Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_29897_v3 Cicer arietinum L. HOM05D006083 ORTHO05D007634 1.5e-83 312.8 154 100.0
Ca_07226_v3 Cicer arietinum L. HOM05D006083 ORTHO05D007634 1.6e-69 266.2 147 91.8
Ca_07227_v3 Cicer arietinum L. HOM05D006083 ORTHO05D007634 1.4e-57 226.5 113 95.6
Ca_29789_v3 Cicer arietinum L. HOM05D006083 ORTHO05D007634 4.1e-57 224.9 107 100.0
TPR.G15506 Trifolium pratense HOM05D006083 ORTHO05D007634 6.4e-50 201.1 113 85.8
Medtr7g024000 Medicago truncatula HOM05D006083 ORTHO05D007634 3.5e-48 195.3 113 83.2
Psat3g185080 Pisum sativum HOM05D006083 ORTHO05D007634 1.3e-47 193.4 113 83.2
Lj1g0008101 Lotus japonicus HOM05D006083 ORTHO05D007634 2.7e-40 169.1 114 72.8
VMungo1383G1537 Vigna mungo HOM05D006083 ORTHO05D007634 2.3e-36 156.0 124 62.9
Phvul.008G013732 Phaseolus vulgaris HOM05D006083 ORTHO05D007634 9.9e-35 150.6 115 65.2
arahy.Tifrunner.gnm1.ann1.ES2X5Y Arachis hypogaea HOM05D006083 ORTHO05D007634 5.4e-33 144.8 111 64.9
arahy.Tifrunner.gnm1.ann1.V7LDKI Arachis hypogaea HOM05D006083 ORTHO05D007634 5.4e-33 144.8 111 64.9
Glyma.18G288300 Glycine max HOM05D006083 ORTHO05D007634 6.0e-32 141.4 111 65.8
Lalb_Chr04g0257841 Lupinus albus HOM05D006083 ORTHO05D007634 7.8e-32 141.0 114 63.2
Lalb_Chr10g0091771 Lupinus albus HOM05D006083 ORTHO05D007634 2.4e-25 119.4 109 58.7
CiPaw.01G284100 Carya illinoinensis HOM05D006083 ORTHO05D007634 4.6e-16 88.6 113 42.5
Manes.07G113300 Manihot esculenta HOM05D006083 ORTHO05D007634 3.9e-15 85.5 120 42.5
Cfa001507 Carpinus fangiana HOM05D006083 ORTHO05D007634 4.3e-14 82.0 112 43.8
COL.COLO4_14970 Corchorus olitorius HOM05D006083 ORTHO05D007634 7.3e-14 81.3 113 42.5
Haze_17036 Corylus avellana HOM05D006083 ORTHO05D007634 1.3e-13 80.5 112 42.9
Thecc.10G046700 Theobroma cacao HOM05D006083 ORTHO05D007634 1.3e-13 80.5 99 44.4
QL08p059019 Quercus lobata HOM05D006083 ORTHO05D007634 1.6e-13 80.1 111 44.1
Gohir.A05G349900 Gossypium hirsutum HOM05D006083 ORTHO05D007634 2.1e-13 79.7 113 43.4
Duzib114G0803 Durio zibethinus HOM05D006083 ORTHO05D007634 2.8e-13 79.3 113 42.5
Gohir.D04G062600 Gossypium hirsutum HOM05D006083 ORTHO05D007634 6.2e-13 78.2 113 43.4
Gorai.012G069900 Gossypium raimondii HOM05D006083 ORTHO05D007634 6.2e-13 78.2 113 43.4
MELO3C025449.2 Cucumis melo HOM05D006083 ORTHO05D007634 1.2e-11 73.9 95 42.1
Potri.008G052500 Populus trichocarpa HOM05D006083 ORTHO05D007634 1.2e-11 73.9 106 41.5
Sabra08G0037800 Salix brachista HOM05D006083 ORTHO05D007634 3.4e-11 72.4 108 40.7
TWI15G0674 Tripterygium wilfordii HOM05D006083 ORTHO05D007634 1.3e-10 70.5 113 38.1
Atru.chr12.505 Acer truncatum HOM05D006083 ORTHO05D007634 3.8e-10 68.9 116 37.9
CsaV3_5G026410 Cucumis sativus L. HOM05D006083 ORTHO05D007634 4.9e-10 68.6 95 41.1
Sed0020975 Sechium edule HOM05D006083 ORTHO05D007634 8.4e-10 67.8 84 41.7
Sopen04g005570 Solanum pennellii HOM05D006083 ORTHO05D007634 8.4e-10 67.8 111 39.6
Solyc04g011380.4 Solanum lycopersicum HOM05D006083 ORTHO05D007634 1.9e-09 66.6 111 39.6
ClCG09G020050 Citrullus lanatus HOM05D006083 ORTHO05D007634 2.4e-09 66.2 84 41.7
Lj8C87G2 Lonicera japonica HOM05D006356 ORTHO05D007903 3.2e-09 65.9 109 33.9
CSS0008531 Camellia sinensis var. sinensis HOM05D006083 ORTHO05D007634 4.2e-09 65.5 79 45.6
RcHm_v2.0_Chr1g0366201 Rosa chinensis HOM05D006083 ORTHO05D007634 4.2e-09 65.5 93 41.9
TAR369G0895 Trochodendron aralioides HOM05D006083 ORTHO05D007634 7.1e-09 64.7 115 35.7
FAN06G0387 Fragaria x ananassa HOM05D006083 ORTHO05D007634 1.6e-08 63.5 118 36.4
PGR142G3850 Punica granatum HOM05D006083 ORTHO05D007634 1.6e-08 63.5 110 37.3
FAN01G1089 Fragaria x ananassa HOM05D006083 ORTHO05D007634 4.6e-08 62.0 118 36.4
FAN03G2083 Fragaria x ananassa HOM05D006083 ORTHO05D007634 4.6e-08 62.0 118 36.4
FAN06G5109 Fragaria x ananassa HOM05D006083 ORTHO05D007634 4.6e-08 62.0 118 36.4
Lsat_1_v5_gn_9_65161 Lactuca sativa HOM05D006083 ORTHO05D007634 2.3e-07 59.7 106 34.9
CAN.G786.23 Capsicum annuum HOM05D006083 ORTHO05D007634 3.9e-07 58.9 79 40.5
TAR623G0128 Trochodendron aralioides HOM05D006083 ORTHO05D007634 1.1e-06 57.4 118 31.4
Cc02_g08180 Coffea canephora HOM05D006083 ORTHO05D007634 1.5e-06 57.0 101 35.6
Sc06g0002680 Simmondsia chinensis HOM05D006083 ORTHO05D007634 2.5e-06 56.2 81 39.5
Lj1A934T60 Lonicera japonica HOM05D006083 ORTHO05D007634 3.3e-06 55.8 73 37.0
vmacro07157 Vaccinium macrocarpon HOM05D006083 ORTHO05D007634 4.3e-06 55.5 110 34.5
Carub.0004s2165 Capsella rubella HOM05D006083 ORTHO05D007634 5.6e-06 55.1 81 38.3
FvH4_7g21930 Fragaria vesca HOM05D006083 ORTHO05D007634 5.6e-06 55.1 92 37.0
FAN10G0925 Fragaria x ananassa HOM05D006083 ORTHO05D007634 9.6e-06 54.3 92 37.0


User provided reference genes

Program Settings