Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_30097_v3 Cicer arietinum L. HOM05D001046 ORTHO05D005883 9.5e-270 932.9 479 100.0
Psat0s251g0040 Pisum sativum HOM05D001046 ORTHO05D005883 7.5e-158 561.2 445 69.2
Medtr0010s0220 Medicago truncatula HOM05D001046 ORTHO05D005883 8.1e-152 541.2 445 67.6
Lj2g0002950 Lotus japonicus HOM05D001046 ORTHO05D005883 1.3e-149 533.9 447 66.4
arahy.Tifrunner.gnm1.ann1.X1G7WL Arachis hypogaea HOM05D001046 ORTHO05D005883 4.4e-142 508.8 447 63.5
Glyma.01G093902 Glycine max HOM05D001046 ORTHO05D005883 2.9e-141 506.1 453 63.6
Lalb_Chr04g0255081 Lupinus albus HOM05D001046 ORTHO05D005883 3.8e-141 505.8 459 63.2
Phvul.003G034100 Phaseolus vulgaris HOM05D001046 ORTHO05D005883 4.9e-141 505.4 446 63.5
arahy.Tifrunner.gnm1.ann1.L5PVB5 Arachis hypogaea HOM05D001046 ORTHO05D005883 2.4e-140 503.1 447 63.5
Glyma.02G128900 Glycine max HOM05D001046 ORTHO05D005883 1.0e-138 497.7 453 63.4
Cfa008799 Carpinus fangiana HOM05D001046 ORTHO05D005883 7.1e-124 448.4 447 57.0
TWI79G0779 Tripterygium wilfordii HOM05D001046 ORTHO05D005883 1.3e-122 444.1 447 55.5
FAN12G0380 Fragaria x ananassa HOM05D001046 ORTHO05D005883 1.8e-122 443.7 446 55.2
Prupe.1G300500 Prunus persica HOM05D001046 ORTHO05D005883 2.3e-122 443.4 446 55.8
Thecc.02G315500 Theobroma cacao HOM05D001046 ORTHO05D005883 3.9e-122 442.6 447 55.0
FvH4_4g28521 Fragaria vesca HOM05D001046 ORTHO05D005883 6.7e-122 441.8 446 54.9
Gorai.008G173700 Gossypium raimondii HOM05D001046 ORTHO05D005883 8.7e-122 441.4 447 54.6
MD16G1051700 Malus domestica HOM05D001046 ORTHO05D005883 4.3e-121 439.1 445 55.3
Ciclev10030592m.g Citrus clementina HOM05D001046 ORTHO05D005883 5.6e-121 438.7 443 55.3
Gohir.D12G160700 Gossypium hirsutum HOM05D001046 ORTHO05D005883 1.3e-120 437.6 447 54.4
Atru.chr11.1438 Acer truncatum HOM05D001046 ORTHO05D005883 1.6e-120 437.2 462 53.2
Atru.chr11.1468 Acer truncatum HOM05D001046 ORTHO05D005883 1.6e-120 437.2 462 53.2
Gohir.A12G157800 Gossypium hirsutum HOM05D001046 ORTHO05D005883 2.8e-120 436.4 447 54.4
FAN17G2519 Fragaria x ananassa HOM05D001046 ORTHO05D005883 3.7e-120 436.0 446 54.3
RcHm_v2.0_Chr4g0436541 Rosa chinensis HOM05D001046 ORTHO05D005883 3.7e-120 436.0 448 54.9
GSVIVG01012023001 Vitis vinifera HOM05D001046 ORTHO05D005883 3.7e-120 436.0 447 54.1
Duzib248G1558 Durio zibethinus HOM05D001046 ORTHO05D005883 6.2e-120 435.3 448 54.7
Haze_11811 Corylus avellana HOM05D001046 ORTHO05D005883 1.8e-119 433.7 447 56.4
CANSAT64G1908 Cannabis sativa HOM05D001046 ORTHO05D005883 6.9e-119 431.8 447 54.8
Dinv27415 Davidia involucrata HOM05D001046 ORTHO05D005883 2.0e-118 430.3 448 54.2
TAR629G1491 Trochodendron aralioides HOM05D001046 ORTHO05D005883 7.6e-118 428.3 459 53.4
Rhsim08G0040600 Rhododendron simsii HOM05D001046 ORTHO05D005883 1.4e-116 424.1 447 53.7
Oeu002624.1 Olea europaea HOM05D001046 ORTHO05D005883 1.9e-116 423.7 445 52.1
CSS0000214 Camellia sinensis var. sinensis HOM05D001046 ORTHO05D005883 1.2e-115 421.0 447 53.9
Lj3C1023G11 Lonicera japonica HOM05D001046 ORTHO05D005883 2.7e-115 419.9 445 54.6
Sabra08G0083000 Salix brachista HOM05D001046 ORTHO05D005883 2.7e-115 419.9 447 53.0
Actinidia30169 Actinidia chinensis HOM05D001046 ORTHO05D005883 3.9e-114 416.0 447 53.9
Manes.06G076400 Manihot esculenta HOM05D001046 ORTHO05D005883 8.7e-114 414.8 449 53.0
Nitab4.5_0006347g0030 Nicotiana tabacum HOM05D001046 ORTHO05D005883 1.1e-113 414.5 445 52.6
CiPaw.05G117600 Carya illinoinensis HOM05D001046 ORTHO05D005883 1.5e-113 414.1 447 53.5
vmacro18368 Vaccinium macrocarpon HOM05D001046 ORTHO05D005883 1.5e-113 414.1 464 51.9
Potri.008G109300 Populus trichocarpa HOM05D001046 ORTHO05D005883 5.7e-113 412.1 446 52.2
Potri.T108626 Populus trichocarpa HOM05D001046 ORTHO05D005883 1.3e-112 411.0 447 52.1
Solyc05g010160.3 Solanum lycopersicum HOM05D001046 ORTHO05D005883 1.6e-112 410.6 445 51.5
HanXRQChr15g0475941 Helianthus annuus HOM05D001046 ORTHO05D005883 6.3e-112 408.7 447 51.7
Cc11_g11040 Coffea canephora HOM05D001046 ORTHO05D005883 1.1e-111 407.9 453 51.4
Aqoxy3G00421 Aquilegia oxysepala HOM05D001046 ORTHO05D005883 4.1e-111 406.0 435 53.1
THA.LOC104808446 Tarenaya hassleriana HOM05D001046 ORTHO05D005883 4.1e-111 406.0 446 51.8
MSTRG.7703 Avicennia marina HOM05D001046 ORTHO05D005883 6.9e-111 405.2 469 49.9
Sopen05g005940 Solanum pennellii HOM05D001046 ORTHO05D005883 1.5e-110 404.1 445 51.0
Eucgr.B03078 Eucalyptus grandis HOM05D001046 ORTHO05D005883 2.0e-110 403.7 447 50.3
FAN22G0985 Fragaria x ananassa HOM05D001046 ORTHO05D005883 3.2e-108 396.4 427 52.9
Nn3g17629 Nelumbo nucifera HOM05D001046 ORTHO05D005883 3.2e-108 396.4 444 50.7
Migut.L01124 Erythranthe guttata HOM05D001046 ORTHO05D005883 4.2e-108 396.0 445 50.8
PSO478G0796 Papaver somniferum HOM05D001046 ORTHO05D005883 5.5e-108 395.6 446 51.6
ATR0691G253 Amborella trichopoda HOM05D001046 ORTHO05D005883 4.6e-107 392.5 447 49.7
PSO017G2748 Papaver somniferum HOM05D001046 ORTHO05D005883 7.9e-107 391.7 447 51.9
CAN.G184.47 Capsicum annuum HOM05D001046 ORTHO05D005883 1.3e-106 391.0 445 50.3
Thhalv10006742m.g Eutrema salsugineum HOM05D001046 ORTHO05D005883 2.3e-106 390.2 446 50.7
ECA246G0060 Erigeron canadensis HOM05D001046 ORTHO05D005883 3.9e-106 389.4 445 49.9
Sc14g0007590 Simmondsia chinensis HOM05D001046 ORTHO05D005883 3.9e-106 389.4 445 50.1
FAN07G2005 Fragaria x ananassa HOM05D001046 ORTHO05D005883 6.7e-106 388.7 446 50.7
AUR62002966 Chenopodium quinoa HOM05D001046 ORTHO05D005883 1.1e-105 387.9 445 50.3
Hund25120 Selenicereus undatus HOM05D001046 ORTHO05D005883 1.9e-105 387.1 445 50.6
A07p12760 Brassica napus HOM05D001046 ORTHO05D005883 2.5e-105 386.7 443 51.7
MBI15_g18373_MAGBIO Magnolia biondii HOM05D001046 ORTHO05D005883 7.4e-105 385.2 445 49.4
SalBow8G4857 Salvia bowleyana HOM05D001046 ORTHO05D005883 2.2e-104 383.6 446 49.6
BcaB03g14057 Brassica carinata HOM05D001046 ORTHO05D005883 3.7e-104 382.9 446 49.8
BcaC06g35168 Brassica carinata HOM05D001046 ORTHO05D005883 3.7e-104 382.9 446 49.8
Sp1g22490 Schrenkiella parvula HOM05D001046 ORTHO05D005883 3.7e-104 382.9 444 49.3
ClCG05G023270 Citrullus lanatus HOM05D001046 ORTHO05D005883 8.2e-104 381.7 452 48.7
Lsat_1_v5_gn_3_62681 Lactuca sativa HOM05D001046 ORTHO05D005883 1.1e-103 381.3 435 49.9
C07p19150 Brassica napus HOM05D001046 ORTHO05D005883 2.4e-103 380.2 446 49.6
EL10Ac6g14562 Beta vulgaris HOM05D001046 ORTHO05D005883 6.9e-103 378.6 458 48.9
COL.COLO4_27721 Corchorus olitorius HOM05D001046 ORTHO05D005883 6.9e-103 378.6 448 50.2
Aa31LG7G8840 Aethionema arabicum HOM05D001046 ORTHO05D005883 1.2e-102 377.9 444 49.5
CsaV3_5G033760 Cucumis sativus L. HOM05D001046 ORTHO05D005883 4.5e-102 375.9 452 47.8
AUR62007774 Chenopodium quinoa HOM05D001046 ORTHO05D005883 5.9e-102 375.6 446 49.3
AT1G26170 Arabidopsis thaliana HOM05D001046 ORTHO05D005883 2.9e-101 373.2 446 48.9
Sed0023728 Sechium edule HOM05D001046 ORTHO05D005883 2.9e-101 373.2 431 49.4
Ah.03g138130 Amaranthus hybridus HOM05D001046 ORTHO05D005883 5.5e-100 369.0 445 48.8
CARHR025740 Cardamine hirsuta HOM05D001046 ORTHO05D005883 7.2e-100 368.6 446 48.2
Carub.0001s2479 Capsella rubella HOM05D001046 ORTHO05D005883 6.1e-99 365.5 446 48.0
AL1G39580 Arabidopsis lyrata HOM05D001046 ORTHO05D005883 3.0e-98 363.2 446 47.8
MELO3C012192.2 Cucumis melo HOM05D001046 ORTHO05D005883 3.0e-98 363.2 483 46.0
HPP92_018028 Vanilla planifolia HOM05D001046 ORTHO05D005883 6.3e-96 355.5 448 46.4
Peaxi162Scf00188g00433 Petunia axillaris HOM05D001046 ORTHO05D005883 5.3e-95 352.4 420 48.8
BolC7t42425H Brassica oleracea HOM05D001046 ORTHO05D005883 1.7e-93 347.4 448 46.4
Nitab4.5_0000259g0330 Nicotiana tabacum HOM05D001046 ORTHO05D005883 5.0e-93 345.9 495 44.4
SEGI_15773 Sequoiadendron giganteum HOM05D001046 ORTHO05D005883 8.5e-93 345.1 449 43.9
SGA_v2.0_scaffold16G07861 Striga asiatica HOM05D001046 ORTHO05D005883 4.2e-92 342.8 452 46.0
PGR102G1932 Punica granatum HOM05D001046 ORTHO05D005883 7.2e-92 342.0 440 46.4
VMungo1215G2127 Vigna mungo HOM05D001046 ORTHO05D005883 4.7e-91 339.3 338 57.1
CDE04G1715 Ceratophyllum demersum HOM05D001046 ORTHO05D005883 3.7e-88 329.7 445 44.3
SGA_v2.0_scaffold32G13175 Striga asiatica HOM05D001046 ORTHO05D005883 4.1e-79 299.7 447 42.1
Pp3c3_32130 Physcomitrium patens HOM05D001046 ORTHO05D005883 1.9e-68 264.2 464 38.1
QL03p044469 Quercus lobata HOM05D001046 ORTHO05D005883 2.7e-67 260.4 170 77.6
DCAR_023709 Daucus carota HOM05D001046 ORTHO05D005883 4.7e-67 259.6 448 37.5
unitig_699.g19897 Utricularia gibba HOM05D001046 ORTHO05D005883 1.4e-58 231.5 445 34.8
Psat6g019360 Pisum sativum HOM05D001046 ORTHO05D005883 7.0e-55 219.2 156 75.0
CBR_g23906 Chara braunii HOM05D001046 ORTHO05D005883 5.6e-52 209.5 463 31.3
QL03p044493 Quercus lobata HOM05D001046 ORTHO05D005883 1.2e-51 208.4 176 63.6
CBR_g22326 Chara braunii HOM05D001046 ORTHO05D005883 1.2e-49 201.8 484 29.1
Psat0ss9065g0080 Pisum sativum HOM05D003718 ORTHO05D004402 1.3e-48 198.4 131 78.6
SMO144G0070 Selaginella moellendorffii HOM05D001046 ORTHO05D005883 1.1e-39 168.7 401 31.7
VMungo1215G0456 Vigna mungo HOM05D001046 ORTHO05D005883 1.0e-37 162.2 112 75.0
SGA_v2.0_scaffold32G13185 Striga asiatica HOM05D001046 ORTHO05D005883 2.4e-31 141.0 132 56.1
MCO16G117 Micromonas commoda HOM05D001046 ORTHO05D005883 3.4e-25 120.6 357 30.5
SGA_v2.0_scaffold32G13101 Striga asiatica HOM05D001046 ORTHO05D005883 4.2e-23 113.6 184 39.7
Os06g0274100 Oryza sativa ssp. japonica HOM05D001046 ORTHO05D005883 5.4e-15 86.7 84 58.3
Psat1g160480 Pisum sativum HOM05D001046 ORTHO05D005883 6.2e-11 73.2 41 78.0
Lj2g0010388 Lotus japonicus HOM05D001046 ORTHO05D005883 4.5e-09 67.0 54 68.5
Lj5g0008258 Lotus japonicus HOM05D001046 ORTHO05D005883 1.1e-07 62.4 37 86.5
Psat0s439g0040 Pisum sativum HOM05D001046 ORTHO05D005883 1.1e-07 62.4 37 67.6


User provided reference genes

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