Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00097_v3 Cicer arietinum L. HOM05D005305 ORTHO05D006394 2.5e-198 695.3 352 100.0
Ca_29935_v3 Cicer arietinum L. HOM05D005305 ORTHO05D006394 2.5e-198 695.3 352 100.0
Medtr2g007870 Medicago truncatula HOM05D005305 ORTHO05D006394 5.1e-119 431.8 362 69.6
Psat1g219600 Pisum sativum HOM05D005305 ORTHO05D006394 2.2e-114 416.4 358 65.9
TPR.G19715 Trifolium pratense HOM05D005305 ORTHO05D006394 1.3e-109 400.6 359 64.1
Glyma.08G183700 Glycine max HOM05D005305 ORTHO05D006394 6.7e-71 271.9 341 52.5
Lj6g0020123 Lotus japonicus HOM05D005305 ORTHO05D006394 1.7e-69 267.3 350 51.1
arahy.Tifrunner.gnm1.ann1.I1A2NR Arachis hypogaea HOM05D005305 ORTHO05D006394 1.4e-65 254.2 392 44.1
arahy.Tifrunner.gnm1.ann1.ZL3PAB Arachis hypogaea HOM05D005305 ORTHO05D006394 2.7e-64 250.0 393 43.5
VMungo0540G1828 Vigna mungo HOM05D005305 ORTHO05D006394 3.0e-63 246.5 347 47.3
Phvul.006G211300 Phaseolus vulgaris HOM05D005305 ORTHO05D006394 7.7e-59 231.9 339 46.3
Lalb_Chr15g0090581 Lupinus albus HOM05D005305 ORTHO05D006394 3.6e-56 223.0 350 44.6
ClCG09G014160 Citrullus lanatus HOM05D005305 ORTHO05D006394 5.2e-39 166.0 333 38.4
CiPaw.05G041500 Carya illinoinensis HOM05D005305 ORTHO05D006394 3.4e-38 163.3 229 49.3
Sed0001621 Sechium edule HOM05D005305 ORTHO05D006394 1.7e-37 161.0 261 44.8
CSS0043111 Camellia sinensis var. sinensis HOM05D005305 ORTHO05D006394 6.3e-37 159.1 266 42.1
CsaV3_6G037300 Cucumis sativus L. HOM05D005305 ORTHO05D006394 3.5e-35 153.3 275 40.4
Sed0003606 Sechium edule HOM05D005305 ORTHO05D006394 3.5e-35 153.3 173 53.2
MD15G1420000 Malus domestica HOM05D005305 ORTHO05D006394 4.5e-35 152.9 302 40.7
Prupe.1G566000 Prunus persica HOM05D005305 ORTHO05D006394 7.7e-35 152.1 194 50.5
MELO3C014385.2 Cucumis melo HOM05D005305 ORTHO05D006394 1.0e-34 151.8 306 39.2
Oeu000200.2 Olea europaea HOM05D005305 ORTHO05D006394 1.5e-33 147.9 321 38.0
HanXRQChr11g0337491 Helianthus annuus HOM05D005305 ORTHO05D006394 7.3e-33 145.6 177 50.3
Actinidia33832 Actinidia chinensis HOM05D005305 ORTHO05D006394 1.6e-32 144.4 289 38.8
Aqoxy6G00392 Aquilegia oxysepala HOM05D005305 ORTHO05D006394 2.1e-32 144.1 300 37.7
Dinv19341 Davidia involucrata HOM05D005305 ORTHO05D006394 2.8e-32 143.7 332 36.7
FAN08G2621 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.8e-31 141.0 295 35.6
Lsat_1_v5_gn_5_107520 Lactuca sativa HOM05D005305 ORTHO05D006394 3.0e-31 140.2 295 39.3
Lj1C922T21 Lonicera japonica HOM05D005305 ORTHO05D006394 4.0e-31 139.8 263 37.3
FAN13G2550 Fragaria x ananassa HOM05D005305 ORTHO05D006394 5.2e-31 139.4 165 50.9
QL11p019060 Quercus lobata HOM05D005305 ORTHO05D006394 5.2e-31 139.4 208 44.7
ECA236G3147 Erigeron canadensis HOM05D005305 ORTHO05D006394 6.8e-31 139.0 170 49.4
MBI17_g24510_MAGBIO Magnolia biondii HOM05D005305 ORTHO05D006394 5.7e-30 136.0 250 40.0
FAN04G1743 Fragaria x ananassa HOM05D005305 ORTHO05D006394 9.8e-30 135.2 286 36.7
FvH4_5g29740 Fragaria vesca HOM05D005305 ORTHO05D006394 3.7e-29 133.3 310 35.8
Lsat_1_v5_gn_7_79481 Lactuca sativa HOM05D005305 ORTHO05D006394 3.7e-29 133.3 203 42.4
RcHm_v2.0_Chr7g0223251 Rosa chinensis HOM05D005305 ORTHO05D006394 1.4e-28 131.3 327 33.6
HanXRQChr10g0300271 Helianthus annuus HOM05D005305 ORTHO05D006394 1.8e-28 131.0 168 45.8
BcaB02g06584 Brassica carinata HOM05D005305 ORTHO05D006394 9.2e-28 128.6 225 40.0
A08p31700 Brassica napus HOM05D005305 ORTHO05D006394 9.2e-28 128.6 179 43.0
Atru.chr6.974 Acer truncatum HOM05D005305 ORTHO05D006394 1.2e-27 128.3 208 40.4
AL1G27270 Arabidopsis lyrata HOM05D005305 ORTHO05D006394 1.6e-27 127.9 178 46.1
BraA08t35092Z Brassica rapa HOM05D005305 ORTHO05D006394 1.6e-27 127.9 180 42.8
BcaC05g25447 Brassica carinata HOM05D005305 ORTHO05D006394 4.6e-27 126.3 164 45.7
C05p13290 Brassica napus HOM05D005305 ORTHO05D006394 4.6e-27 126.3 164 45.7
BolC5t30066H Brassica oleracea HOM05D005305 ORTHO05D006394 4.6e-27 126.3 224 38.8
A06p11170 Brassica napus HOM05D005305 ORTHO05D006394 5.9e-27 125.9 224 38.8
BraA06t24297Z Brassica rapa HOM05D005305 ORTHO05D006394 5.9e-27 125.9 166 44.0
Carub.0001s1494 Capsella rubella HOM05D005305 ORTHO05D006394 7.8e-27 125.6 178 46.1
AT1G15190 Arabidopsis thaliana HOM05D005305 ORTHO05D006394 1.0e-26 125.2 178 46.1
Ciclev10001162m.g Citrus clementina HOM05D005305 ORTHO05D006394 1.0e-26 125.2 268 38.4
Sp1g13500 Schrenkiella parvula HOM05D005305 ORTHO05D006394 1.0e-26 125.2 169 46.7
Thhalv10009974m.g Eutrema salsugineum HOM05D005305 ORTHO05D006394 1.3e-26 124.8 187 43.3
BcaB03g13072 Brassica carinata HOM05D005305 ORTHO05D006394 5.0e-26 122.9 171 44.4
BcaC07g38772 Brassica carinata HOM05D005305 ORTHO05D006394 8.6e-26 122.1 167 44.3
C08p17050 Brassica napus HOM05D005305 ORTHO05D006394 8.6e-26 122.1 167 44.3
BolC8t49330H Brassica oleracea HOM05D005305 ORTHO05D006394 8.6e-26 122.1 167 44.3
CARHR015700 Cardamine hirsuta HOM05D005305 ORTHO05D006394 1.1e-25 121.7 168 44.6
MBI17_g24663_MAGBIO Magnolia biondii HOM05D005305 ORTHO05D006394 1.9e-25 120.9 250 38.4
Sp2g12560 Schrenkiella parvula HOM05D005305 ORTHO05D006394 2.5e-25 120.6 183 42.1
Aa31LG2G8790 Aethionema arabicum HOM05D005305 ORTHO05D006394 9.5e-25 118.6 188 41.0
FAN22G2313 Fragaria x ananassa HOM05D005305 ORTHO05D006394 3.6e-24 116.7 173 42.2
Nn5g28774 Nelumbo nucifera HOM05D005305 ORTHO05D006394 3.6e-24 116.7 214 38.8
A02p31660 Brassica napus HOM05D005305 ORTHO05D006394 4.7e-24 116.3 168 42.9
BolC2t10994H Brassica oleracea HOM05D005305 ORTHO05D006394 6.2e-24 115.9 146 43.8
HanXRQChr10g0294801 Helianthus annuus HOM05D005305 ORTHO05D006394 3.1e-23 113.6 242 37.6
TAR624G0561 Trochodendron aralioides HOM05D005305 ORTHO05D006394 3.1e-23 113.6 165 42.4
FvH4_2g02450 Fragaria vesca HOM05D005305 ORTHO05D006394 8.9e-23 112.1 176 42.6
FAN15G2678 Fragaria x ananassa HOM05D005305 ORTHO05D006394 5.8e-22 109.4 174 40.8
SalBow5G2993 Salvia bowleyana HOM05D005305 ORTHO05D006394 7.5e-22 109.0 176 42.0
Duzib187G0918 Durio zibethinus HOM05D005305 ORTHO05D006394 1.7e-21 107.8 177 42.4
Oeu035198.1 Olea europaea HOM05D005305 ORTHO05D006394 1.7e-21 107.8 219 38.4
Gohir.D12G092500 Gossypium hirsutum HOM05D005305 ORTHO05D006394 2.9e-21 107.1 175 41.7
Gorai.008G100000 Gossypium raimondii HOM05D005305 ORTHO05D006394 2.9e-21 107.1 175 41.7
PGSC0003DMG400035592 Solanum tuberosum HOM05D005305 ORTHO05D006394 8.3e-21 105.5 163 44.8
PGR042G0513 Punica granatum HOM05D005305 ORTHO05D006394 1.9e-20 104.4 251 35.9
FvH4_2g02380 Fragaria vesca HOM05D005305 ORTHO05D006394 2.4e-20 104.0 176 40.9
TWI31G0537 Tripterygium wilfordii HOM05D005305 ORTHO05D006394 4.1e-20 103.2 174 42.0
Solyc11g005490.1 Solanum lycopersicum HOM05D005305 ORTHO05D006394 5.4e-20 102.8 164 43.3
Sopen11g001490 Solanum pennellii HOM05D005305 ORTHO05D006394 5.4e-20 102.8 164 43.3
Nn1g06067 Nelumbo nucifera HOM05D005305 ORTHO05D006394 7.0e-20 102.4 262 34.7
ECA234G0387 Erigeron canadensis HOM05D005305 ORTHO05D006394 9.2e-20 102.1 191 39.3
Gohir.A11G210433 Gossypium hirsutum HOM05D005305 ORTHO05D006394 2.7e-19 100.5 222 34.7
Manes.13G081800 Manihot esculenta HOM05D005305 ORTHO05D006394 2.7e-19 100.5 162 38.3
Migut.L00049 Erythranthe guttata HOM05D005305 ORTHO05D006394 6.0e-19 99.4 158 42.4
CAN.G516.6 Capsicum annuum HOM05D005305 ORTHO05D006394 7.8e-19 99.0 163 43.6
TWI79G0764 Tripterygium wilfordii HOM05D005305 ORTHO05D006394 7.8e-19 99.0 148 45.3
BraA02t08169Z Brassica rapa HOM05D005305 ORTHO05D006394 1.7e-18 97.8 147 39.5
Potri.001G306800 Populus trichocarpa HOM05D005305 ORTHO05D006394 1.7e-18 97.8 168 38.1
Potri.019G002300 Populus trichocarpa HOM05D005305 ORTHO05D006394 1.7e-18 97.8 168 39.9
SGA_v2.0_scaffold47G17682 Striga asiatica HOM05D005305 ORTHO05D006394 1.7e-18 97.8 236 36.9
FAN02G4273 Fragaria x ananassa HOM05D005305 ORTHO05D006394 2.3e-18 97.4 100 54.0
Nitab4.5_0002138g0070 Nicotiana tabacum HOM05D005305 ORTHO05D006394 3.0e-18 97.1 151 42.4
Nitab4.5_0001582g0090 Nicotiana tabacum HOM05D005305 ORTHO05D006394 5.0e-18 96.3 151 42.4
Ah.03g133360 Amaranthus hybridus HOM05D005305 ORTHO05D006394 1.1e-17 95.1 143 40.6
Cpa.g.sc72.34 Carica papaya HOM05D005305 ORTHO05D006394 1.9e-17 94.4 169 40.8
COL.COLO4_22382 Corchorus olitorius HOM05D005305 ORTHO05D006394 1.9e-17 94.4 153 41.8
Sabra19G0004600 Salix brachista HOM05D005305 ORTHO05D006394 2.5e-17 94.0 189 37.6
AUR62024239 Chenopodium quinoa HOM05D005305 ORTHO05D006394 3.3e-17 93.6 257 33.5
FAN02G0608 Fragaria x ananassa HOM05D005305 ORTHO05D006394 3.3e-17 93.6 100 53.0
Manes.12G149900 Manihot esculenta HOM05D005305 ORTHO05D006394 3.3e-17 93.6 250 33.2
DCAR_001409 Daucus carota HOM05D005305 ORTHO05D006394 4.3e-17 93.2 191 37.7
unitig_32.g10686 Utricularia gibba HOM05D005305 ORTHO05D006394 4.3e-17 93.2 150 40.7
Thecc.01G118700 Theobroma cacao HOM05D005305 ORTHO05D006394 5.6e-17 92.8 176 39.2
AUR62005501 Chenopodium quinoa HOM05D005305 ORTHO05D006394 1.2e-16 91.7 249 32.5
PSO730G0002 Papaver somniferum HOM05D005305 ORTHO05D006394 3.6e-16 90.1 190 33.2
FvH4_4g13350 Fragaria vesca HOM05D005305 ORTHO05D006394 1.1e-15 88.6 142 42.3
FAN12G2268 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.4e-15 88.2 110 48.2
FvH4_4g36540 Fragaria vesca HOM05D005305 ORTHO05D006394 1.8e-15 87.8 110 48.2
Atru.chr4.616 Acer truncatum HOM05D005305 ORTHO05D006394 2.3e-15 87.4 175 37.7
FAN05G3957 Fragaria x ananassa HOM05D005305 ORTHO05D006394 2.3e-15 87.4 100 51.0
Sc04g0009640 Simmondsia chinensis HOM05D005305 ORTHO05D006394 2.3e-15 87.4 311 31.5
FvH4_2g04910 Fragaria vesca HOM05D005305 ORTHO05D006394 5.2e-15 86.3 158 38.0
Dinv02718 Davidia involucrata HOM05D005305 ORTHO05D006394 6.8e-15 85.9 137 40.1
FAN20G0407 Fragaria x ananassa HOM05D005305 ORTHO05D006394 2.0e-14 84.3 184 34.2
FAN20G1442 Fragaria x ananassa HOM05D005305 ORTHO05D006394 2.0e-14 84.3 184 34.2
FAN20G2254 Fragaria x ananassa HOM05D005305 ORTHO05D006394 2.0e-14 84.3 184 34.2
FAN20G2361 Fragaria x ananassa HOM05D005305 ORTHO05D006394 2.0e-14 84.3 184 34.2
FAN02G3216 Fragaria x ananassa HOM05D005305 ORTHO05D006394 2.6e-14 84.0 168 37.5
FAN24G2323 Fragaria x ananassa HOM05D005305 ORTHO05D006394 2.4e-12 77.4 184 32.6
C02p49000 Brassica napus HOM05D005305 ORTHO05D006394 4.1e-12 76.6 114 41.2
ATR0311G001 Amborella trichopoda HOM05D005305 ORTHO05D006394 1.6e-11 74.7 184 32.6
FAN22G1821 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.3e-10 71.6 80 50.0
ECA248G2956 Erigeron canadensis HOM05D005305 ORTHO05D006394 1.5e-09 68.2 122 38.5
AUR62008091 Chenopodium quinoa HOM05D005423 ORTHO05D006223 7.3e-09 65.9 109 36.7
AUR62028667 Chenopodium quinoa HOM05D005423 ORTHO05D006223 1.6e-08 64.7 97 39.2
EL10Ac5g10610 Beta vulgaris HOM05D005423 ORTHO05D006223 2.8e-08 63.9 176 33.5
AUR62008092 Chenopodium quinoa HOM05D005423 ORTHO05D006223 2.8e-08 63.9 109 35.8
AUR62028668 Chenopodium quinoa HOM05D005423 ORTHO05D006223 2.8e-08 63.9 97 38.1
EL10Ac5g10640 Beta vulgaris HOM05D005423 ORTHO05D006223 3.6e-08 63.5 102 39.2
EL10Ac5g10674 Beta vulgaris HOM05D005423 ORTHO05D006223 4.7e-08 63.2 125 36.0
TAR381G1643 Trochodendron aralioides HOM05D005305 ORTHO05D006394 1.4e-07 61.6 91 41.8
Thecc.02G278300 Theobroma cacao HOM05D002727 ORTHO05D002856 2.3e-07 60.8 159 30.8
ClCG01G006130 Citrullus lanatus HOM05D002727 ORTHO05D002856 4.0e-07 60.1 147 27.9
Oeu044348.1 Olea europaea HOM05D002727 ORTHO05D002856 8.9e-07 58.9 133 29.3
Carub.0001s2910 Capsella rubella HOM05D005423 ORTHO05D006223 1.2e-06 58.5 164 31.1
FAN11G0652 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.2e-06 58.5 106 35.8
Lalb_Chr11g0073251 Lupinus albus HOM05D005423 ORTHO05D006223 1.2e-06 58.5 88 38.6
COL.COLO4_20450 Corchorus olitorius HOM05D002727 ORTHO05D002856 1.5e-06 58.2 137 30.7
Sed0009741 Sechium edule HOM05D007205 ORTHO05D009175 1.5e-06 58.2 99 35.4
SEGI_15553 Sequoiadendron giganteum HOM05D007205 ORTHO05D009175 2.0e-06 57.8 136 30.9
FvH4_3g08610 Fragaria vesca HOM05D005305 ORTHO05D006394 2.6e-06 57.4 116 35.3
DCAR_019203 Daucus carota HOM05D007205 ORTHO05D009175 4.4e-06 56.6 152 28.9
FAN20G2269 Fragaria x ananassa HOM05D005305 ORTHO05D006394 4.4e-06 56.6 46 63.0
Sabra16G0298100 Salix brachista HOM05D005423 ORTHO05D006223 5.8e-06 56.2 104 33.7
TAR622G1289 Trochodendron aralioides HOM05D002727 ORTHO05D002856 5.8e-06 56.2 135 31.1
Ca_11101_v3 Cicer arietinum L. HOM05D002727 ORTHO05D002856 7.6e-06 55.8 147 28.6
FAN27G2751 Fragaria x ananassa HOM05D002727 ORTHO05D002856 7.6e-06 55.8 129 33.3
Hma1.2p1_0410F.1_g147050 Hydrangea macrophylla HOM05D005423 ORTHO05D006223 7.6e-06 55.8 134 32.1
FAN15G1981 Fragaria x ananassa HOM05D002727 ORTHO05D002856 9.9e-06 55.5 129 33.3
Potri.001G440800 Populus trichocarpa HOM05D005423 ORTHO05D006223 9.9e-06 55.5 172 27.3


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