Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_29801_v3 Cicer arietinum L. HOM05D004694 ORTHO05D006576 7.8e-73 276.9 131 100.0
Ca_23555_v3 Cicer arietinum L. HOM05D004694 ORTHO05D006576 1.0e-72 276.6 131 99.2
Medtr8g028225 Medicago truncatula HOM05D004694 ORTHO05D006576 4.9e-59 231.1 131 84.7
TPR.G21293 Trifolium pratense HOM05D004694 ORTHO05D006576 3.2e-58 228.4 131 83.2
Glyma.17G128000 Glycine max HOM05D004694 ORTHO05D006576 5.1e-56 221.1 131 80.2
Lj4g0028142 Lotus japonicus HOM05D004694 ORTHO05D006576 1.1e-55 219.9 131 79.4
arahy.Tifrunner.gnm1.ann1.C9ULKZ Arachis hypogaea HOM05D004694 ORTHO05D006576 1.5e-55 219.5 131 78.6
arahy.Tifrunner.gnm1.ann1.EW3HTN Arachis hypogaea HOM05D004694 ORTHO05D006576 1.5e-55 219.5 131 78.6
arahy.Tifrunner.gnm1.ann1.J1V7G3 Arachis hypogaea HOM05D004694 ORTHO05D006576 1.5e-55 219.5 131 78.6
arahy.Tifrunner.gnm1.ann1.U91AM5 Arachis hypogaea HOM05D004694 ORTHO05D006576 1.5e-55 219.5 131 78.6
CiPaw.11G010700 Carya illinoinensis HOM05D004694 ORTHO05D006576 1.5e-55 219.5 131 78.6
arahy.Tifrunner.gnm1.ann1.18QE6Y Arachis hypogaea HOM05D004694 ORTHO05D006576 4.3e-55 218.0 131 78.6
arahy.Tifrunner.gnm1.ann1.0V01Q6 Arachis hypogaea HOM05D004694 ORTHO05D006576 5.6e-55 217.6 131 77.9
arahy.Tifrunner.gnm1.ann1.HVKI9W Arachis hypogaea HOM05D004694 ORTHO05D006576 2.8e-54 215.3 126 79.4
Lalb_Chr07g0183271 Lupinus albus HOM05D004694 ORTHO05D006576 1.1e-53 213.4 131 75.6
Cfa018868 Carpinus fangiana HOM05D004694 ORTHO05D006576 1.2e-52 209.9 132 75.8
Haze_07250 Corylus avellana HOM05D004694 ORTHO05D006576 2.0e-52 209.1 132 75.0
COL.COLO4_28061 Corchorus olitorius HOM05D004694 ORTHO05D006576 7.6e-52 207.2 126 77.0
Gohir.A07G053000 Gossypium hirsutum HOM05D004694 ORTHO05D006576 1.3e-51 206.5 121 77.7
Gorai.001G060900 Gossypium raimondii HOM05D004694 ORTHO05D006576 1.3e-51 206.5 121 77.7
Thecc.03G124900 Theobroma cacao HOM05D004694 ORTHO05D006576 1.3e-51 206.5 121 78.5
Ca_23552_v3 Cicer arietinum L. HOM05D004694 ORTHO05D006576 2.2e-51 205.7 131 79.4
Sopen03g030290 Solanum pennellii HOM05D004694 ORTHO05D006576 2.9e-51 205.3 123 75.6
Gohir.D07G057400 Gossypium hirsutum HOM05D004694 ORTHO05D006576 3.7e-51 204.9 121 76.9
Potri.015G092000 Populus trichocarpa HOM05D004694 ORTHO05D006576 3.7e-51 204.9 126 77.0
Rhsim12G0172800 Rhododendron simsii HOM05D004694 ORTHO05D006576 3.7e-51 204.9 124 75.0
Solyc03g111140.3 Solanum lycopersicum HOM05D004694 ORTHO05D006576 3.7e-51 204.9 123 74.8
QL10p004544 Quercus lobata HOM05D004694 ORTHO05D006576 4.9e-51 204.5 126 75.4
Duzib205G1411 Durio zibethinus HOM05D004694 ORTHO05D006576 6.4e-51 204.1 126 76.2
PGR044G1202 Punica granatum HOM05D004694 ORTHO05D006576 8.4e-51 203.8 131 75.6
Eucgr.K02748 Eucalyptus grandis HOM05D004694 ORTHO05D006576 1.1e-50 203.4 132 72.0
Lj5C97G9 Lonicera japonica HOM05D004694 ORTHO05D006576 1.1e-50 203.4 129 71.3
VMungo1215G0651 Vigna mungo HOM05D004694 ORTHO05D006576 3.2e-50 201.8 113 83.2
vmacro16662 Vaccinium macrocarpon HOM05D004694 ORTHO05D006576 4.1e-50 201.4 124 73.4
DCAR_016413 Daucus carota HOM05D004694 ORTHO05D006576 5.4e-50 201.1 126 73.0
Cpa.g.sc4.107 Carica papaya HOM05D004694 ORTHO05D006576 9.2e-50 200.3 131 71.0
CAN.G352.42 Capsicum annuum HOM05D004694 ORTHO05D006576 1.2e-49 199.9 123 74.0
Ciclev10019499m.g Citrus clementina HOM05D004694 ORTHO05D006576 1.2e-49 199.9 125 76.0
PGSC0003DMG400015192 Solanum tuberosum HOM05D004694 ORTHO05D006576 1.2e-49 199.9 123 74.0
TAR622G1078 Trochodendron aralioides HOM05D004694 ORTHO05D006576 1.2e-49 199.9 131 69.5
Actinidia36796 Actinidia chinensis HOM05D004694 ORTHO05D006576 3.5e-49 198.4 116 75.9
Nitab4.5_0001664g0050 Nicotiana tabacum HOM05D004694 ORTHO05D006576 3.5e-49 198.4 111 80.2
Peaxi162Scf00089g00419 Petunia axillaris HOM05D004694 ORTHO05D006576 3.5e-49 198.4 111 80.2
Solyc03g111130.1 Solanum lycopersicum HOM05D004694 ORTHO05D006576 3.5e-49 198.4 111 79.3
Sopen03g030280 Solanum pennellii HOM05D004694 ORTHO05D006576 3.5e-49 198.4 111 79.3
Prupe.5G154600 Prunus persica HOM05D004694 ORTHO05D006576 4.6e-49 198.0 129 72.1
PSO017G1181 Papaver somniferum HOM05D004694 ORTHO05D006576 6.0e-49 197.6 120 75.8
Aqoxy3G01456 Aquilegia oxysepala HOM05D004694 ORTHO05D006576 1.0e-48 196.8 111 79.3
TWI39G0550 Tripterygium wilfordii HOM05D004694 ORTHO05D006576 1.0e-48 196.8 126 73.8
MELO3C002350.2 Cucumis melo HOM05D004694 ORTHO05D006576 1.3e-48 196.4 111 80.2
CsaV3_1G009520 Cucumis sativus L. HOM05D004694 ORTHO05D006576 1.3e-48 196.4 111 80.2
Sc14g0007560 Simmondsia chinensis HOM05D004694 ORTHO05D006576 1.3e-48 196.4 124 71.8
THA.LOC104825008 Tarenaya hassleriana HOM05D004694 ORTHO05D006576 1.3e-48 196.4 131 67.2
HanXRQChr05g0154041 Helianthus annuus HOM05D004694 ORTHO05D006576 1.7e-48 196.1 114 75.4
Nitab4.5_0003680g0030 Nicotiana tabacum HOM05D004694 ORTHO05D006576 1.7e-48 196.1 126 72.2
PSO478G2802 Papaver somniferum HOM05D004694 ORTHO05D006576 1.7e-48 196.1 120 75.0
Hma1.2p1_0014F.1_g009775 Hydrangea macrophylla HOM05D004694 ORTHO05D006576 2.3e-48 195.7 125 70.4
CAN.G352.43 Capsicum annuum HOM05D004694 ORTHO05D006576 3.9e-48 194.9 123 72.4
AUR62029660 Chenopodium quinoa HOM05D004694 ORTHO05D006576 3.9e-48 194.9 131 68.7
MD06G1147700 Malus domestica HOM05D004694 ORTHO05D006576 3.9e-48 194.9 129 70.5
EL10As4g23460 Beta vulgaris HOM05D004694 ORTHO05D006576 5.1e-48 194.5 131 69.5
ClCG03G003600 Citrullus lanatus HOM05D004694 ORTHO05D006576 6.6e-48 194.1 111 79.3
Nn4g22401 Nelumbo nucifera HOM05D004694 ORTHO05D006576 6.6e-48 194.1 111 80.2
FvH4_5g07710 Fragaria vesca HOM05D004694 ORTHO05D006576 8.6e-48 193.7 111 76.6
FAN08G1582 Fragaria x ananassa HOM05D004694 ORTHO05D006576 8.6e-48 193.7 111 76.6
Dinv04852 Davidia involucrata HOM05D004694 ORTHO05D006576 1.1e-47 193.4 132 70.5
Thhalv10015335m.g Eutrema salsugineum HOM05D004694 ORTHO05D006576 1.1e-47 193.4 114 75.4
Lsat_1_v5_gn_5_13501 Lactuca sativa HOM05D004694 ORTHO05D006576 1.1e-47 193.4 119 73.1
BraA02t04789Z Brassica rapa HOM05D004694 ORTHO05D006576 1.5e-47 193.0 114 75.4
FAN04G1296 Fragaria x ananassa HOM05D004694 ORTHO05D006576 1.9e-47 192.6 111 75.7
Sed0009275 Sechium edule HOM05D004694 ORTHO05D006576 1.9e-47 192.6 116 75.9
Actinidia08860 Actinidia chinensis HOM05D004694 ORTHO05D006576 2.5e-47 192.2 131 68.7
Cc04_g10080 Coffea canephora HOM05D004694 ORTHO05D006576 2.5e-47 192.2 126 69.0
Migut.I00493 Erythranthe guttata HOM05D004694 ORTHO05D006576 2.5e-47 192.2 115 73.9
Sp6g38870 Schrenkiella parvula HOM05D004694 ORTHO05D006576 2.5e-47 192.2 114 74.6
BolC2t06123H Brassica oleracea HOM05D004694 ORTHO05D006576 3.3e-47 191.8 114 74.6
AUR62025866 Chenopodium quinoa HOM05D004694 ORTHO05D006576 3.3e-47 191.8 131 68.7
FAN18G1141 Fragaria x ananassa HOM05D004694 ORTHO05D006576 3.3e-47 191.8 111 75.7
BcaB05g21798 Brassica carinata HOM05D004694 ORTHO05D006576 4.3e-47 191.4 114 74.6
CSS0001791 Camellia sinensis var. sinensis HOM05D004694 ORTHO05D006576 5.6e-47 191.0 111 76.6
CANSAT11G0344 Cannabis sativa HOM05D004694 ORTHO05D006576 7.3e-47 190.7 114 72.8
CARHR209400 Cardamine hirsuta HOM05D004694 ORTHO05D006576 7.3e-47 190.7 114 73.7
AL6G13430 Arabidopsis lyrata HOM05D004694 ORTHO05D006576 1.2e-46 189.9 114 73.7
Aa31LG1G21410 Aethionema arabicum HOM05D004694 ORTHO05D006576 2.8e-46 188.7 111 73.9
RcHm_v2.0_Chr7g0190721 Rosa chinensis HOM05D004694 ORTHO05D006576 3.6e-46 188.3 129 65.9
Atru.chr9.1027_Atru.chr9.1028 Acer truncatum HOM05D004694 ORTHO05D006576 4.7e-46 188.0 132 66.7
Sopen03g030270 Solanum pennellii HOM05D004694 ORTHO05D006576 4.7e-46 188.0 127 67.7
AT5G03860 Arabidopsis thaliana HOM05D004694 ORTHO05D006576 6.2e-46 187.6 114 72.8
PGSC0003DMG400015194 Solanum tuberosum HOM05D004694 ORTHO05D006576 6.2e-46 187.6 127 68.5
Sabra15G0113800 Salix brachista HOM05D004694 ORTHO05D006576 1.1e-45 186.8 131 68.7
C02p01580 Brassica napus HOM05D004694 ORTHO05D006576 1.4e-45 186.4 114 72.8
Carub.0006s0280 Capsella rubella HOM05D004694 ORTHO05D006576 1.4e-45 186.4 114 72.8
CDE09G0730 Ceratophyllum demersum HOM05D004694 ORTHO05D006576 1.4e-45 186.4 115 73.0
ECA246G0215 Erigeron canadensis HOM05D004694 ORTHO05D006576 1.8e-45 186.0 111 74.8
Hund10205 Selenicereus undatus HOM05D004694 ORTHO05D006576 1.8e-45 186.0 134 67.2
MSTRG.9318 Avicennia marina HOM05D004694 ORTHO05D006576 3.1e-45 185.3 114 69.3
SalBow5G3571 Salvia bowleyana HOM05D004694 ORTHO05D006576 4.0e-45 184.9 126 67.5
VMungo1215G1303 Vigna mungo HOM05D004694 ORTHO05D006576 4.0e-45 184.9 113 75.2
MBI11_g05409_MAGBIO Magnolia biondii HOM05D004694 ORTHO05D006576 5.2e-45 184.5 114 70.2
Glyma.17G128100 Glycine max HOM05D004694 ORTHO05D006576 1.2e-44 183.3 114 74.6
Phvul.003G209200 Phaseolus vulgaris HOM05D004694 ORTHO05D006576 1.5e-44 183.0 124 69.4
Glyma.05G045900 Glycine max HOM05D004694 ORTHO05D006576 2.6e-44 182.2 114 72.8
SGA_v2.0_scaffold80G25701 Striga asiatica HOM05D004694 ORTHO05D006576 2.6e-44 182.2 111 72.1
SalBow1G0618 Salvia bowleyana HOM05D004694 ORTHO05D006576 2.4e-42 175.6 111 70.3
unitig_21.g20324 Utricularia gibba HOM05D004694 ORTHO05D006576 2.4e-42 175.6 111 73.0
SalBow1G1465 Salvia bowleyana HOM05D004694 ORTHO05D006576 7.1e-42 174.1 111 69.4
SalBow1G5822 Salvia bowleyana HOM05D004694 ORTHO05D006576 7.1e-42 174.1 111 69.4
SalBow1G3673 Salvia bowleyana HOM05D004694 ORTHO05D006576 6.0e-41 171.0 111 69.4
SalBow1G5430 Salvia bowleyana HOM05D004694 ORTHO05D006576 6.0e-41 171.0 111 69.4
ATR0824G173 Amborella trichopoda HOM05D004694 ORTHO05D006576 7.8e-41 170.6 111 66.7
HPP92_023361 Vanilla planifolia HOM05D004694 ORTHO05D006576 2.3e-40 169.1 112 66.1
Zm00001eb079170 Zea mays HOM05D004694 ORTHO05D006576 2.8e-38 162.2 112 69.6
Ah.11g044960 Amaranthus hybridus HOM05D004694 ORTHO05D006576 1.1e-37 160.2 111 66.7
GSVIVG01008494001 Vitis vinifera HOM05D004694 ORTHO05D006576 4.0e-37 158.3 126 62.7
Os04g0486950 Oryza sativa ssp. japonica HOM05D004694 ORTHO05D006576 7.6e-36 154.1 113 66.4
BcaB01g05780 Brassica carinata HOM05D004694 ORTHO05D006576 1.1e-34 150.2 91 71.4
SEGI_27575 Sequoiadendron giganteum HOM05D004694 ORTHO05D006576 1.9e-34 149.4 110 61.8
FAN13G0009 Fragaria x ananassa HOM05D004694 ORTHO05D006576 2.1e-33 146.0 87 70.1
Oeu044618.1 Olea europaea HOM05D004694 ORTHO05D006576 4.6e-33 144.8 94 73.4
Pp3c20_22510 Physcomitrium patens HOM05D004694 ORTHO05D006576 6.0e-33 144.4 123 52.0
SMO367G0555 Selaginella moellendorffii HOM05D004694 ORTHO05D006576 1.9e-31 139.4 111 57.7
Mapoly0154s0035 Marchantia polymorpha HOM05D004694 ORTHO05D006576 3.6e-30 135.2 109 54.1
AagrBONN_evm.TU.Sc2ySwM_228.3843 Anthoceros agrestis HOM05D004694 ORTHO05D006576 1.4e-29 133.3 110 54.5
CBR_g26132 Chara braunii HOM05D004694 ORTHO05D006576 1.4e-29 133.3 113 57.5
AagrBONN_evm.TU.Sc2ySwM_117.2387 Anthoceros agrestis HOM05D004694 ORTHO05D006576 2.4e-26 122.5 105 52.4
SalBow1G3079 Salvia bowleyana HOM05D004694 ORTHO05D006576 5.6e-23 111.3 72 66.7
TAR374G0737 Trochodendron aralioides HOM05D004694 ORTHO05D002940 7.4e-23 110.9 117 52.1
AUR62040389 Chenopodium quinoa HOM05D003382 ORTHO05D003930 2.0e-20 102.8 68 66.2
CDE08G1017 Ceratophyllum demersum HOM05D004694 ORTHO05D006576 1.0e-16 90.5 75 61.3
Cre03.g144807 Chlamydomonas reinhardtii HOM05D004694 ORTHO05D006576 2.8e-14 82.4 107 42.1
Ca_28596_v3 Cicer arietinum L. HOM05D004694 ORTHO05D148954 4.8e-14 81.6 93 43.0
AagrBONN_evm.TU.Sc2ySwM_344.4962 Anthoceros agrestis HOM05D004694 ORTHO05D006576 5.9e-12 74.7 109 35.8


User provided reference genes

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