Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_30169_v3 Cicer arietinum L. HOM05D006992 ORTHO05D008752 3.3e-98 361.7 178 100.0
Ca_09397_v3 Cicer arietinum L. HOM05D006992 ORTHO05D008752 5.7e-95 350.9 172 100.0
TPR.G6916 Trifolium pratense HOM05D006992 ORTHO05D008752 1.2e-68 263.5 176 76.7
Psat0s2796g0040 Pisum sativum HOM05D006992 ORTHO05D008752 2.6e-63 245.7 176 73.3
Medtr7g114390 Medicago truncatula HOM05D006992 ORTHO05D008752 9.3e-61 237.3 175 71.4
Glyma.03G244000 Glycine max HOM05D006992 ORTHO05D008752 7.8e-60 234.2 172 69.2
Glyma.19G241400 Glycine max HOM05D006992 ORTHO05D008752 8.7e-59 230.7 172 68.0
VMungo0540G1333 Vigna mungo HOM05D006992 ORTHO05D008752 1.3e-57 226.9 174 67.8
Phvul.006G097900 Phaseolus vulgaris HOM05D006992 ORTHO05D008752 2.8e-57 225.7 175 66.9
CiPaw.07G008900 Carya illinoinensis HOM05D006992 ORTHO05D008752 6.2e-57 224.6 152 71.7
Lj1g0025869 Lotus japonicus HOM05D006992 ORTHO05D008752 8.1e-57 224.2 169 68.6
Cfa006481 Carpinus fangiana HOM05D006992 ORTHO05D008752 2.4e-56 222.6 163 68.7
CiPaw.08G178000 Carya illinoinensis HOM05D006992 ORTHO05D008752 1.3e-54 216.9 152 70.4
Nn3g21348 Nelumbo nucifera HOM05D006992 ORTHO05D008752 9.3e-53 210.7 152 70.4
Thecc.05G291400 Theobroma cacao HOM05D006992 ORTHO05D008752 9.3e-53 210.7 152 67.8
CANSAT54G1892 Cannabis sativa HOM05D006992 ORTHO05D008752 2.7e-52 209.1 152 67.8
QL03p000176 Quercus lobata HOM05D006992 ORTHO05D008752 2.7e-52 209.1 152 65.1
QL03p000513 Quercus lobata HOM05D006992 ORTHO05D008752 2.7e-52 209.1 152 65.1
Hund06999 Selenicereus undatus HOM05D006992 ORTHO05D008752 6.0e-52 208.0 152 67.1
Oeu012474.1 Olea europaea HOM05D006992 ORTHO05D008752 1.0e-51 207.2 152 67.8
Atru.chr2.657 Acer truncatum HOM05D006992 ORTHO05D008752 1.8e-51 206.5 151 68.9
CSS0031345 Camellia sinensis var. sinensis HOM05D006992 ORTHO05D008752 2.3e-51 206.1 153 68.6
Prupe.6G337300 Prunus persica HOM05D006992 ORTHO05D008752 2.3e-51 206.1 150 67.3
COL.COLO4_13636 Corchorus olitorius HOM05D004868 ORTHO05D006030 3.9e-51 205.3 152 65.1
Actinidia33837 Actinidia chinensis HOM05D006992 ORTHO05D008752 5.1e-51 204.9 152 67.8
CAN.G424.13 Capsicum annuum HOM05D006992 ORTHO05D008752 5.1e-51 204.9 160 65.0
arahy.Tifrunner.gnm1.ann1.26USVU Arachis hypogaea HOM05D006992 ORTHO05D008752 6.7e-51 204.5 152 65.8
Rhsim05G0148900 Rhododendron simsii HOM05D006992 ORTHO05D008752 6.7e-51 204.5 169 62.7
Sed0003148 Sechium edule HOM05D006992 ORTHO05D008752 6.7e-51 204.5 152 67.1
arahy.Tifrunner.gnm1.ann1.ZZK2AU Arachis hypogaea HOM05D006992 ORTHO05D008752 1.5e-50 203.4 152 65.1
Ciclev10002483m.g Citrus clementina HOM05D006992 ORTHO05D008752 1.5e-50 203.4 152 67.8
MELO3C015384.2 Cucumis melo HOM05D006992 ORTHO05D008752 1.5e-50 203.4 152 66.4
Eucgr.B01740 Eucalyptus grandis HOM05D006992 ORTHO05D008752 1.5e-50 203.4 150 66.7
FvH4_6g03930 Fragaria vesca HOM05D006992 ORTHO05D008752 1.5e-50 203.4 151 66.2
Lalb_Chr18g0045231 Lupinus albus HOM05D006992 ORTHO05D008752 1.5e-50 203.4 157 65.6
ClCG03G016340 Citrullus lanatus HOM05D006992 ORTHO05D008752 1.9e-50 203.0 165 63.0
PGR083G1999 Punica granatum HOM05D006992 ORTHO05D008752 1.9e-50 203.0 152 65.1
FAN09G1577 Fragaria x ananassa HOM05D000167 ORTHO05D000640 4.3e-50 201.8 151 65.6
RcHm_v2.0_Chr3g0452481 Rosa chinensis HOM05D006992 ORTHO05D008752 7.4e-50 201.1 151 64.9
Sc09g0003710 Simmondsia chinensis HOM05D006992 ORTHO05D008752 9.6e-50 200.7 153 64.7
Lsat_1_v5_gn_2_67081 Lactuca sativa HOM05D006992 ORTHO05D008752 2.8e-49 199.1 151 65.6
FAN05G0877 Fragaria x ananassa HOM05D000167 ORTHO05D000640 3.7e-49 198.7 151 64.2
CDE02G3150 Ceratophyllum demersum HOM05D006992 ORTHO05D008752 4.8e-49 198.4 154 63.0
FAN14G0596 Fragaria x ananassa HOM05D006992 ORTHO05D008752 4.8e-49 198.4 151 64.2
Nitab4.5_0004284g0080 Nicotiana tabacum HOM05D006992 ORTHO05D008752 6.2e-49 198.0 168 62.5
FAN02G1922 Fragaria x ananassa HOM05D000167 ORTHO05D000640 8.1e-49 197.6 151 64.2
Cc02_g31290 Coffea canephora HOM05D006992 ORTHO05D008752 1.1e-48 197.2 137 72.3
Migut.N01946 Erythranthe guttata HOM05D006992 ORTHO05D008752 1.1e-48 197.2 173 57.8
FAN05G5181 Fragaria x ananassa HOM05D006992 ORTHO05D008752 1.1e-48 197.2 151 63.6
CsaV3_1G039620 Cucumis sativus L. HOM05D006992 ORTHO05D008752 2.4e-48 196.1 153 64.1
Gorai.013G122400 Gossypium raimondii HOM05D006992 ORTHO05D008752 2.4e-48 196.1 151 63.6
MD12G1234200 Malus domestica HOM05D006992 ORTHO05D008752 4.0e-48 195.3 151 64.2
Nitab4.5_0001410g0140 Nicotiana tabacum HOM05D006992 ORTHO05D008752 5.3e-48 194.9 168 61.9
vmacro19674 Vaccinium macrocarpon HOM05D006992 ORTHO05D008752 5.3e-48 194.9 164 60.4
AUR62005014 Chenopodium quinoa HOM05D006992 ORTHO05D008752 6.9e-48 194.5 152 63.8
Gohir.A13G106100 Gossypium hirsutum HOM05D006992 ORTHO05D008752 6.9e-48 194.5 151 63.6
Gohir.D13G108900 Gossypium hirsutum HOM05D006992 ORTHO05D008752 6.9e-48 194.5 151 62.9
Solyc02g079130.3 Solanum lycopersicum HOM05D006992 ORTHO05D008752 9.0e-48 194.1 151 61.6
Sopen02g023930 Solanum pennellii HOM05D006992 ORTHO05D008752 1.2e-47 193.7 151 61.6
Gohir.D11G266700 Gossypium hirsutum HOM05D006992 ORTHO05D008752 1.5e-47 193.4 152 61.2
Sabra13G0033300 Salix brachista HOM05D006992 ORTHO05D008752 1.5e-47 193.4 152 61.8
TWI36G0139 Tripterygium wilfordii HOM05D006992 ORTHO05D008752 2.0e-47 193.0 152 63.8
TAR633G1762 Trochodendron aralioides HOM05D006992 ORTHO05D008752 2.0e-47 193.0 152 63.8
HanXRQChr14g0445751 Helianthus annuus HOM05D006992 ORTHO05D008752 7.6e-47 191.0 148 63.5
PGSC0003DMG400022358 Solanum tuberosum HOM05D006992 ORTHO05D008752 7.6e-47 191.0 151 61.6
DCAR_022834 Daucus carota HOM05D006992 ORTHO05D008752 9.9e-47 190.7 156 62.2
Potri.013G034100 Populus trichocarpa HOM05D006992 ORTHO05D008752 9.9e-47 190.7 152 63.2
Gorai.007G286500 Gossypium raimondii HOM05D006992 ORTHO05D008752 1.3e-46 190.3 152 60.5
PSO210G3204 Papaver somniferum HOM05D006992 ORTHO05D008752 1.3e-46 190.3 159 60.4
AUR62000954 Chenopodium quinoa HOM05D006992 ORTHO05D008752 1.7e-46 189.9 152 62.5
PSO832G0773 Papaver somniferum HOM05D006992 ORTHO05D008752 1.7e-46 189.9 159 60.4
THA.LOC104818652 Tarenaya hassleriana HOM05D006992 ORTHO05D008752 1.7e-46 189.9 152 60.5
Manes.09G157800 Manihot esculenta HOM05D006992 ORTHO05D008752 2.2e-46 189.5 163 59.5
EL10Ac4g09207 Beta vulgaris HOM05D006992 ORTHO05D008752 6.4e-46 188.0 152 61.8
Gohir.A11G256900 Gossypium hirsutum HOM05D006992 ORTHO05D008752 2.4e-45 186.0 148 60.1
SGA_v2.0_scaffold80G25908 Striga asiatica HOM05D006992 ORTHO05D008752 4.2e-45 185.3 151 61.6
Carub.0003s0417 Capsella rubella HOM05D006992 ORTHO05D008752 1.2e-44 183.7 152 59.2
ATR0706G207 Amborella trichopoda HOM05D006992 ORTHO05D008752 2.1e-44 183.0 140 61.4
Peaxi162Scf00103g00035 Petunia axillaris HOM05D006992 ORTHO05D008752 2.7e-44 182.6 137 65.7
AL3G15290 Arabidopsis lyrata HOM05D006992 ORTHO05D008752 3.5e-44 182.2 152 58.6
SalBow3G4063 Salvia bowleyana HOM05D006992 ORTHO05D008752 3.5e-44 182.2 152 58.6
ECA238G1326 Erigeron canadensis HOM05D006992 ORTHO05D008752 4.6e-44 181.8 136 67.6
AT3G04950 Arabidopsis thaliana HOM05D006992 ORTHO05D008752 7.9e-44 181.0 152 58.6
CARHR079260 Cardamine hirsuta HOM05D006992 ORTHO05D008752 1.0e-43 180.6 152 58.6
Thhalv10021439m.g Eutrema salsugineum HOM05D006992 ORTHO05D008752 2.3e-43 179.5 152 58.6
Aqoxy5G00680 Aquilegia oxysepala HOM05D006992 ORTHO05D008752 6.7e-43 177.9 174 54.6
GSVIVG01021889001 Vitis vinifera HOM05D006992 ORTHO05D008752 6.7e-43 177.9 137 65.0
BraA03t12570Z Brassica rapa HOM05D006992 ORTHO05D008752 3.3e-42 175.6 152 57.2
Sp3g03770 Schrenkiella parvula HOM05D006992 ORTHO05D008752 4.3e-42 175.3 156 55.1
BolC3t16415H Brassica oleracea HOM05D006992 ORTHO05D008752 9.6e-42 174.1 152 56.6
A03p33950 Brassica napus HOM05D003164 ORTHO05D003575 1.6e-41 173.3 152 56.6
BcaC01g04339 Brassica carinata HOM05D006992 ORTHO05D008752 2.1e-41 172.9 152 55.9
C03p41330 Brassica napus HOM05D003164 ORTHO05D003575 2.1e-41 172.9 152 55.9
BcaB04g19286 Brassica carinata HOM05D006992 ORTHO05D008752 4.8e-41 171.8 152 55.3
Os06g0298500 Oryza sativa ssp. japonica HOM05D006992 ORTHO05D008752 1.8e-40 169.9 151 55.6
Migut.N01944 Erythranthe guttata HOM05D006992 ORTHO05D008752 3.1e-40 169.1 150 57.3
Dinv17742 Davidia involucrata HOM05D004868 ORTHO05D006030 1.2e-39 167.2 101 77.2
Lj7A478T92 Lonicera japonica HOM05D006992 ORTHO05D008752 1.3e-38 163.7 230 43.5
Zm00001eb381040 Zea mays HOM05D006992 ORTHO05D008752 2.1e-36 156.4 151 53.0
SEGI_08689 Sequoiadendron giganteum HOM05D006992 ORTHO05D008752 1.0e-35 154.1 150 52.7
HPP92_017993 Vanilla planifolia HOM05D006992 ORTHO05D008752 1.8e-35 153.3 151 50.3
HPP92_026697 Vanilla planifolia HOM05D006992 ORTHO05D008752 2.3e-35 152.9 151 50.3
SEGI_13740 Sequoiadendron giganteum HOM05D006992 ORTHO05D008752 1.3e-33 147.1 176 43.8
unitig_746.g26840 Utricularia gibba HOM05D006992 ORTHO05D008752 4.8e-33 145.2 99 66.7
PSO210G4341 Papaver somniferum HOM05D006992 ORTHO05D008752 4.5e-31 138.7 152 50.7
PSO384G0024 Papaver somniferum HOM05D006992 ORTHO05D008752 1.3e-30 137.1 172 46.5
PSO339G2351 Papaver somniferum HOM05D006992 ORTHO05D008752 6.5e-30 134.8 152 48.7
Haze_04310 Corylus avellana HOM05D006992 ORTHO05D008752 5.5e-29 131.7 111 61.3
RcHm_v2.0_Chr3g0452521 Rosa chinensis HOM05D006992 ORTHO05D008752 2.3e-19 99.8 86 58.1
Cpa.g.sc117.39 Carica papaya HOM05D004868 ORTHO05D006030 6.7e-19 98.2 54 85.2
VMungo0331G0785 Vigna mungo HOM05D006992 ORTHO05D008752 1.5e-18 97.1 78 61.5
RcHm_v2.0_Chr6g0246461 Rosa chinensis HOM05D006992 ORTHO05D008752 1.7e-17 93.6 61 68.9
FAN05G0951 Fragaria x ananassa HOM05D000167 ORTHO05D000640 3.7e-17 92.4 103 50.5
RcHm_v2.0_Chr1g0321781 Rosa chinensis HOM05D006992 ORTHO05D008752 4.8e-17 92.0 61 67.2
Gohir.D03G094700 Gossypium hirsutum HOM05D006992 ORTHO05D008752 5.3e-16 88.6 54 72.2
SMO361G0250 Selaginella moellendorffii HOM05D006992 ORTHO05D008752 2.3e-11 73.2 126 35.7
Gohir.D07G141600 Gossypium hirsutum HOM05D006992 ORTHO05D008752 1.1e-10 70.9 39 79.5
Gorai.001G169400 Gossypium raimondii HOM05D006992 ORTHO05D008752 2.6e-10 69.7 39 76.9
Gohir.D12G044200 Gossypium hirsutum HOM05D006992 ORTHO05D008752 1.3e-09 67.4 39 74.4


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