Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_29759_v3 Cicer arietinum L. HOM05D005582 ORTHO05D007028 1.7e-202 709.1 368 100.0
Psat6g203520 Pisum sativum HOM05D005582 ORTHO05D007028 2.6e-190 668.7 367 93.2
Medtr1g102710 Medicago truncatula HOM05D005582 ORTHO05D007028 4.1e-188 661.4 367 93.2
Ca_10845_v3 Cicer arietinum L. HOM05D005582 ORTHO05D007028 7.0e-188 660.6 368 94.8
Ca_10846_v3 Cicer arietinum L. HOM05D005582 ORTHO05D007028 9.2e-188 660.2 367 94.8
Lj5g0009067 Lotus japonicus HOM05D005582 ORTHO05D007028 1.9e-185 652.5 366 90.7
Glyma.10G243400 Glycine max HOM05D005582 ORTHO05D007028 1.8e-183 646.0 367 89.9
Glyma.20G150800 Glycine max HOM05D005582 ORTHO05D007028 2.2e-181 639.0 366 89.1
VMungo0720G3059 Vigna mungo HOM05D005582 ORTHO05D007028 5.0e-178 627.9 366 86.3
Phvul.007G062300 Phaseolus vulgaris HOM05D005582 ORTHO05D007028 1.5e-177 626.3 366 85.8
Lalb_Chr06g0160761 Lupinus albus HOM05D005582 ORTHO05D007028 5.6e-177 624.4 367 87.2
TPR.G26104 Trifolium pratense HOM05D005582 ORTHO05D007028 7.8e-171 604.0 366 86.1
arahy.Tifrunner.gnm1.ann1.6ZCT8S Arachis hypogaea HOM05D005582 ORTHO05D007028 3.2e-164 582.0 378 80.4
arahy.Tifrunner.gnm1.ann1.ZZ97E1 Arachis hypogaea HOM05D005582 ORTHO05D007028 3.1e-159 565.5 366 81.1
QL06p013845 Quercus lobata HOM05D005582 ORTHO05D007028 2.3e-154 549.3 367 74.4
QL93p1872_0012 Quercus lobata HOM05D005582 ORTHO05D007028 2.3e-154 549.3 367 74.4
Manes.15G004000 Manihot esculenta HOM05D005582 ORTHO05D007028 1.8e-151 539.7 366 73.0
Duzib151G1162 Durio zibethinus HOM05D005582 ORTHO05D007028 2.4e-151 539.3 367 73.6
Ciclev10004134m.g Citrus clementina HOM05D005582 ORTHO05D007028 1.2e-150 537.0 366 73.0
Dinv29525 Davidia involucrata HOM05D005582 ORTHO05D007028 4.4e-150 535.0 367 72.8
Thecc.04G310500 Theobroma cacao HOM05D005582 ORTHO05D007028 2.9e-149 532.3 367 73.0
CiPaw.02G071000 Carya illinoinensis HOM05D005582 ORTHO05D007028 9.3e-148 527.3 367 71.9
Cfa015717 Carpinus fangiana HOM05D005582 ORTHO05D007028 2.7e-147 525.8 367 72.2
Haze_00795 Corylus avellana HOM05D005582 ORTHO05D007028 3.0e-146 522.3 367 71.7
Atru.chr11.54 Acer truncatum HOM05D005582 ORTHO05D007028 1.5e-145 520.0 366 71.3
Gohir.D09G066800 Gossypium hirsutum HOM05D005582 ORTHO05D007028 3.3e-145 518.8 367 71.4
Gorai.006G081300 Gossypium raimondii HOM05D005582 ORTHO05D007028 7.3e-145 517.7 367 71.1
TWI53G0357 Tripterygium wilfordii HOM05D005582 ORTHO05D007028 2.0e-142 509.6 366 68.3
Gohir.A09G067200 Gossypium hirsutum HOM05D005582 ORTHO05D007028 7.6e-142 507.7 366 70.2
GSVIVG01017662001 Vitis vinifera HOM05D005582 ORTHO05D007028 7.6e-142 507.7 366 69.9
Nn4g25411 Nelumbo nucifera HOM05D005582 ORTHO05D007028 2.2e-141 506.1 366 68.9
Potri.010G153300 Populus trichocarpa HOM05D005582 ORTHO05D007028 1.9e-140 503.1 366 69.4
GSVIVG01017603001 Vitis vinifera HOM05D005582 ORTHO05D007028 3.2e-140 502.3 366 69.1
RcHm_v2.0_Chr4g0426871 Rosa chinensis HOM05D005582 ORTHO05D007028 4.2e-140 501.9 366 69.9
CSS0025323 Camellia sinensis var. sinensis HOM05D005582 ORTHO05D007028 1.6e-139 500.0 371 68.2
CsaV3_6G000150 Cucumis sativus L. HOM05D005582 ORTHO05D007028 2.7e-139 499.2 366 66.9
Prupe.1G108200 Prunus persica HOM05D005582 ORTHO05D007028 1.0e-138 497.3 367 69.5
Lj3C839G18 Lonicera japonica HOM05D005582 ORTHO05D007028 1.8e-138 496.5 366 67.5
FvH4_4g21250 Fragaria vesca HOM05D005582 ORTHO05D007028 1.1e-137 493.8 366 69.1
Actinidia01057 Actinidia chinensis HOM05D005582 ORTHO05D007028 1.5e-137 493.4 366 67.2
PGR031G2985 Punica granatum HOM05D005582 ORTHO05D007028 3.7e-136 488.8 368 67.4
vmacro08001 Vaccinium macrocarpon HOM05D005582 ORTHO05D007028 6.2e-136 488.0 380 66.8
FAN07G0038 Fragaria x ananassa HOM05D005582 ORTHO05D007028 8.1e-136 487.6 366 69.1
Sabra10G0117900 Salix brachista HOM05D005582 ORTHO05D007028 6.9e-135 484.6 395 63.0
Eucgr.B02209 Eucalyptus grandis HOM05D005582 ORTHO05D007028 1.2e-134 483.8 369 65.6
MD13G1143700 Malus domestica HOM05D005582 ORTHO05D007028 1.2e-134 483.8 366 68.6
Sed0007110 Sechium edule HOM05D005582 ORTHO05D007028 4.5e-134 481.9 366 66.7
ClCG06G004260 Citrullus lanatus HOM05D005582 ORTHO05D007028 9.9e-134 480.7 365 65.2
AUR62029987 Chenopodium quinoa HOM05D005582 ORTHO05D007028 2.4e-132 476.1 365 64.9
Rhsim04G0247200 Rhododendron simsii HOM05D005582 ORTHO05D007028 9.3e-132 474.2 371 66.3
MELO3C021237.2 Cucumis melo HOM05D005582 ORTHO05D007028 3.5e-131 472.2 389 62.0
HanXRQChr05g0148391 Helianthus annuus HOM05D005582 ORTHO05D007028 7.9e-131 471.1 366 63.1
Sc25g0001750 Simmondsia chinensis HOM05D005582 ORTHO05D007028 2.3e-130 469.5 366 63.4
PSO170G3214 Papaver somniferum HOM05D005582 ORTHO05D007028 2.5e-129 466.1 366 62.6
CANSAT01G1159 Cannabis sativa HOM05D005582 ORTHO05D007028 9.6e-129 464.2 366 66.1
AUR62002565 Chenopodium quinoa HOM05D005582 ORTHO05D007028 2.1e-128 463.0 365 63.3
Lsat_1_v5_gn_6_117861 Lactuca sativa HOM05D001037 ORTHO05D007028 1.1e-127 460.7 366 63.4
Aqoxy5G02775 Aquilegia oxysepala HOM05D005582 ORTHO05D007028 1.2e-126 457.2 366 61.5
ATR0796G139 Amborella trichopoda HOM05D005582 ORTHO05D007028 7.6e-126 454.5 366 62.6
ECA246G0223 Erigeron canadensis HOM05D005582 ORTHO05D007028 1.3e-125 453.8 366 61.7
Carub.0006s1680 Capsella rubella HOM05D005582 ORTHO05D007028 1.9e-124 449.9 366 60.9
AT5G18525 Arabidopsis thaliana HOM05D005582 ORTHO05D007028 2.1e-123 446.4 366 60.1
Migut.N00012 Erythranthe guttata HOM05D005582 ORTHO05D007028 2.7e-123 446.0 366 61.7
Ah.07g203770 Amaranthus hybridus HOM05D005582 ORTHO05D007028 4.6e-123 445.3 362 61.3
AL6G29800 Arabidopsis lyrata HOM05D005582 ORTHO05D007028 4.6e-123 445.3 366 59.8
EL10Ac3g06266 Beta vulgaris HOM05D005582 ORTHO05D007028 7.9e-123 444.5 367 61.6
Sp6g25800 Schrenkiella parvula HOM05D005582 ORTHO05D007028 1.3e-122 443.7 366 59.8
Thhalv10012423m.g Eutrema salsugineum HOM05D005582 ORTHO05D007028 3.0e-122 442.6 366 60.1
Sopen12g033750 Solanum pennellii HOM05D005582 ORTHO05D007028 1.5e-121 440.3 366 63.1
MSTRG.19398 Avicennia marina HOM05D005582 ORTHO05D007028 4.3e-121 438.7 366 60.7
A10p21030 Brassica napus HOM05D005582 ORTHO05D007028 4.3e-121 438.7 366 60.1
C09p57960 Brassica napus HOM05D005582 ORTHO05D007028 4.3e-121 438.7 366 59.8
BolC9t58663H Brassica oleracea HOM05D005582 ORTHO05D007028 4.3e-121 438.7 366 59.8
BraA10t44167Z Brassica rapa HOM05D005582 ORTHO05D007028 4.3e-121 438.7 366 60.1
Nitab4.5_0004665g0020 Nicotiana tabacum HOM05D005582 ORTHO05D007028 5.7e-121 438.3 366 62.0
Nitab4.5_0000895g0160 Nicotiana tabacum HOM05D005582 ORTHO05D007028 1.6e-120 436.8 366 61.7
BcaB08g36669 Brassica carinata HOM05D005582 ORTHO05D007028 3.1e-119 432.6 365 58.9
THA.LOC104818852 Tarenaya hassleriana HOM05D005582 ORTHO05D007028 3.1e-119 432.6 365 58.6
FAN12G2136 Fragaria x ananassa HOM05D005582 ORTHO05D007028 2.6e-118 429.5 366 62.0
Aa31LG11G11190 Aethionema arabicum HOM05D005582 ORTHO05D007028 3.8e-117 425.6 366 57.9
DCAR_023392 Daucus carota HOM05D005582 ORTHO05D007028 6.5e-117 424.9 370 59.7
Hund12246 Selenicereus undatus HOM05D005582 ORTHO05D007028 1.9e-116 423.3 366 59.6
Cc03_g00260 Coffea canephora HOM05D005582 ORTHO05D007028 7.2e-116 421.4 366 59.0
Peaxi162Scf01194g00137 Petunia axillaris HOM05D005582 ORTHO05D007028 2.7e-115 419.5 366 61.5
SalBow5G3991 Salvia bowleyana HOM05D005582 ORTHO05D007028 2.3e-114 416.4 366 56.8
SGA_v2.0_scaffold227G43203 Striga asiatica HOM05D005582 ORTHO05D007028 6.7e-114 414.8 366 58.2
BcaB08g36665 Brassica carinata HOM05D005582 ORTHO05D007028 2.9e-109 399.4 366 55.5
Solyc12g099010.3 Solanum lycopersicum HOM05D005582 ORTHO05D007028 8.5e-109 397.9 340 61.2
Zm00001eb131030 Zea mays HOM05D005582 ORTHO05D007028 9.4e-108 394.4 366 54.4
CDE02G3337 Ceratophyllum demersum HOM05D005582 ORTHO05D007028 1.2e-107 394.0 367 56.1
Oeu022697.1 Olea europaea HOM05D005582 ORTHO05D007028 2.7e-107 392.9 366 58.5
TAR362G0979 Trochodendron aralioides HOM05D005582 ORTHO05D007028 4.8e-104 382.1 366 55.2
CAN.G484.83 Capsicum annuum HOM05D005582 ORTHO05D007028 3.8e-101 372.5 316 62.0
COL.COLO4_34545 Corchorus olitorius HOM05D005582 ORTHO05D007028 7.2e-100 368.2 293 65.9
SEGI_37408 Sequoiadendron giganteum HOM05D005582 ORTHO05D007028 2.8e-96 356.3 375 49.6
HPP92_010030 Vanilla planifolia HOM05D005582 ORTHO05D007028 1.0e-93 347.8 366 48.9
Cpa.g.sc146.39 Carica papaya HOM05D005582 ORTHO05D007028 4.4e-89 332.4 370 51.6
CSS0001073 Camellia sinensis var. sinensis HOM05D005582 ORTHO05D007028 2.1e-83 313.5 380 49.7
BcaC04g18671 Brassica carinata HOM05D005582 ORTHO05D007028 6.6e-77 292.0 366 44.8
Ca_10843_v3 Cicer arietinum L. HOM05D005582 ORTHO05D007028 1.0e-74 284.6 149 99.3
Ca_10844_v3 Cicer arietinum L. HOM05D005582 ORTHO05D007028 1.0e-74 284.6 149 99.3
CARHR194490 Cardamine hirsuta HOM05D005582 ORTHO05D007028 3.1e-71 273.1 203 65.5
DCAR_023431 Daucus carota HOM05D005582 ORTHO05D007028 3.1e-71 273.1 239 57.7
Mapoly0075s0059 Marchantia polymorpha HOM05D005582 ORTHO05D007028 1.5e-65 254.2 352 37.8
AagrBONN_evm.TU.Sc2ySwM_344.3353 Anthoceros agrestis HOM05D005582 ORTHO05D007028 2.4e-47 193.7 327 36.1
HPP92_015254 Vanilla planifolia HOM05D005582 ORTHO05D007028 1.9e-44 184.1 275 41.8
SMO203G0100 Selaginella moellendorffii HOM05D005582 ORTHO05D007028 2.9e-16 90.5 110 43.6
CBR_g49232 Chara braunii HOM05D005582 ORTHO05D007028 3.8e-16 90.1 224 27.7
Actinidia32217 Actinidia chinensis HOM05D005582 ORTHO05D007028 2.8e-11 73.9 98 46.9
Rhsim03G0109500 Rhododendron simsii HOM05D005582 ORTHO05D004029 3.1e-10 70.5 60 60.0


User provided reference genes

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