Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_29963_v3 Cicer arietinum L. HOM05D008692 ORTHO05D015071 1.2e-192 676.4 369 100.0
Ca_06382_v3 Cicer arietinum L. HOM05D008692 ORTHO05D011196 2.2e-189 665.6 363 100.0
Psat2g009200 Pisum sativum HOM05D008692 ORTHO05D015071 2.3e-58 230.3 360 44.4
Medtr5g094950 Medicago truncatula HOM05D008692 ORTHO05D015071 7.6e-57 225.3 416 41.6
Medtr5g094960 Medicago truncatula HOM05D008692 ORTHO05D015071 7.6e-57 225.3 373 41.8
Medtr5g094990 Medicago truncatula HOM05D008692 ORTHO05D015071 3.2e-55 219.9 373 41.8
Medtr5g094850 Medicago truncatula HOM05D008692 ORTHO05D015071 4.7e-51 206.1 382 40.1
TPR.G14142 Trifolium pratense HOM05D008692 ORTHO05D015071 1.0e-45 188.3 395 38.5
TPR.G14149 Trifolium pratense HOM05D008692 ORTHO05D011196 1.8e-42 177.6 456 33.8
VMungo0647G0384 Vigna mungo HOM05D008692 ORTHO05D011196 1.5e-41 174.5 340 40.6
Phvul.008G167500 Phaseolus vulgaris HOM05D008692 ORTHO05D011196 4.4e-41 172.9 317 41.6
LjContig00081g0012246 Lotus japonicus HOM05D008692 ORTHO05D011196 1.7e-40 171.0 360 37.2
Glyma.14G015200 Glycine max HOM05D008692 ORTHO05D011196 2.2e-40 170.6 321 38.6
VMungo0647G0491 Vigna mungo HOM05D009155 ORTHO05D004853 4.2e-39 166.4 299 41.5
VMungo0647G1248 Vigna mungo HOM05D008692 ORTHO05D011196 3.9e-37 159.8 297 40.1
Medtr5g094920 Medicago truncatula HOM05D008692 ORTHO05D015071 4.3e-36 156.4 432 33.3
VMungo0647G1494 Vigna mungo HOM05D008692 ORTHO05D011196 7.3e-36 155.6 340 37.4
TPR.G14169 Trifolium pratense HOM05D008692 ORTHO05D015071 8.1e-35 152.1 456 33.6
TPR.G8598 Trifolium pratense HOM05D005718 ORTHO05D004853 2.4e-34 150.6 232 46.1
Psat2g008360 Pisum sativum HOM05D008692 ORTHO05D011196 5.3e-34 149.4 176 52.8
Psat2g008400 Pisum sativum HOM05D008692 ORTHO05D011196 1.2e-33 148.3 195 46.2
Medtr5g095370 Medicago truncatula HOM05D008692 ORTHO05D011196 3.4e-33 146.7 235 43.8
Medtr5g095050 Medicago truncatula HOM05D008692 ORTHO05D011196 1.7e-32 144.4 412 34.5
TPR.G8609 Trifolium pratense HOM05D005718 ORTHO05D004853 2.2e-32 144.1 184 50.5
Medtr5g094970 Medicago truncatula HOM05D008692 ORTHO05D011196 4.9e-32 142.9 290 40.7
Medtr5g095390 Medicago truncatula HOM05D008692 ORTHO05D015071 4.9e-32 142.9 305 38.4
Lalb_Chr17g0348841 Lupinus albus HOM05D008692 ORTHO05D011196 2.4e-31 140.6 271 36.2
TPR.G8591 Trifolium pratense HOM05D005718 ORTHO05D004853 1.6e-30 137.9 186 50.5
Medtr5g095400 Medicago truncatula HOM05D005718 ORTHO05D004853 2.3e-29 134.0 216 42.6
VMungo0647G1912 Vigna mungo HOM05D008692 ORTHO05D011196 2.3e-29 134.0 202 44.6
Medtr5g095430 Medicago truncatula HOM05D005718 ORTHO05D004853 3.9e-29 133.3 206 43.7
VMungo0647G2344 Vigna mungo HOM05D000176 ORTHO05D000106 7.4e-28 129.0 211 42.2
Phvul.008G277142 Phaseolus vulgaris HOM05D008692 ORTHO05D011196 2.8e-27 127.1 129 55.8
Medtr5g095310 Medicago truncatula HOM05D005718 ORTHO05D004853 1.1e-26 125.2 150 51.3
TPR.G25325 Trifolium pratense HOM05D008692 ORTHO05D015071 2.4e-26 124.0 183 44.8
Psat7g256720 Pisum sativum HOM05D008692 ORTHO05D011196 1.0e-24 118.6 163 50.3
Medtr5g094910 Medicago truncatula HOM05D008692 ORTHO05D015071 8.4e-24 115.5 325 34.5
arahy.Tifrunner.gnm1.ann1.JWE1IW Arachis hypogaea HOM05D017804 ORTHO05D011196 7.1e-23 112.5 236 38.1
LjContig00081g0017189 Lotus japonicus HOM05D008692 ORTHO05D011196 3.9e-21 106.7 234 38.0
VMungo0647G1212 Vigna mungo HOM05D008692 ORTHO05D011196 2.5e-20 104.0 278 32.0
Medtr1g071620 Medicago truncatula HOM05D008692 ORTHO05D011196 4.3e-20 103.2 224 38.4
TPR.G14147 Trifolium pratense HOM05D008692 ORTHO05D011196 5.7e-20 102.8 300 32.7
LjContig00081g0016484 Lotus japonicus HOM05D008692 ORTHO05D011196 9.6e-20 102.1 339 35.1
TPR.G8600 Trifolium pratense HOM05D005718 ORTHO05D004853 1.6e-19 101.3 119 52.9
Medtr5g095360 Medicago truncatula HOM05D008692 ORTHO05D011196 1.8e-18 97.8 87 65.5
Phvul.008G277400 Phaseolus vulgaris HOM05D008692 ORTHO05D011196 3.1e-18 97.1 360 32.5
Lj1g0006584 Lotus japonicus HOM05D008692 ORTHO05D011196 1.5e-17 94.7 159 39.0
Medtr5g077500 Medicago truncatula HOM05D008692 ORTHO05D262651 4.5e-17 93.2 142 45.1
arahy.Tifrunner.gnm1.ann1.1YX8TX Arachis hypogaea HOM05D008692 ORTHO05D011196 5.0e-16 89.7 197 36.5
arahy.Tifrunner.gnm1.ann1.R1C8VV Arachis hypogaea HOM05D008692 ORTHO05D011196 2.7e-14 84.0 237 34.6
arahy.Tifrunner.gnm1.ann1.M4F06K Arachis hypogaea HOM05D017804 ORTHO05D011196 3.9e-13 80.1 279 32.6
TPR.G25324 Trifolium pratense HOM05D000445 ORTHO05D015071 1.5e-12 78.2 150 39.3
Medtr5g034000 Medicago truncatula HOM05D008692 ORTHO05D011196 1.4e-07 61.6 64 53.1
Haze_08671 Corylus avellana HOM05D002584 ORTHO05D002736 2.5e-07 60.8 131 35.1
Cfa012844 Carpinus fangiana HOM05D002584 ORTHO05D002736 3.2e-07 60.5 127 34.6
Thecc.03G292900 Theobroma cacao HOM05D011767 ORTHO05D013559 3.2e-07 60.5 147 34.0
arahy.Tifrunner.gnm1.ann1.Q11YMN Arachis hypogaea HOM05D017804 ORTHO05D011196 9.4e-07 58.9 140 36.4
arahy.Tifrunner.gnm1.ann1.Z8BAYI Arachis hypogaea HOM05D017804 ORTHO05D011196 7.9e-06 55.8 134 36.6


User provided reference genes

Program Settings