Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25471_v3 Cicer arietinum L. HOM05D003094 ORTHO05D003482 1.1e-55 220.3 162 100.0
Ca_29690_v3 Cicer arietinum L. HOM05D003094 ORTHO05D003482 1.1e-55 220.3 162 100.0
Psat1g035120 Pisum sativum HOM05D003094 ORTHO05D003482 5.9e-38 161.4 124 75.0
Medtr6g082590 Medicago truncatula HOM05D003094 ORTHO05D003482 3.6e-35 152.1 126 69.0
TPR.G25985 Trifolium pratense HOM05D003094 ORTHO05D003482 9.4e-28 127.5 91 76.9
Lj2g0001179 Lotus japonicus HOM05D003094 ORTHO05D003482 2.2e-24 116.3 125 58.4
arahy.Tifrunner.gnm1.ann1.J45ZPD Arachis hypogaea HOM05D003094 ORTHO05D003482 4.5e-22 108.6 130 53.8
Phvul.004G153600 Phaseolus vulgaris HOM05D003094 ORTHO05D003482 5.9e-22 108.2 113 56.6
Glyma.09G180400 Glycine max HOM05D003094 ORTHO05D003482 1.0e-21 107.5 113 58.4
arahy.Tifrunner.gnm1.ann1.53L2ET Arachis hypogaea HOM05D010130 ORTHO05D010480 2.2e-21 106.3 130 53.1
VMungo0464G0085 Vigna mungo HOM05D013688 ORTHO05D013355 2.2e-21 106.3 113 58.4
Glyma.07G097400 Glycine max HOM05D003094 ORTHO05D003482 9.4e-20 100.9 113 56.6
Atru.chr9.906 Acer truncatum HOM05D003094 ORTHO05D003482 4.2e-12 75.5 78 50.0
QL10p026559 Quercus lobata HOM05D003094 ORTHO05D003482 6.1e-11 71.6 115 40.9
MD06G1220600 Malus domestica HOM05D003094 ORTHO05D003482 1.0e-10 70.9 123 37.4
Gohir.D07G064100 Gossypium hirsutum HOM05D003094 ORTHO05D003482 1.8e-10 70.1 62 53.2
Dinv07353 Davidia involucrata HOM05D003094 ORTHO05D003482 3.0e-10 69.3 139 39.6
Gorai.001G067600 Gossypium raimondii HOM05D003094 ORTHO05D003482 4.0e-10 68.9 62 51.6
Peaxi162Scf00683g00019 Petunia axillaris HOM05D003094 ORTHO05D003482 4.0e-10 68.9 122 36.1
Dinv09627 Davidia involucrata HOM05D003094 ORTHO05D003482 5.2e-10 68.6 139 39.6
Dinv17506 Davidia involucrata HOM05D003094 ORTHO05D003482 8.8e-10 67.8 115 40.9
CiPaw.16G089200 Carya illinoinensis HOM05D003094 ORTHO05D003482 2.0e-09 66.6 129 37.2
Nitab4.5_0001986g0080 Nicotiana tabacum HOM05D003094 ORTHO05D003482 2.0e-09 66.6 62 54.8
CiPaw.16G089100 Carya illinoinensis HOM05D003094 ORTHO05D003482 2.6e-09 66.2 122 36.1
Gohir.A07G059300 Gossypium hirsutum HOM05D003094 ORTHO05D003482 2.6e-09 66.2 101 39.6
Cc04_g06850 Coffea canephora HOM05D003094 ORTHO05D003482 3.4e-09 65.9 104 41.3
Lsat_1_v5_gn_8_141460 Lactuca sativa HOM05D003094 ORTHO05D003482 3.4e-09 65.9 112 34.8
Lalb_Chr22g0353211 Lupinus albus HOM05D003094 ORTHO05D003482 3.4e-09 65.9 38 84.2
Cfa019731 Carpinus fangiana HOM05D003094 ORTHO05D003482 5.7e-09 65.1 63 52.4
Gorai.002G151500 Gossypium raimondii HOM05D003094 ORTHO05D003482 7.5e-09 64.7 128 35.2
Gorai.013G170500 Gossypium raimondii HOM05D003094 ORTHO05D003482 9.8e-09 64.3 138 34.8
Solyc03g119160.3 Solanum lycopersicum HOM05D003094 ORTHO05D003482 9.8e-09 64.3 93 38.7
Gohir.A13G146300 Gossypium hirsutum HOM05D003094 ORTHO05D003482 1.3e-08 63.9 138 34.8
Gohir.D13G151300 Gossypium hirsutum HOM05D003094 ORTHO05D003482 1.3e-08 63.9 138 34.8
Sc10g0009380 Simmondsia chinensis HOM05D003094 ORTHO05D003482 1.7e-08 63.5 106 39.6
PGSC0003DMG401005733 Solanum tuberosum HOM05D003094 ORTHO05D003482 1.7e-08 63.5 72 45.8
Duzib213G0897 Durio zibethinus HOM05D003094 ORTHO05D003482 2.2e-08 63.2 128 35.9
Psat7g083520 Pisum sativum HOM05D003094 ORTHO05D003482 2.2e-08 63.2 118 33.9
Rhsim10G0183200 Rhododendron simsii HOM05D003094 ORTHO05D003482 2.2e-08 63.2 75 45.3
Ah.11g047710 Amaranthus hybridus HOM05D003094 ORTHO05D003482 2.8e-08 62.8 67 49.3
Haze_18735 Corylus avellana HOM05D003094 ORTHO05D003482 2.8e-08 62.8 62 48.4
Gohir.A13G146900 Gossypium hirsutum HOM05D003094 ORTHO05D003482 2.8e-08 62.8 138 34.1
Gohir.D13G152004 Gossypium hirsutum HOM05D003094 ORTHO05D003482 3.7e-08 62.4 138 34.1
Prupe.5G225000 Prunus persica HOM05D003094 ORTHO05D003482 3.7e-08 62.4 117 42.7
Duzib084G0458 Durio zibethinus HOM05D003094 ORTHO05D003482 4.9e-08 62.0 111 36.0
QL10p026547 Quercus lobata HOM05D003094 ORTHO05D003482 4.9e-08 62.0 52 57.7
RcHm_v2.0_Chr7g0179411 Rosa chinensis HOM05D003094 ORTHO05D003482 4.9e-08 62.0 120 36.7
vmacro16434 Vaccinium macrocarpon HOM05D003094 ORTHO05D003482 4.9e-08 62.0 93 39.8
Dinv12225 Davidia involucrata HOM05D003094 ORTHO05D003482 6.3e-08 61.6 124 37.9
FvH4_5g16690 Fragaria vesca HOM05D003094 ORTHO05D003482 6.3e-08 61.6 119 40.3
FAN18G0043 Fragaria x ananassa HOM05D003094 ORTHO05D003482 6.3e-08 61.6 119 40.3
Gorai.003G056600 Gossypium raimondii HOM05D003094 ORTHO05D003482 8.3e-08 61.2 63 50.8
Gorai.013G169300 Gossypium raimondii HOM05D003094 ORTHO05D003482 8.3e-08 61.2 128 35.2
ClCG06G014600 Citrullus lanatus HOM05D003094 ORTHO05D003482 1.1e-07 60.8 136 34.6
Actinidia35101 Actinidia chinensis HOM05D003094 ORTHO05D003482 1.4e-07 60.5 97 39.2
Hund11930 Selenicereus undatus HOM05D003094 ORTHO05D003482 1.8e-07 60.1 118 36.4
EL10Ac7g16627 Beta vulgaris HOM05D003094 ORTHO05D003482 2.4e-07 59.7 129 35.7
CSS0029576 Camellia sinensis var. sinensis HOM05D003094 ORTHO05D003482 2.4e-07 59.7 69 43.5
FAN08G1507 Fragaria x ananassa HOM05D003094 ORTHO05D003482 2.4e-07 59.7 115 40.0
Sopen03g038050 Solanum pennellii HOM05D003094 ORTHO05D003482 2.4e-07 59.7 93 37.6
EL10Ac4g10181 Beta vulgaris HOM05D003094 ORTHO05D003482 3.1e-07 59.3 129 35.7
FAN13G1164 Fragaria x ananassa HOM05D003094 ORTHO05D003482 3.1e-07 59.3 116 39.7
Ciclev10020325m.g Citrus clementina HOM05D003094 ORTHO05D003482 4.1e-07 58.9 53 50.9
MELO3C017325.2 Cucumis melo HOM05D003094 ORTHO05D003482 4.1e-07 58.9 140 32.9
Nitab4.5_0004028g0060 Nicotiana tabacum HOM05D003094 ORTHO05D003482 4.1e-07 58.9 74 45.9
CANSAT80G1577 Cannabis sativa HOM05D003094 ORTHO05D003482 5.4e-07 58.5 128 35.9
Manes.01G015200 Manihot esculenta HOM05D003094 ORTHO05D003482 5.4e-07 58.5 133 33.1
CAN.G1129.14 Capsicum annuum HOM05D003094 ORTHO05D003482 7.0e-07 58.2 82 43.9
Thecc.07G091700 Theobroma cacao HOM05D003094 ORTHO05D003482 7.0e-07 58.2 131 35.9
AUR62042498 Chenopodium quinoa HOM05D003094 ORTHO05D003482 9.2e-07 57.8 52 53.8
Rhsim12G0141600 Rhododendron simsii HOM05D003094 ORTHO05D003482 9.2e-07 57.8 45 64.4
TWI81G0976 Tripterygium wilfordii HOM05D003094 ORTHO05D003482 9.2e-07 57.8 102 35.3
Atru.chr9.905 Acer truncatum HOM05D003094 ORTHO05D003482 1.2e-06 57.4 142 33.1
Ca_11586_v3 Cicer arietinum L. HOM05D003094 ORTHO05D003482 1.2e-06 57.4 122 33.6
Sed0019035 Sechium edule HOM05D003094 ORTHO05D003482 1.2e-06 57.4 50 52.0
Sc04g0003380 Simmondsia chinensis HOM05D003094 ORTHO05D003482 1.2e-06 57.4 59 47.5
MD06G1220500 Malus domestica HOM05D003094 ORTHO05D003482 1.6e-06 57.0 67 44.8
Actinidia19943 Actinidia chinensis HOM05D003094 ORTHO05D003482 2.0e-06 56.6 64 46.9
PGR044G0078 Punica granatum HOM05D003094 ORTHO05D003482 2.0e-06 56.6 59 45.8
VMungo0251G1973 Vigna mungo HOM05D003094 ORTHO05D003482 2.0e-06 56.6 64 42.2
GSVIVG01008338001 Vitis vinifera HOM05D003094 ORTHO05D003482 2.0e-06 56.6 59 44.1
AUR62040348 Chenopodium quinoa HOM05D003094 ORTHO05D003482 2.7e-06 56.2 52 51.9
ClCG04G010900 Citrullus lanatus HOM05D003094 ORTHO05D003482 2.7e-06 56.2 75 40.0
ECA233G5083 Erigeron canadensis HOM05D003094 ORTHO05D003482 2.7e-06 56.2 84 38.1
TAR374G0733 Trochodendron aralioides HOM05D003094 ORTHO05D003482 2.7e-06 56.2 93 41.9
AL3G31470 Arabidopsis lyrata HOM05D003094 ORTHO05D003482 3.5e-06 55.8 128 33.6
Eucgr.K02236 Eucalyptus grandis HOM05D003094 ORTHO05D003482 3.5e-06 55.8 53 49.1
Phvul.002G182800 Phaseolus vulgaris HOM05D003094 ORTHO05D003482 3.5e-06 55.8 64 40.6
TPR.G35824 Trifolium pratense HOM05D003094 ORTHO05D003482 3.5e-06 55.8 118 30.5
MBI16_g44830_MAGBIO Magnolia biondii HOM05D003094 ORTHO05D003482 4.5e-06 55.5 54 46.3
THA.LOC104812151 Tarenaya hassleriana HOM05D003094 ORTHO05D003482 4.5e-06 55.5 56 48.2
Cfa019732 Carpinus fangiana HOM05D003094 ORTHO05D003482 5.9e-06 55.1 58 48.3
MD14G1229900 Malus domestica HOM05D003094 ORTHO05D003482 5.9e-06 55.1 67 43.3
Nitab4.5_0008678g0040 Nicotiana tabacum HOM05D003094 ORTHO05D003482 5.9e-06 55.1 65 47.7
Sed0020442 Sechium edule HOM05D003094 ORTHO05D003482 5.9e-06 55.1 52 51.9
Hund02353 Selenicereus undatus HOM05D003094 ORTHO05D003482 5.9e-06 55.1 106 38.7
TAR374G0309 Trochodendron aralioides HOM05D003094 ORTHO05D003482 5.9e-06 55.1 101 40.6
ATR0757G079 Amborella trichopoda HOM05D003094 ORTHO05D003482 7.7e-06 54.7 51 52.9
HanXRQChr17g0558961 Helianthus annuus HOM05D003094 ORTHO05D003482 7.7e-06 54.7 99 34.3
RcHm_v2.0_Chr2g0128201 Rosa chinensis HOM05D003094 ORTHO05D003482 7.7e-06 54.7 125 36.0


User provided reference genes

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