Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_29803_v3 Cicer arietinum L. HOM05D003842 ORTHO05D004436 3.5e-106 388.3 194 100.0
Ca_08873_v3 Cicer arietinum L. HOM05D003842 ORTHO05D004436 3.0e-105 385.2 194 99.5
Medtr7g102430 Medicago truncatula HOM05D003842 ORTHO05D004436 7.6e-101 370.5 194 95.4
TPR.G8693 Trifolium pratense HOM05D003842 ORTHO05D004436 6.5e-100 367.5 194 94.3
Glyma.19G186900 Glycine max HOM05D003842 ORTHO05D004436 1.8e-89 332.8 194 86.1
Phvul.001G181800 Phaseolus vulgaris HOM05D003842 ORTHO05D004436 1.1e-88 330.1 188 87.8
arahy.Tifrunner.gnm1.ann1.CVPH5H Arachis hypogaea HOM05D003842 ORTHO05D004436 2.2e-87 325.9 194 83.0
Lalb_Chr20g0112381 Lupinus albus HOM05D003842 ORTHO05D004436 6.3e-87 324.3 194 83.5
arahy.Tifrunner.gnm1.ann1.BQYP5G Arachis hypogaea HOM05D003842 ORTHO05D004436 9.1e-86 320.5 194 82.0
CiPaw.09G003300 Carya illinoinensis HOM05D003842 ORTHO05D004436 3.8e-76 288.5 194 70.6
Manes.08G013802 Manihot esculenta HOM05D003842 ORTHO05D004436 8.5e-76 287.3 194 72.7
Nitab4.5_0003314g0020 Nicotiana tabacum HOM05D003842 ORTHO05D004436 3.2e-75 285.4 194 71.1
Atru.chr8.1720 Acer truncatum HOM05D003842 ORTHO05D004436 4.2e-75 285.0 193 70.5
QL07p041738 Quercus lobata HOM05D003842 ORTHO05D004436 4.2e-75 285.0 194 72.2
TAR633G0529 Trochodendron aralioides HOM05D003842 ORTHO05D004436 9.4e-75 283.9 194 69.6
Potri.006G120800 Populus trichocarpa HOM05D003842 ORTHO05D004436 4.7e-74 281.6 194 71.1
Ca_29497_v3 Cicer arietinum L. HOM05D003842 ORTHO05D004436 8.0e-74 280.8 139 100.0
Nitab4.5_0002535g0020 Nicotiana tabacum HOM05D003842 ORTHO05D004436 8.0e-74 280.8 194 70.1
GSVIVG01033696001 Vitis vinifera HOM05D003842 ORTHO05D004436 2.3e-73 279.3 193 69.4
Haze_19462 Corylus avellana HOM05D003842 ORTHO05D004436 3.0e-73 278.9 194 69.1
Peaxi162Scf00435g01013 Petunia axillaris HOM05D003842 ORTHO05D004436 8.8e-73 277.3 194 68.6
Cfa016461 Carpinus fangiana HOM05D003842 ORTHO05D004436 2.0e-72 276.2 194 68.0
Gohir.A11G323300 Gossypium hirsutum HOM05D003842 ORTHO05D004436 2.0e-72 276.2 194 69.1
Oeu045240.1 Olea europaea HOM05D003842 ORTHO05D004436 2.0e-72 276.2 193 66.3
TWI74G0820 Tripterygium wilfordii HOM05D003842 ORTHO05D004436 2.0e-72 276.2 194 67.5
PGR142G1271 Punica granatum HOM05D003842 ORTHO05D004436 2.6e-72 275.8 194 69.6
Sopen09g003320 Solanum pennellii HOM05D003842 ORTHO05D004436 2.6e-72 275.8 194 66.5
Solyc09g008490.4 Solanum lycopersicum HOM05D003842 ORTHO05D004436 3.3e-72 275.4 194 66.5
Thecc.05G072900 Theobroma cacao HOM05D003842 ORTHO05D004436 5.7e-72 274.6 194 69.1
Migut.L01724 Erythranthe guttata HOM05D003842 ORTHO05D004436 7.5e-72 274.2 194 67.5
CAN.G1038.13 Capsicum annuum HOM05D003842 ORTHO05D004436 1.3e-71 273.5 194 67.5
Gorai.007G372400 Gossypium raimondii HOM05D003842 ORTHO05D004436 1.3e-71 273.5 194 68.6
CANSAT80G2389 Cannabis sativa HOM05D003842 ORTHO05D004436 3.7e-71 271.9 194 66.5
Gorai.006G160800 Gossypium raimondii HOM05D003842 ORTHO05D004436 3.7e-71 271.9 194 69.1
Gohir.D11G342400 Gossypium hirsutum HOM05D003842 ORTHO05D004436 4.8e-71 271.6 194 68.0
Gohir.A09G144400 Gossypium hirsutum HOM05D003842 ORTHO05D004436 2.4e-70 269.2 194 68.6
Nn6g35197 Nelumbo nucifera HOM05D003842 ORTHO05D004436 2.4e-70 269.2 194 66.5
Gohir.D09G140200 Gossypium hirsutum HOM05D003842 ORTHO05D004436 4.1e-70 268.5 194 68.6
MD12G1104900 Malus domestica HOM05D003842 ORTHO05D004436 4.1e-70 268.5 194 68.0
Lsat_1_v5_gn_6_28640 Lactuca sativa HOM05D003842 ORTHO05D004436 7.0e-70 267.7 193 66.8
HanXRQChr13g0400661 Helianthus annuus HOM05D003842 ORTHO05D004436 1.2e-69 266.9 195 68.7
Eucgr.K02431 Eucalyptus grandis HOM05D003842 ORTHO05D004436 1.6e-69 266.5 194 68.0
ClCG04G009540 Citrullus lanatus HOM05D003842 ORTHO05D004436 2.0e-69 266.2 194 64.4
MSTRG.26674 Avicennia marina HOM05D003842 ORTHO05D004436 3.8e-68 261.9 194 66.0
Duzib106G1778 Durio zibethinus HOM05D003842 ORTHO05D004436 5.0e-68 261.5 194 67.0
ECA233G4297 Erigeron canadensis HOM05D003842 ORTHO05D004436 8.5e-68 260.8 194 67.5
Rhsim03G0088500 Rhododendron simsii HOM05D003842 ORTHO05D004436 8.5e-68 260.8 194 63.9
SGA_v2.0_scaffold224G42922 Striga asiatica HOM05D003842 ORTHO05D004436 1.5e-67 260.0 194 63.9
Sc20g0005740 Simmondsia chinensis HOM05D003842 ORTHO05D004436 1.9e-67 259.6 194 64.4
FAN05G0072 Fragaria x ananassa HOM05D003842 ORTHO05D004436 4.2e-67 258.5 194 64.4
FAN05G4099 Fragaria x ananassa HOM05D003842 ORTHO05D004436 4.2e-67 258.5 194 64.4
MELO3C024492.2 Cucumis melo HOM05D003842 ORTHO05D004436 5.5e-67 258.1 194 62.4
FvH4_6g17010 Fragaria vesca HOM05D003842 ORTHO05D004436 7.2e-67 257.7 194 63.9
FAN02G1267 Fragaria x ananassa HOM05D003842 ORTHO05D004436 7.2e-67 257.7 194 64.4
CSS0023266 Camellia sinensis var. sinensis HOM05D003842 ORTHO05D004436 2.1e-66 256.1 195 63.6
FAN09G2316 Fragaria x ananassa HOM05D003842 ORTHO05D004436 3.6e-66 255.4 194 63.9
RcHm_v2.0_Chr3g0471001 Rosa chinensis HOM05D003842 ORTHO05D004436 3.6e-66 255.4 194 63.9
Sed0026042 Sechium edule HOM05D003842 ORTHO05D004436 4.7e-66 255.0 194 61.9
CsaV3_6G040160 Cucumis sativus L. HOM05D003842 ORTHO05D004436 1.0e-65 253.8 194 61.3
Ciclev10023867m.g Citrus clementina HOM05D003842 ORTHO05D004436 1.8e-65 253.1 194 61.3
Duzib093G0118 Durio zibethinus HOM05D003842 ORTHO05D004436 3.0e-65 252.3 194 66.0
PSO063G4107 Papaver somniferum HOM05D003842 ORTHO05D004436 1.2e-64 250.4 194 61.9
PSO339G3623 Papaver somniferum HOM05D003842 ORTHO05D004436 1.2e-64 250.4 194 61.9
Cpa.g.sc5.147 Carica papaya HOM05D003842 ORTHO05D004436 2.2e-63 246.1 194 62.4
THA.LOC104818591 Tarenaya hassleriana HOM05D003842 ORTHO05D004436 3.7e-63 245.4 194 61.3
CSS0021824 Camellia sinensis var. sinensis HOM05D003842 ORTHO05D004436 8.3e-63 244.2 195 62.6
Sabra06G0095000 Salix brachista HOM05D003842 ORTHO05D004436 1.8e-62 243.0 269 49.8
Aa31LG5G22020 Aethionema arabicum HOM05D003842 ORTHO05D004436 5.9e-61 238.0 194 59.3
Ah.08g211380 Amaranthus hybridus HOM05D003842 ORTHO05D004436 5.9e-61 238.0 194 58.8
ATR0043G024 Amborella trichopoda HOM05D003842 ORTHO05D004436 7.7e-61 237.7 188 58.5
EL10Ac7g16718 Beta vulgaris HOM05D003842 ORTHO05D004436 7.7e-61 237.7 194 58.8
Aqoxy1G01066 Aquilegia oxysepala HOM05D003842 ORTHO05D004436 4.2e-59 231.9 191 60.2
Thhalv10016131m.g Eutrema salsugineum HOM05D003842 ORTHO05D004436 7.2e-59 231.1 194 57.7
Cc06_g04620 Coffea canephora HOM05D003842 ORTHO05D004436 1.6e-58 229.9 194 58.2
Sp4g19070 Schrenkiella parvula HOM05D003842 ORTHO05D004436 6.1e-58 228.0 194 57.2
AL4G33000 Arabidopsis lyrata HOM05D003842 ORTHO05D004436 1.4e-57 226.9 194 57.2
A04p28120 Brassica napus HOM05D003842 ORTHO05D004436 1.4e-57 226.9 194 56.2
BolC4t28040H Brassica oleracea HOM05D003842 ORTHO05D004436 1.4e-57 226.9 194 56.2
Carub.0004s1865 Capsella rubella HOM05D003842 ORTHO05D004436 1.4e-57 226.9 194 57.2
C04p65510 Brassica napus HOM05D003842 ORTHO05D004436 2.3e-57 226.1 194 56.2
BraA04t18297Z Brassica rapa HOM05D003842 ORTHO05D004436 2.3e-57 226.1 194 56.2
Lj3C992G6 Lonicera japonica HOM05D003842 ORTHO05D004436 3.0e-57 225.7 156 66.0
CARHR131190 Cardamine hirsuta HOM05D003842 ORTHO05D004436 4.0e-57 225.3 194 57.2
Zm00001eb003810 Zea mays HOM05D003842 ORTHO05D004436 6.8e-57 224.6 184 57.1
AT2G36810 Arabidopsis thaliana HOM05D003842 ORTHO05D004436 4.4e-56 221.9 194 56.2
AUR62042272 Chenopodium quinoa HOM05D003842 ORTHO05D004436 1.8e-54 216.5 164 62.8
BcaC02g07579 Brassica carinata HOM05D003842 ORTHO05D004436 1.6e-53 213.4 200 54.5
Psat0s1048g0160 Pisum sativum HOM05D003842 ORTHO05D004436 1.3e-52 210.3 115 89.6
AUR62036532 Chenopodium quinoa HOM05D003842 ORTHO05D004436 5.2e-49 198.4 152 61.2
DCAR_020802 Daucus carota HOM05D003842 ORTHO05D004436 3.9e-44 182.2 194 51.0
Prupe.7G124700 Prunus persica HOM05D003842 ORTHO05D004436 1.4e-41 173.7 115 71.3
Actinidia26645 Actinidia chinensis HOM05D003842 ORTHO05D004436 3.1e-41 172.6 125 64.8
SEGI_39450 Sequoiadendron giganteum HOM05D003842 ORTHO05D004436 3.1e-41 172.6 154 51.9
Dinv35821 Davidia involucrata HOM05D003842 ORTHO05D004436 6.8e-41 171.4 117 66.7
SEGI_23674 Sequoiadendron giganteum HOM05D003842 ORTHO05D004436 8.9e-41 171.0 157 51.0
Ca_08928_v3 Cicer arietinum L. HOM05D003842 ORTHO05D004436 1.3e-39 167.2 84 98.8
CDE07G0268 Ceratophyllum demersum HOM05D003842 ORTHO05D004436 8.3e-39 164.5 207 45.4
Ca_31348_v3 Cicer arietinum L. HOM05D003842 ORTHO05D004436 1.9e-38 163.3 79 100.0
Mapoly0008s0039 Marchantia polymorpha HOM05D003842 ORTHO05D004436 2.7e-37 159.5 179 42.5
Pp3c2_21970 Physcomitrium patens HOM05D003842 ORTHO05D004436 1.0e-36 157.5 180 43.9
FAN14G4492 Fragaria x ananassa HOM05D003842 ORTHO05D004436 1.5e-35 153.7 110 67.3
Lj1g0002569 Lotus japonicus HOM05D003842 ORTHO05D004436 1.6e-34 150.2 89 83.1
Pp3c22_4780 Physcomitrium patens HOM05D003842 ORTHO05D004436 4.6e-29 132.1 175 37.1
SMO207G0008 Selaginella moellendorffii HOM05D003842 ORTHO05D004436 8.6e-28 127.9 195 35.9
Glyma.03G186800 Glycine max HOM05D003842 ORTHO05D004436 3.8e-23 112.5 72 79.2
CBR_g53950 Chara braunii HOM05D003842 ORTHO05D004436 1.4e-14 84.0 84 46.4
CBR_g37399 Chara braunii HOM05D003842 ORTHO05D004436 6.2e-10 68.6 95 37.9
AagrBONN_evm.TU.Sc2ySwM_228.1882 Anthoceros agrestis HOM05D003842 ORTHO05D004436 2.9e-07 59.7 57 45.6
COL.COLO4_26898 Corchorus olitorius HOM05D003842 ORTHO05D004436 2.9e-07 59.7 44 70.5


User provided reference genes

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