea HOM05D008280 ORTHO05D010492 7.8e-33 145.2 214 44.9
arahy.Tifrunner.gnm1.ann1.TAQ3SD Arachis hypogaea HOM05D008280 ORTHO05D010492 7.8e-33 145.2 214 44.9
arahy.Tifrunner.gnm1.ann1.U3KMBF Arachis hypogaea HOM05D008280 ORTHO05D010492 1.0e-32 144.8 255 41.2
Lalb_Chr00c29g0408141 Lupinus albus HOM05D008280 ORTHO05D010492 6.6e-32 142.1 145 56.6
CAN.G1126.5 Capsicum annuum HOM05D008280 ORTHO05D010492 8.6e-32 141.7 146 56.2
CAN.G1159.15 Capsicum annuum HOM05D008280 ORTHO05D010492 8.6e-32 141.7 146 56.2
CAN.G266.10 Capsicum annuum HOM05D008280 ORTHO05D010492 8.6e-32 141.7 146 56.2
Solyc00g020040.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 8.6e-32 141.7 146 56.2
SalBow1G8376 Salvia bowleyana HOM05D008280 ORTHO05D010492 1.9e-31 140.6 146 55.5
Nn1g10160 Nelumbo nucifera HOM05D008280 ORTHO05D010492 5.6e-31 139.0 146 54.8
Sed0015016 Sechium edule HOM05D008280 ORTHO05D010492 5.6e-31 139.0 146 54.8
DCAR_032445 Daucus carota HOM05D008280 ORTHO05D010492 2.1e-30 137.1 146 54.1
Lj2P1227T101 Lonicera japonica HOM05D008280 ORTHO05D010492 2.1e-30 137.1 146 54.8
RcHm_v2.0_MTg0498291 Rosa chinensis HOM05D008280 ORTHO05D010492 2.8e-30 136.7 146 54.8
ATMG00110 Arabidopsis thaliana HOM05D008280 ORTHO05D010492 4.7e-30 136.0 145 55.2
BNapus_Darmor_BZH_scaffold_234p00070 Brassica napus HOM05D008280 ORTHO05D010492 4.7e-30 136.0 145 55.2
BolSC28t60354H Brassica oleracea HOM05D008280 ORTHO05D010492 4.7e-30 136.0 145 55.2
BraSC159t45719Z Brassica rapa HOM05D008280 ORTHO05D010492 4.7e-30 136.0 145 55.2
BraSC77t46666Z Brassica rapa HOM05D008280 ORTHO05D010492 4.7e-30 136.0 145 55.2
CARHR282640 Cardamine hirsuta HOM05D008280 ORTHO05D010492 4.7e-30 136.0 145 55.2
Sp3g25740 Schrenkiella parvula HOM05D008280 ORTHO05D010492 4.7e-30 136.0 145 55.2
BraSC48t46257Z Brassica rapa HOM05D008280 ORTHO05D010492 1.1e-29 134.8 145 54.5
CAN.G72.16 Capsicum annuum HOM05D008280 ORTHO05D010492 5.2e-29 132.5 145 53.8
HanXRQMTg0579251 Helianthus annuus HOM05D008280 ORTHO05D010492 8.9e-29 131.7 146 53.4
Lsat_1_v5_gn_7_99841 Lactuca sativa HOM05D008280 ORTHO05D010492 8.9e-29 131.7 146 53.4
Nitab4.5_0001796g0300 Nicotiana tabacum HOM05D008280 ORTHO05D010492 1.2e-28 131.3 144 53.5
Nitab4.5_0009703g0040 Nicotiana tabacum HOM05D008280 ORTHO05D010492 3.4e-28 129.8 145 53.8
Potri.007G061721 Populus trichocarpa HOM05D008280 ORTHO05D010492 1.3e-27 127.9 144 53.5
CANSAT16G0019 Cannabis sativa HOM05D008280 ORTHO05D010492 1.7e-27 127.5 146 53.4
MBI05_g23314_MAGBIO Magnolia biondii HOM05D008280 ORTHO05D010492 1.6e-25 120.9 139 52.5
Psat1g132520 Pisum sativum HOM05D008280 ORTHO05D010492 2.1e-25 120.6 63 95.2
unitig_87.g27971 Utricularia gibba HOM05D008280 ORTHO05D010492 2.1e-25 120.6 63 93.7
CAN.G21.55 Capsicum annuum HOM05D008280 ORTHO05D010492 4.6e-25 119.4 63 92.1
Medtr0094s0120 Medicago truncatula HOM05D008280 ORTHO05D010492 7.8e-25 118.6 139 48.9
Nitab4.5_0000978g0030 Nicotiana tabacum HOM05D008280 ORTHO05D010492 3.3e-23 113.2 63 88.9
CAN.G362.37 Capsicum annuum HOM05D008280 ORTHO05D010492 2.1e-22 110.5 141 47.5
Solyc11g028160.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 6.2e-22 109.0 63 85.7
Eucgr.E02151 Eucalyptus grandis HOM05D008280 ORTHO05D010492 4.0e-21 106.3 132 48.5
CAN.G676.27 Capsicum annuum HOM05D008280 ORTHO05D010492 5.2e-21 105.9 63 82.5
Lsat_1_v5_gn_7_96601 Lactuca sativa HOM05D008280 ORTHO05D010492 6.8e-21 105.5 63 82.5
Ca_31226_v3 Cicer arietinum L. HOM05D008280 ORTHO05D010492 7.6e-20 102.1 56 96.4
TAR371G0473 Trochodendron aralioides HOM05D008280 ORTHO05D010492 1.9e-18 97.4 140 47.1
Nitab4.5_0004471g0100 Nicotiana tabacum HOM05D008280 ORTHO05D010492 2.4e-18 97.1 132 47.7
Gohir.A13G092605 Gossypium hirsutum HOM05D008280 ORTHO05D010492 3.3e-15 86.7 50 88.0
HanXRQChr03g0087181 Helianthus annuus HOM05D008280 ORTHO05D010492 3.6e-14 83.2 63 69.8
VMungo0985G0011 Vigna mungo HOM05D008696 ORTHO05D002807 6.2e-14 82.4 61 70.5
QL08p039717 Quercus lobata HOM05D008280 ORTHO05D010492 4.4e-12 76.3 50 76.0
Lj2C1224T22 Lonicera japonica HOM05D008280 ORTHO05D010492 8.4e-11 72.0 39 89.7
Sed0028122 Sechium edule HOM05D008280 ORTHO05D010492 6.6e-08 62.4 111 39.6
Sc04g0005550 Simmondsia chinensis HOM05D008280 ORTHO05D051001 2.8e-06 57.0 49 57.1


User provided reference genes

Program Settings