Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_30067_v3 Cicer arietinum L. HOM05D006042 ORTHO05D007658 7.1e-156 553.9 283 100.0
Ca_26178_v3 Cicer arietinum L. HOM05D006042 ORTHO05D007658 5.9e-134 481.1 246 100.0
Psat1g013000 Pisum sativum HOM05D006042 ORTHO05D007658 3.8e-133 478.4 283 84.5
TPR.G32447 Trifolium pratense HOM05D006042 ORTHO05D007658 5.5e-132 474.6 283 83.4
Medtr6g017260 Medicago truncatula HOM05D006042 ORTHO05D007658 6.3e-120 434.5 286 79.7
Lj2g0022623 Lotus japonicus HOM05D006042 ORTHO05D007658 8.5e-117 424.1 291 75.9
Glyma.19G045600 Glycine max HOM05D006042 ORTHO05D007658 6.3e-112 407.9 284 73.9
Phvul.004G063000 Phaseolus vulgaris HOM05D006042 ORTHO05D007658 1.1e-111 407.1 282 73.0
VMungo0464G1707 Vigna mungo HOM05D006042 ORTHO05D007658 1.1e-111 407.1 281 72.6
Lalb_Chr06g0174661 Lupinus albus HOM05D006042 ORTHO05D007658 2.9e-109 399.1 282 73.0
arahy.Tifrunner.gnm1.ann1.TWH6SW Arachis hypogaea HOM05D006042 ORTHO05D007658 2.1e-107 392.9 288 73.3
CSS0008868 Camellia sinensis var. sinensis HOM05D006042 ORTHO05D007658 6.3e-104 381.3 278 72.7
QL02p052540 Quercus lobata HOM05D006042 ORTHO05D007658 8.5e-101 370.9 280 70.4
Hma1.2p1_0550F.1_g177265 Hydrangea macrophylla HOM05D006042 ORTHO05D007658 1.6e-99 366.7 222 81.5
Actinidia26288 Actinidia chinensis HOM05D006042 ORTHO05D007658 4.7e-99 365.2 275 72.0
Manes.02G066700 Manihot esculenta HOM05D006042 ORTHO05D007658 1.0e-98 364.0 276 69.2
Ciclev10012434m.g Citrus clementina HOM05D006042 ORTHO05D007658 2.0e-97 359.8 275 69.1
Oeu030760.1 Olea europaea HOM05D006042 ORTHO05D007658 2.0e-97 359.8 261 73.2
Atru.chr8.825 Acer truncatum HOM05D006042 ORTHO05D007658 2.6e-97 359.4 283 68.6
CiPaw.03G059800 Carya illinoinensis HOM05D006042 ORTHO05D007658 3.4e-97 359.0 223 81.6
Cfa007944 Carpinus fangiana HOM05D006042 ORTHO05D007658 4.4e-97 358.6 283 69.3
Nitab4.5_0002489g0020 Nicotiana tabacum HOM05D006042 ORTHO05D007658 4.4e-97 358.6 223 81.2
Nitab4.5_0004721g0010 Nicotiana tabacum HOM05D006042 ORTHO05D007658 5.7e-97 358.2 223 80.7
CANSAT64G1085 Cannabis sativa HOM05D006042 ORTHO05D007658 7.5e-97 357.8 229 77.7
GSVIVG01036442001 Vitis vinifera HOM05D006042 ORTHO05D007658 9.8e-97 357.5 276 70.7
CARHR214100 Cardamine hirsuta HOM05D006042 ORTHO05D007658 1.3e-96 357.1 227 78.9
MD17G1074400 Malus domestica HOM05D006042 ORTHO05D007658 1.3e-96 357.1 283 67.1
Cc07_g09000 Coffea canephora HOM05D006042 ORTHO05D007658 1.7e-96 356.7 278 68.7
CsaV3_5G039130 Cucumis sativus L. HOM05D006042 ORTHO05D007658 2.8e-96 355.9 287 66.9
Eucgr.F02481 Eucalyptus grandis HOM05D006042 ORTHO05D007658 2.8e-96 355.9 270 70.0
Solyc03g034170.4 Solanum lycopersicum HOM05D006042 ORTHO05D007658 2.8e-96 355.9 222 79.7
AL7G51880 Arabidopsis lyrata HOM05D006042 ORTHO05D007658 6.3e-96 354.8 222 80.2
Sopen03g006950 Solanum pennellii HOM05D006042 ORTHO05D007658 6.3e-96 354.8 222 79.3
PGSC0003DMG400019582 Solanum tuberosum HOM05D006042 ORTHO05D007658 6.3e-96 354.8 262 70.6
CAN.G995.2 Capsicum annuum HOM05D006042 ORTHO05D007658 1.4e-95 353.6 280 67.1
Potri.004G102100 Populus trichocarpa HOM05D006042 ORTHO05D007658 2.4e-95 352.8 223 78.0
Gohir.A11G162500 Gossypium hirsutum HOM05D006042 ORTHO05D007658 3.1e-95 352.4 224 77.7
Potri.017G112700 Populus trichocarpa HOM05D006042 ORTHO05D007658 3.1e-95 352.4 272 68.8
ClCG11G005350 Citrullus lanatus HOM05D006042 ORTHO05D007658 9.1e-95 350.9 226 78.8
Gorai.007G180300 Gossypium raimondii HOM05D006042 ORTHO05D007658 1.6e-94 350.1 224 77.2
Aqoxy3G03922 Aquilegia oxysepala HOM05D006042 ORTHO05D007658 2.0e-94 349.7 277 65.7
Gohir.D11G168732 Gossypium hirsutum HOM05D006042 ORTHO05D007658 2.0e-94 349.7 224 76.8
Sp1g29720 Schrenkiella parvula HOM05D006042 ORTHO05D007658 2.0e-94 349.7 222 79.7
BcaC08g44400 Brassica carinata HOM05D006042 ORTHO05D007658 2.7e-94 349.4 263 69.2
Duzib138G1312 Durio zibethinus HOM05D006042 ORTHO05D007658 3.5e-94 349.0 224 77.2
BraA07t29682Z Brassica rapa HOM05D006042 ORTHO05D007658 4.5e-94 348.6 254 70.9
Thhalv10027870m.g Eutrema salsugineum HOM05D006042 ORTHO05D007658 4.5e-94 348.6 222 79.3
A07p19810 Brassica napus HOM05D006042 ORTHO05D007658 5.9e-94 348.2 245 73.1
C06p18330 Brassica napus HOM05D006042 ORTHO05D007658 5.9e-94 348.2 235 75.7
BolC6t37045H Brassica oleracea HOM05D006042 ORTHO05D007658 5.9e-94 348.2 235 75.7
PGR004G1523 Punica granatum HOM05D006042 ORTHO05D007658 5.9e-94 348.2 227 77.5
MD09G1084900 Malus domestica HOM05D006042 ORTHO05D007658 7.7e-94 347.8 279 67.0
PSO063G0034 Papaver somniferum HOM05D006042 ORTHO05D007658 1.0e-93 347.4 262 70.2
THA.LOC104805550 Tarenaya hassleriana HOM05D006042 ORTHO05D007658 1.0e-93 347.4 283 67.5
Carub.0007s3720 Capsella rubella HOM05D006042 ORTHO05D007658 1.3e-93 347.1 222 78.4
MSTRG.2747 Avicennia marina HOM05D006042 ORTHO05D007658 1.7e-93 346.7 281 65.5
Thecc.04G137400 Theobroma cacao HOM05D006042 ORTHO05D007658 1.7e-93 346.7 231 74.9
BcaB02g07998 Brassica carinata HOM05D006042 ORTHO05D007658 2.3e-93 346.3 245 72.7
MBI09_g41181_MAGBIO Magnolia biondii HOM05D006042 ORTHO05D007658 5.0e-93 345.1 296 65.2
TWI53G1226 Tripterygium wilfordii HOM05D006042 ORTHO05D007658 6.5e-93 344.7 200 84.0
PSO782G1563 Papaver somniferum HOM05D006042 ORTHO05D007658 8.6e-93 344.4 262 70.2
HanXRQChr14g0438681 Helianthus annuus HOM05D006042 ORTHO05D007658 1.1e-92 344.0 279 64.9
DCAR_009854 Daucus carota HOM05D006042 ORTHO05D007658 4.2e-92 342.0 263 69.6
ECA232G3341 Erigeron canadensis HOM05D006042 ORTHO05D007658 2.1e-91 339.7 280 66.8
Migut.H00201 Erythranthe guttata HOM05D006042 ORTHO05D007658 3.6e-91 339.0 219 77.2
FAN09G0627 Fragaria x ananassa HOM05D006042 ORTHO05D007658 4.7e-91 338.6 279 65.2
Prupe.3G239600 Prunus persica HOM05D006042 ORTHO05D007658 6.1e-91 338.2 196 84.7
FvH4_6g45340 Fragaria vesca HOM05D006042 ORTHO05D007658 1.4e-90 337.0 283 64.0
FAN14G4491 Fragaria x ananassa HOM05D006042 ORTHO05D007658 1.4e-90 337.0 283 64.0
Lsat_1_v5_gn_4_153081 Lactuca sativa HOM05D006042 ORTHO05D007658 1.4e-90 337.0 284 65.1
SalBow3G2575 Salvia bowleyana HOM05D006042 ORTHO05D007658 1.8e-90 336.7 281 64.1
SalBow3G3727 Salvia bowleyana HOM05D006042 ORTHO05D007658 1.8e-90 336.7 281 64.1
ATR0589G121 Amborella trichopoda HOM05D006042 ORTHO05D007658 5.2e-90 335.1 199 82.9
FAN05G0122 Fragaria x ananassa HOM05D006042 ORTHO05D007658 8.9e-90 334.3 283 64.0
Zm00001eb042940 Zea mays HOM05D006042 ORTHO05D007658 1.2e-89 334.0 236 72.0
Os08g0359000 Oryza sativa ssp. japonica HOM05D006042 ORTHO05D007658 4.4e-89 332.0 194 82.0
RcHm_v2.0_Chr2g0163121 Rosa chinensis HOM05D006042 ORTHO05D007658 5.7e-89 331.6 287 62.4
Rhsim08G0079500 Rhododendron simsii HOM05D006042 ORTHO05D007658 1.3e-88 330.5 310 61.3
Sc10g0001330 Simmondsia chinensis HOM05D006042 ORTHO05D007658 3.7e-88 328.9 269 62.5
COL.COLO4_16190 Corchorus olitorius HOM05D002377 ORTHO05D007658 8.3e-88 327.8 208 78.8
AT5G38660 Arabidopsis thaliana HOM05D006042 ORTHO05D007658 2.4e-87 326.2 206 79.1
arahy.Tifrunner.gnm1.ann1.4I03R9 Arachis hypogaea HOM05D006042 ORTHO05D007658 3.1e-87 325.9 278 64.4
Hund16127 Selenicereus undatus HOM05D006042 ORTHO05D007658 7.0e-87 324.7 217 73.3
AUR62014538 Chenopodium quinoa HOM05D006042 ORTHO05D007658 9.2e-87 324.3 183 84.2
AUR62008965 Chenopodium quinoa HOM05D006042 ORTHO05D007658 2.3e-85 319.7 184 82.1
Sed0018352 Sechium edule HOM05D006042 ORTHO05D007658 1.1e-84 317.4 211 76.3
FAN02G0945 Fragaria x ananassa HOM05D006042 ORTHO05D007658 9.5e-84 314.3 283 62.2
vmacro18106 Vaccinium macrocarpon HOM05D006042 ORTHO05D007658 2.8e-83 312.8 170 89.4
Lj2C447G3 Lonicera japonica HOM05D006042 ORTHO05D007658 8.0e-83 311.2 173 88.4
HPP92_008047 Vanilla planifolia HOM05D006042 ORTHO05D007658 3.4e-81 305.8 217 69.6
SEGI_07967 Sequoiadendron giganteum HOM05D006042 ORTHO05D007658 1.4e-79 300.4 191 75.9
Aa31LG9G16960 Aethionema arabicum HOM05D006042 ORTHO05D007658 4.1e-79 298.9 171 84.2
Sabra04G0078300 Salix brachista HOM05D006042 ORTHO05D007658 1.3e-77 293.9 316 55.4
Mapoly0019s0052 Marchantia polymorpha HOM05D006042 ORTHO05D007658 1.7e-77 293.5 219 65.3
SGA_v2.0_scaffold49G18090 Striga asiatica HOM05D006042 ORTHO05D007658 5.0e-77 292.0 163 86.5
Pp3c4_3720 Physcomitrium patens HOM05D006042 ORTHO05D007658 2.8e-75 286.2 199 72.4
EL10Ac2g04605 Beta vulgaris HOM05D006042 ORTHO05D007658 1.1e-74 284.3 196 70.9
CDE09G0042 Ceratophyllum demersum HOM05D006042 ORTHO05D007658 6.8e-74 281.6 276 60.1
SMO232G0004 Selaginella moellendorffii HOM05D006042 ORTHO05D007658 1.2e-73 280.8 205 68.3
AagrBONN_evm.TU.Sc2ySwM_340.223 Anthoceros agrestis HOM05D000513 ORTHO05D003825 1.5e-73 280.4 192 70.8
Nn3g17761 Nelumbo nucifera HOM05D006042 ORTHO05D007658 1.2e-70 270.8 240 62.1
CBR_g44937 Chara braunii HOM05D006042 ORTHO05D007658 5.0e-69 265.4 198 62.1
Dinv34847 Davidia involucrata HOM05D006042 ORTHO05D007658 2.5e-68 263.1 222 63.5
Hma1.2p1_0550F.1_g177260 Hydrangea macrophylla HOM05D006042 ORTHO05D007658 4.3e-68 262.3 165 80.0
Cpa.g.sc179.22 Carica papaya HOM05D006042 ORTHO05D007658 1.9e-55 220.3 271 50.9
MELO3C022088.2 Cucumis melo HOM05D006042 ORTHO05D007658 2.7e-54 216.5 209 59.3
Peaxi162Scf00751g00624 Petunia axillaris HOM05D006042 ORTHO05D007658 5.6e-52 208.8 121 81.0
MBI09_g40289_MAGBIO Magnolia biondii HOM05D006042 ORTHO05D007658 7.6e-49 198.4 110 86.4
BcaC02g09662 Brassica carinata HOM05D006042 ORTHO05D007658 2.4e-47 193.4 242 50.4
PRCOL_00000779 Prasinoderma coloniale HOM05D006042 ORTHO05D007658 3.2e-47 193.0 192 51.6
MCO16G088 Micromonas commoda HOM05D006042 ORTHO05D007658 9.6e-44 181.4 194 46.9
Cre16.g665250 Chlamydomonas reinhardtii HOM05D006042 ORTHO05D007658 2.8e-43 179.9 186 51.6
GSVIVG01026074001 Vitis vinifera HOM05D006042 ORTHO05D007658 4.0e-42 176.0 121 75.2
BolC3t18613H Brassica oleracea HOM05D006042 ORTHO05D032368 3.4e-41 172.9 97 85.6
BolC5t30891H Brassica oleracea HOM05D006042 ORTHO05D007658 2.2e-40 170.2 97 84.5
TAR278G0002 Trochodendron aralioides HOM05D006042 ORTHO05D007658 3.8e-40 169.5 119 73.1
C04p45290 Brassica napus HOM05D006042 ORTHO05D007658 2.8e-35 153.3 296 38.9
unitig_0.g9 Utricularia gibba HOM05D006042 ORTHO05D007658 3.8e-32 142.9 80 82.5
Haze_14131 Corylus avellana HOM05D006042 ORTHO05D007658 4.9e-32 142.5 179 52.5
BolC4t26112H Brassica oleracea HOM05D006042 ORTHO05D007658 1.4e-31 141.0 206 44.7
Cpa.g.sc179.23 Carica papaya HOM05D006042 ORTHO05D007658 1.2e-30 137.9 86 76.7
Haze_14130 Corylus avellana HOM05D006042 ORTHO05D007658 3.5e-30 136.3 78 84.6
GSVIVG01027526001 Vitis vinifera HOM05D006042 ORTHO05D007658 1.9e-28 130.6 78 82.1
QL02p057613 Quercus lobata HOM05D006042 ORTHO05D007658 6.7e-21 105.5 70 71.4
CARHR262580 Cardamine hirsuta HOM05D006042 ORTHO05D007658 4.8e-19 99.4 144 49.3
Sabra17G0093400 Salix brachista HOM05D006042 ORTHO05D007658 1.8e-18 97.4 79 68.4
Ah.16g101960 Amaranthus hybridus HOM05D000095 ORTHO05D000330 5.9e-17 92.4 57 77.2
BcaC05g29172 Brassica carinata HOM05D006042 ORTHO05D032368 3.8e-16 89.7 50 84.0
C02p54890 Brassica napus HOM05D006042 ORTHO05D032368 5.0e-16 89.4 51 82.4
Phvul.004G063400 Phaseolus vulgaris HOM05D002377 ORTHO05D002656 8.8e-13 78.6 55 69.1
Peaxi162Scf00104g00074 Petunia axillaris HOM05D006042 ORTHO05D007658 1.1e-12 78.2 48 72.9
Phvul.004G063200 Phaseolus vulgaris HOM05D002377 ORTHO05D002656 9.7e-12 75.1 47 74.5
VMungo0464G0819 Vigna mungo HOM05D006042 ORTHO05D007658 1.7e-08 64.3 47 66.0
unitig_0.g10 Utricularia gibba HOM05D006042 ORTHO05D007658 3.8e-08 63.2 76 50.0
Cpa.g.sc179.24 Carica papaya HOM05D006042 ORTHO05D007658 3.6e-06 56.6 38 71.1


User provided reference genes

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