Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_18836_v3 Cicer arietinum L. HOM05D012347 ORTHO05D009427 1.8e-66 255.8 130 100.0
Ca_30095_v3 Cicer arietinum L. HOM05D012347 ORTHO05D009427 1.8e-66 255.8 130 100.0
Psat7g160160 Pisum sativum HOM05D012347 ORTHO05D009427 5.8e-36 154.5 131 64.9
Medtr4g081500 Medicago truncatula HOM05D012347 ORTHO05D009427 1.9e-34 149.4 131 64.9
Lj3g0021987 Lotus japonicus HOM05D012347 ORTHO05D009427 1.8e-29 132.9 134 56.0
TPR.G34097 Trifolium pratense HOM05D012347 ORTHO05D009427 2.2e-27 125.9 132 59.1
TPR.G21003 Trifolium pratense HOM05D012347 ORTHO05D009427 8.6e-24 114.0 115 60.9
Glyma.06G263300 Glycine max HOM05D012347 ORTHO05D009427 7.3e-23 110.9 141 45.4
Lalb_Chr19g0134651 Lupinus albus HOM05D012347 ORTHO05D009427 2.8e-22 109.0 142 47.2
Phvul.011G145600 Phaseolus vulgaris HOM05D012347 ORTHO05D009427 1.8e-21 106.3 135 50.4
Glyma.12G139100 Glycine max HOM05D012347 ORTHO05D009427 7.8e-17 90.9 140 45.7
arahy.Tifrunner.gnm1.ann1.4E7PXM Arachis hypogaea HOM05D012347 ORTHO05D009427 6.6e-16 87.8 137 43.8
Duzib213G0681 Durio zibethinus HOM05D009454 ORTHO05D009427 7.3e-15 84.3 148 42.6
arahy.Tifrunner.gnm1.ann1.T2T8RF Arachis hypogaea HOM05D012347 ORTHO05D009427 2.1e-14 82.8 137 43.1
Duzib170G0628 Durio zibethinus HOM05D009454 ORTHO05D009427 4.4e-12 75.1 134 39.6
Haze_09576 Corylus avellana HOM05D009454 ORTHO05D009427 1.3e-11 73.6 140 40.7
Migut.H01874 Erythranthe guttata HOM05D017288 ORTHO05D009427 1.1e-10 70.5 136 39.7
Gorai.009G428800 Gossypium raimondii HOM05D009454 ORTHO05D009427 5.4e-10 68.2 146 37.0
Gohir.A04G023500 Gossypium hirsutum HOM05D009454 ORTHO05D009427 7.1e-10 67.8 146 37.0
MD11G1229800 Malus domestica HOM05D023596 ORTHO05D009427 1.2e-09 67.0 132 40.2
TWI38G2182 Tripterygium wilfordii HOM05D009454 ORTHO05D009427 1.2e-09 67.0 149 38.3
TAR629G2024 Trochodendron aralioides HOM05D009454 ORTHO05D009427 1.2e-09 67.0 139 36.0
CiPaw.11G180600 Carya illinoinensis HOM05D009454 ORTHO05D009427 4.6e-09 65.1 145 36.6
Prupe.4G197700 Prunus persica HOM05D009454 ORTHO05D009427 6.0e-09 64.7 138 36.2
MELO3C016602.2 Cucumis melo HOM05D023599 ORTHO05D009427 1.3e-08 63.5 154 33.8
Nn1g06922 Nelumbo nucifera HOM05D009454 ORTHO05D009427 1.3e-08 63.5 135 37.0
Dinv03958 Davidia involucrata HOM05D009454 ORTHO05D009427 1.7e-08 63.2 135 34.1
Eucgr.K03519 Eucalyptus grandis HOM05D012347 ORTHO05D009427 2.3e-08 62.8 145 33.1
Glyma.13G284800 Glycine max HOM05D023503 ORTHO05D009427 3.0e-08 62.4 75 49.3
Gohir.A01G072300 Gossypium hirsutum HOM05D009454 ORTHO05D009427 3.0e-08 62.4 137 34.3
ClCG10G006150 Citrullus lanatus HOM05D023599 ORTHO05D009427 3.9e-08 62.0 149 32.9
TAR627G0356 Trochodendron aralioides HOM05D009454 ORTHO05D009427 3.9e-08 62.0 142 38.0
arahy.Tifrunner.gnm1.ann1.AXBA9A Arachis hypogaea HOM05D062896 ORTHO05D009427 5.1e-08 61.6 165 32.1
Ciclev10009866m.g Citrus clementina HOM05D009454 ORTHO05D009427 5.1e-08 61.6 145 37.9
Solyc07g063910.4 Solanum lycopersicum HOM05D017076 ORTHO05D017865 8.7e-08 60.8 142 37.3
Actinidia35306 Actinidia chinensis HOM05D009454 ORTHO05D009427 1.9e-07 59.7 137 37.2
Gohir.D01G059100 Gossypium hirsutum HOM05D009454 ORTHO05D009427 2.5e-07 59.3 137 32.1
Gohir.D05G363800 Gossypium hirsutum HOM05D009454 ORTHO05D009427 3.3e-07 58.9 140 33.6
TAR624G0118 Trochodendron aralioides HOM05D009454 ORTHO05D009427 4.3e-07 58.5 145 34.5
Gorai.002G080100 Gossypium raimondii HOM05D009454 ORTHO05D009427 5.6e-07 58.2 137 31.4
Thecc.07G059700 Theobroma cacao HOM05D009454 ORTHO05D009427 5.6e-07 58.2 146 35.6
Sed0000886 Sechium edule HOM05D023599 ORTHO05D009427 9.6e-07 57.4 139 34.5
CsaV3_3G005700 Cucumis sativus L. HOM05D023599 ORTHO05D009427 1.3e-06 57.0 153 32.7
TAR626G0489 Trochodendron aralioides HOM05D009454 ORTHO05D009427 1.6e-06 56.6 135 30.4
Hund02152 Selenicereus undatus HOM05D017899 ORTHO05D009427 2.1e-06 56.2 140 35.0
TWI38G2011 Tripterygium wilfordii HOM05D010083 ORTHO05D009427 2.1e-06 56.2 145 36.6
arahy.Tifrunner.gnm1.ann1.DC9CZQ Arachis hypogaea HOM05D062896 ORTHO05D009427 2.8e-06 55.8 82 41.5
TWI36G0330 Tripterygium wilfordii HOM05D035254 ORTHO05D031288 3.6e-06 55.5 134 34.3


User provided reference genes

Program Settings