Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_29672_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 8.1e-169 597.0 312 100.0
Ca_21946_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 4.9e-158 561.2 290 100.0
TPR.G37539 Trifolium pratense HOM05D004617 ORTHO05D005531 7.2e-101 371.3 291 71.8
Medtr4g105330 Medicago truncatula HOM05D004617 ORTHO05D005531 4.7e-92 342.0 290 67.2
Lj4g0013782 Lotus japonicus HOM05D004617 ORTHO05D005531 1.8e-91 340.1 293 65.9
Glyma.05G040000 Glycine max HOM05D004617 ORTHO05D005531 2.9e-86 322.8 293 64.5
Psat4g059160 Pisum sativum HOM05D004617 ORTHO05D005531 3.2e-85 319.3 293 62.5
Phvul.003G203200 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 5.5e-85 318.5 293 63.1
VMungo1215G2409 Vigna mungo HOM05D004617 ORTHO05D005531 1.4e-80 303.9 293 60.4
arahy.Tifrunner.gnm1.ann1.B97T9I Arachis hypogaea HOM05D004617 ORTHO05D005531 8.9e-75 284.6 288 58.3
arahy.Tifrunner.gnm1.ann1.P4R84V Arachis hypogaea HOM05D004617 ORTHO05D005531 1.7e-73 280.4 288 58.0
Haze_07552 Corylus avellana HOM05D004617 ORTHO05D005531 6.4e-73 278.5 293 55.3
Lalb_Chr23g0273321 Lupinus albus HOM05D004617 ORTHO05D005531 2.1e-68 263.5 289 52.6
Phvul.009G175700 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 6.2e-68 261.9 282 54.6
VMungo1309G0654 Vigna mungo HOM05D004617 ORTHO05D005531 2.3e-67 260.0 283 55.1
Psat4g095560 Pisum sativum HOM05D004617 ORTHO05D005531 1.3e-65 254.2 316 51.9
TAR629G3522 Trochodendron aralioides HOM05D004617 ORTHO05D005531 2.7e-63 246.5 293 49.8
QL10p008526 Quercus lobata HOM05D004617 ORTHO05D005531 1.0e-62 244.6 295 51.5
QL10p008663 Quercus lobata HOM05D004617 ORTHO05D005531 1.0e-62 244.6 294 51.7
CiPaw.12G028900 Carya illinoinensis HOM05D004617 ORTHO05D005531 5.0e-62 242.3 292 50.0
CSS0042906 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 3.3e-61 239.6 279 48.7
CiPaw.11G022700 Carya illinoinensis HOM05D004617 ORTHO05D005531 3.3e-61 239.6 290 49.7
COL.COLO4_30121 Corchorus olitorius HOM05D004617 ORTHO05D005531 3.3e-61 239.6 292 48.3
MD06G1170100 Malus domestica HOM05D004617 ORTHO05D005531 5.6e-61 238.8 292 50.0
Thecc.03G024100 Theobroma cacao HOM05D004617 ORTHO05D005531 9.5e-61 238.0 278 49.6
Dinv20620 Davidia involucrata HOM05D004617 ORTHO05D005531 1.6e-60 237.3 279 49.8
Dinv38556 Davidia involucrata HOM05D004617 ORTHO05D005531 2.1e-60 236.9 280 49.3
CSS0013084 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 1.1e-59 234.6 279 47.7
Ciclev10020950m.g Citrus clementina HOM05D004617 ORTHO05D005531 2.3e-59 233.4 289 47.1
Duzib205G1820 Durio zibethinus HOM05D004617 ORTHO05D005531 4.4e-58 229.2 292 47.6
Atru.chr9.2539 Acer truncatum HOM05D004617 ORTHO05D005531 5.8e-58 228.8 290 45.5
Gorai.008G294000 Gossypium raimondii HOM05D004617 ORTHO05D005531 5.8e-58 228.8 292 46.6
GSVIVG01007687001 Vitis vinifera HOM05D004617 ORTHO05D005531 1.3e-57 227.6 282 47.2
Rhsim12G0166500 Rhododendron simsii HOM05D004617 ORTHO05D005531 2.2e-57 226.9 292 45.5
Gohir.D12G273600 Gossypium hirsutum HOM05D004617 ORTHO05D005531 4.9e-57 225.7 292 45.9
Gohir.A12G272900 Gossypium hirsutum HOM05D004617 ORTHO05D005531 1.1e-56 224.6 292 46.2
Gohir.A09G172500 Gossypium hirsutum HOM05D004617 ORTHO05D005531 1.4e-56 224.2 292 45.9
Sed0022669 Sechium edule HOM05D004617 ORTHO05D005531 1.9e-56 223.8 303 43.6
MD14G1175700 Malus domestica HOM05D004617 ORTHO05D005531 2.4e-56 223.4 292 47.3
Nn4g22667 Nelumbo nucifera HOM05D004617 ORTHO05D005531 4.1e-56 222.6 281 46.6
Manes.06G108000 Manihot esculenta HOM05D004617 ORTHO05D005531 5.4e-56 222.2 292 45.5
MSTRG.23154 Avicennia marina HOM05D004617 ORTHO05D005531 1.2e-55 221.1 278 46.4
Gorai.006G189800 Gossypium raimondii HOM05D004617 ORTHO05D005531 1.6e-55 220.7 292 46.2
TWI39G0523 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 1.6e-55 220.7 292 45.9
MELO3C026277.2 Cucumis melo HOM05D004617 ORTHO05D005531 3.5e-55 219.5 279 47.0
CANSAT80G0933 Cannabis sativa HOM05D004617 ORTHO05D005531 1.0e-54 218.0 289 45.7
Sabra15G0104900 Salix brachista HOM05D004617 ORTHO05D005531 1.3e-54 217.6 285 44.6
CsaV3_1G001290 Cucumis sativus L. HOM05D004617 ORTHO05D005531 8.6e-54 214.9 277 45.5
Lsat_1_v5_gn_5_15901 Lactuca sativa HOM05D004617 ORTHO05D005531 5.6e-53 212.2 263 45.2
Nitab4.5_0001284g0070 Nicotiana tabacum HOM05D004617 ORTHO05D005531 7.3e-53 211.8 280 44.3
PGR044G1277 Punica granatum HOM05D004617 ORTHO05D005531 7.3e-53 211.8 289 43.6
Sc04g0001670 Simmondsia chinensis HOM05D004617 ORTHO05D005531 7.3e-53 211.8 278 43.5
FvH4_5g05820 Fragaria vesca HOM05D004617 ORTHO05D005531 9.5e-53 211.5 284 44.0
CAN.G338.4 Capsicum annuum HOM05D004617 ORTHO05D005531 1.2e-52 211.1 274 43.8
RcHm_v2.0_Chr7g0193001 Rosa chinensis HOM05D004617 ORTHO05D005531 1.2e-52 211.1 286 44.1
TWI23G0363 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 1.2e-52 211.1 278 45.7
Nitab4.5_0011992g0040 Nicotiana tabacum HOM05D004617 ORTHO05D005531 1.6e-52 210.7 282 42.9
Sopen03g031610 Solanum pennellii HOM05D004617 ORTHO05D005531 1.6e-52 210.7 279 43.4
FAN18G1615 Fragaria x ananassa HOM05D004617 ORTHO05D005531 4.7e-52 209.1 241 48.5
Potri.012G088000 Populus trichocarpa HOM05D004617 ORTHO05D005531 6.2e-52 208.8 282 42.9
Hund09456 Selenicereus undatus HOM05D004617 ORTHO05D005531 6.2e-52 208.8 264 44.7
Solyc03g112550.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 8.1e-52 208.4 279 43.0
Potri.015G080900 Populus trichocarpa HOM05D004617 ORTHO05D005531 1.1e-51 208.0 287 43.6
FAN08G0972 Fragaria x ananassa HOM05D004617 ORTHO05D005531 1.4e-51 207.6 288 44.4
PGSC0003DMG400018106 Solanum tuberosum HOM05D004617 ORTHO05D005531 1.4e-51 207.6 295 42.7
ClCG06G017200 Citrullus lanatus HOM05D004617 ORTHO05D005531 1.8e-51 207.2 272 44.1
Cc04_g12560 Coffea canephora HOM05D004617 ORTHO05D005531 2.3e-51 206.8 279 43.4
Cpa.g.sc153.19 Carica papaya HOM05D004617 ORTHO05D005531 3.1e-51 206.5 282 43.6
PSO478G3702 Papaver somniferum HOM05D004617 ORTHO05D005531 5.2e-51 205.7 274 43.1
FAN05G0977 Fragaria x ananassa HOM05D004617 ORTHO05D005531 8.9e-51 204.9 289 42.9
Oeu001681.1 Olea europaea HOM05D004617 ORTHO05D005531 1.2e-50 204.5 253 48.2
HanXRQChr05g0154591 Helianthus annuus HOM05D004617 ORTHO05D005531 1.5e-50 204.1 264 43.2
vmacro16629 Vaccinium macrocarpon HOM05D004617 ORTHO05D005531 2.0e-50 203.8 316 41.1
Eucgr.K02817 Eucalyptus grandis HOM05D004617 ORTHO05D005531 3.4e-50 203.0 318 40.3
FAN13G0632 Fragaria x ananassa HOM05D004617 ORTHO05D005531 3.4e-50 203.0 279 43.7
Potri.T124408 Populus trichocarpa HOM05D004617 ORTHO05D005531 9.9e-50 201.4 287 42.5
MSTRG.11480 Avicennia marina HOM05D004617 ORTHO05D005531 2.2e-49 200.3 259 44.8
PSO017G2275 Papaver somniferum HOM05D004617 ORTHO05D005531 6.4e-49 198.7 274 42.0
Aqoxy3G01097 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 1.1e-48 198.0 261 44.4
BcaB02g10666 Brassica carinata HOM05D004617 ORTHO05D005531 1.9e-48 197.2 275 42.2
FvH4_6g24101 Fragaria vesca HOM05D004617 ORTHO05D005531 1.9e-48 197.2 289 42.2
Migut.O00131 Erythranthe guttata HOM05D004617 ORTHO05D005531 2.4e-48 196.8 261 43.3
PGSC0003DMG400027080 Solanum tuberosum HOM05D004617 ORTHO05D005531 2.4e-48 196.8 280 42.5
CAN.G993.37 Capsicum annuum HOM05D004617 ORTHO05D005531 4.1e-48 196.1 284 41.2
Sc12g0005180 Simmondsia chinensis HOM05D004617 ORTHO05D005531 4.1e-48 196.1 298 40.6
THA.LOC104818211 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 5.4e-48 195.7 288 41.0
DCAR_021575 Daucus carota HOM05D004617 ORTHO05D005531 9.2e-48 194.9 274 43.1
Sopen06g027890 Solanum pennellii HOM05D004617 ORTHO05D005531 9.2e-48 194.9 280 42.5
C03p66610 Brassica napus HOM05D004617 ORTHO05D005531 3.5e-47 193.0 275 41.8
Solyc06g071600.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 3.5e-47 193.0 280 42.1
BcaC01g02324 Brassica carinata HOM05D004617 ORTHO05D005531 4.6e-47 192.6 275 41.8
BolC3t18931H Brassica oleracea HOM05D004617 ORTHO05D005531 4.6e-47 192.6 275 41.8
Aa31LG4G16830 Aethionema arabicum HOM05D004617 ORTHO05D005531 3.0e-46 189.9 284 40.5
Carub.0005s1437 Capsella rubella HOM05D004617 ORTHO05D005531 3.0e-46 189.9 293 41.0
THA.LOC104798968 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 3.0e-46 189.9 289 41.9
A06p27500 Brassica napus HOM05D004617 ORTHO05D005531 5.1e-46 189.1 275 40.7
BraA06t25690Z Brassica rapa HOM05D004617 ORTHO05D005531 5.1e-46 189.1 275 40.7
AL5G27600 Arabidopsis lyrata HOM05D004617 ORTHO05D005531 6.6e-46 188.7 293 41.0
ECA246G2887 Erigeron canadensis HOM05D004617 ORTHO05D005531 1.9e-45 187.2 266 42.1
CARHR156970 Cardamine hirsuta HOM05D004617 ORTHO05D005531 2.5e-45 186.8 295 41.0
Sp5g13810 Schrenkiella parvula HOM05D004617 ORTHO05D005531 2.5e-45 186.8 274 41.6
SGA_v2.0_scaffold90G27877 Striga asiatica HOM05D004617 ORTHO05D005531 2.5e-45 186.8 220 45.0
Prupe.5G169600 Prunus persica HOM05D004617 ORTHO05D005531 4.3e-45 186.0 292 43.2
Thhalv10010559m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 7.3e-45 185.3 279 39.8
Hma1.2p1_0046F.1_g026830 Hydrangea macrophylla HOM05D004617 ORTHO05D005531 9.6e-45 184.9 300 39.3
Sabra12G0062800 Salix brachista HOM05D004617 ORTHO05D005531 9.6e-45 184.9 314 38.5
EL10Ac5g10692 Beta vulgaris HOM05D004617 ORTHO05D005531 8.1e-44 181.8 236 44.5
AT3G48210 Arabidopsis thaliana HOM05D004617 ORTHO05D005531 1.4e-43 181.0 293 40.6
Peaxi162Scf00089g01634 Petunia axillaris HOM05D004617 ORTHO05D005531 3.1e-43 179.9 288 39.6
AUR62029851 Chenopodium quinoa HOM05D004617 ORTHO05D005531 5.2e-43 179.1 273 41.0
Thhalv10010553m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 2.0e-42 177.2 282 39.0
MBI16_g23858_MAGBIO Magnolia biondii HOM05D004617 ORTHO05D005531 7.6e-42 175.3 273 40.7
Lj9A445T80 Lonicera japonica HOM05D004617 ORTHO05D005531 1.3e-41 174.5 345 36.2
Actinidia19118 Actinidia chinensis HOM05D004617 ORTHO05D005531 4.9e-41 172.6 213 45.1
Gohir.D09G168200 Gossypium hirsutum HOM05D004617 ORTHO05D005531 1.6e-39 167.5 292 39.7
Lj5A127T55 Lonicera japonica HOM05D004617 ORTHO05D005531 2.1e-39 167.2 229 43.2
AUR62008173 Chenopodium quinoa HOM05D004617 ORTHO05D005531 3.5e-39 166.4 256 39.5
SalBow5G2990 Salvia bowleyana HOM05D004617 ORTHO05D005531 4.6e-39 166.0 228 41.2
SalBow5G0770 Salvia bowleyana HOM05D004617 ORTHO05D005531 6.0e-39 165.6 228 41.2
AUR62028750 Chenopodium quinoa HOM05D004617 ORTHO05D005531 2.3e-38 163.7 262 39.3
Nitab4.5_0003918g0030 Nicotiana tabacum HOM05D004617 ORTHO05D005531 1.1e-35 154.8 273 37.0
DCAR_004467 Daucus carota HOM05D004617 ORTHO05D005531 9.9e-34 148.3 218 40.4
TAR371G0263 Trochodendron aralioides HOM05D004617 ORTHO05D005531 1.3e-33 147.9 198 42.9
HPP92_011588 Vanilla planifolia HOM05D004617 ORTHO05D005531 3.2e-32 143.3 277 36.1
unitig_0.g2533 Utricularia gibba HOM05D004617 ORTHO05D005531 1.2e-31 141.4 199 40.2
CDE05G2613 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 6.0e-31 139.0 218 39.4
Cpa.g.sc153.20 Carica papaya HOM05D004617 ORTHO05D005531 7.9e-31 138.7 144 50.7
Glyma.04G186200 Glycine max HOM05D004617 ORTHO05D005531 1.3e-30 137.9 168 48.8
FAN02G3554 Fragaria x ananassa HOM05D004617 ORTHO05D005531 2.3e-30 137.1 160 45.0
arahy.Tifrunner.gnm1.ann1.H09BLY Arachis hypogaea HOM05D004617 ORTHO05D005531 2.0e-26 124.0 119 55.5
CDE02G4133 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 5.8e-26 122.5 207 39.1
ATR1152G034 Amborella trichopoda HOM05D004617 ORTHO05D005531 2.2e-25 120.6 253 30.8
Os05g0110700 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 3.8e-25 119.8 277 31.0
SEGI_25965 Sequoiadendron giganteum HOM05D004617 ORTHO05D005531 6.4e-25 119.0 232 31.9
Zm00001eb362200 Zea mays HOM05D004617 ORTHO05D005531 3.2e-24 116.7 262 30.5
Glyma.06G179933 Glycine max HOM05D004617 ORTHO05D005531 4.2e-24 116.3 156 46.8
Zm00001eb139780 Zea mays HOM05D004617 ORTHO05D005531 4.2e-24 116.3 251 30.7
Os01g0973200 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 7.1e-24 115.5 278 28.8
Aqoxy5G01948 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 1.6e-20 104.4 129 45.7
BcaC07g39309 Brassica carinata HOM05D004617 ORTHO05D005531 1.4e-19 101.3 210 34.8
A06p19470 Brassica napus HOM05D004617 ORTHO05D005531 1.2e-18 98.2 238 32.4
BraA06t25026Z Brassica rapa HOM05D004617 ORTHO05D005531 2.0e-18 97.4 238 31.9
Glyma.17G086900 Glycine max HOM05D004617 ORTHO05D005531 1.3e-17 94.7 67 73.1
C08p23230 Brassica napus HOM05D004617 ORTHO05D005531 6.5e-17 92.4 204 31.9
Zm00001eb355840 Zea mays HOM05D004617 ORTHO05D005531 8.4e-17 92.0 240 29.2
arahy.Tifrunner.gnm1.ann1.8UC028 Arachis hypogaea HOM05D004617 ORTHO05D005531 1.9e-16 90.9 113 54.0
vmacro20892 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 4.8e-12 76.3 70 54.3
Mapoly0029s0121 Marchantia polymorpha HOM05D004617 ORTHO05D005531 1.8e-11 74.3 105 35.2
Pp3c8_1270 Physcomitrium patens HOM05D004617 ORTHO05D005531 2.2e-09 67.4 99 31.3
SMO200G0114 Selaginella moellendorffii HOM05D004617 ORTHO05D005531 6.5e-09 65.9 107 33.6
Atru.chr9.2524 Acer truncatum HOM05D004617 ORTHO05D005531 5.5e-08 62.8 96 42.7
Pp3c3_37370 Physcomitrium patens HOM05D004617 ORTHO05D005531 7.9e-07 58.9 86 31.4
PRCOL_00005442 Prasinoderma coloniale HOM05D004617 ORTHO05D005531 6.7e-06 55.8 92 33.7


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