Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_29614_v3 Cicer arietinum L. HOM05D000461 ORTHO05D009042 1.2e-143 513.1 252 100.0
Psat5g246400 Pisum sativum HOM05D000461 ORTHO05D009042 1.1e-107 393.7 249 81.1
Medtr2g080290 Medicago truncatula HOM05D000461 ORTHO05D009042 3.5e-106 388.7 249 79.1
Glyma.12G220000 Glycine max HOM05D000461 ORTHO05D009042 2.0e-101 372.9 248 77.0
Lalb_Chr01g0017011 Lupinus albus HOM05D000461 ORTHO05D009042 6.4e-100 367.9 250 74.4
Phvul.005G086500 Phaseolus vulgaris HOM05D000461 ORTHO05D009042 1.1e-99 367.1 254 73.6
Glyma.13G281300 Glycine max HOM05D000461 ORTHO05D009042 7.1e-99 364.4 249 75.5
TPR.G32851 Trifolium pratense HOM05D000461 ORTHO05D009042 9.3e-99 364.0 253 73.9
Lalb_Chr25g0286691 Lupinus albus HOM05D000461 ORTHO05D009042 9.6e-96 354.0 249 72.7
Lj3g0027305 Lotus japonicus HOM05D000461 ORTHO05D009042 2.7e-90 335.9 261 72.4
Cfa020516 Carpinus fangiana HOM05D000461 ORTHO05D009768 4.3e-88 328.6 222 73.9
QL93p2023_0091 Quercus lobata HOM05D000461 ORTHO05D009042 1.4e-83 313.5 251 63.7
QL08p018706 Quercus lobata HOM05D000461 ORTHO05D009042 1.9e-83 313.2 251 63.7
CiPaw.11G175500 Carya illinoinensis HOM05D000461 ORTHO05D009042 1.0e-81 307.4 249 63.1
arahy.Tifrunner.gnm1.ann1.20QRXD Arachis hypogaea HOM05D000461 ORTHO05D009042 2.3e-81 306.2 244 67.6
arahy.Tifrunner.gnm1.ann1.IDBP1F Arachis hypogaea HOM05D000461 ORTHO05D009042 4.3e-80 302.0 245 67.8
Prupe.4G189000 Prunus persica HOM05D000461 ORTHO05D009042 2.4e-78 296.2 251 61.0
CSS0025788 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 1.3e-76 290.4 253 59.3
Dinv08335 Davidia involucrata HOM05D000461 ORTHO05D009042 4.6e-74 282.0 210 67.1
RcHm_v2.0_Chr5g0035191 Rosa chinensis HOM05D000461 ORTHO05D009042 3.3e-72 275.8 251 58.2
CANSAT11G1238 Cannabis sativa HOM05D000461 ORTHO05D009042 7.4e-72 274.6 264 57.6
Dinv22369 Davidia involucrata HOM05D000461 ORTHO05D009042 2.8e-71 272.7 258 58.9
Manes.03G116000 Manihot esculenta HOM05D000461 ORTHO05D009042 1.1e-70 270.8 261 58.2
TWI39G0508 Tripterygium wilfordii HOM05D000461 ORTHO05D009042 1.8e-70 270.0 252 57.9
Solyc07g063530.3 Solanum lycopersicum HOM05D000461 ORTHO05D009042 9.1e-70 267.7 263 55.9
Hma1.2p1_1003F.1_g246730 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 7.7e-69 264.6 217 62.7
Potri.001G405800 Populus trichocarpa HOM05D000461 ORTHO05D009042 1.0e-68 264.2 257 55.3
MD11G1238100 Malus domestica HOM05D000461 ORTHO05D009042 2.9e-68 262.7 258 56.2
FAN21G1502 Fragaria x ananassa HOM05D000461 ORTHO05D009042 1.6e-66 256.9 251 53.0
Sabra16G0269500 Salix brachista HOM05D000461 ORTHO05D009042 2.1e-66 256.5 283 50.9
ClCG10G006570 Citrullus lanatus HOM05D000461 ORTHO05D009042 4.7e-66 255.4 241 56.4
Eucgr.F03352 Eucalyptus grandis HOM05D000461 ORTHO05D009042 4.7e-66 255.4 208 61.5
Nitab4.5_0000297g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 6.1e-66 255.0 272 53.7
FAN11G0265 Fragaria x ananassa HOM05D000461 ORTHO05D009042 7.9e-66 254.6 258 54.3
Rhsim04G0018200 Rhododendron simsii HOM05D000461 ORTHO05D009042 7.9e-66 254.6 222 58.1
Sabra16G0267700 Salix brachista HOM05D000461 ORTHO05D009042 1.4e-65 253.8 285 50.5
Nn1g03924 Nelumbo nucifera HOM05D000461 ORTHO05D009042 3.0e-65 252.7 211 62.6
Ah.04g164980 Amaranthus hybridus HOM05D000461 ORTHO05D009042 2.0e-64 250.0 214 57.9
Ciclev10009303m.g Citrus clementina HOM05D000461 ORTHO05D009042 2.0e-64 250.0 260 54.6
FAN16G2536 Fragaria x ananassa HOM05D000461 ORTHO05D009042 2.6e-64 249.6 256 52.7
COL.COLO4_09469 Corchorus olitorius HOM05D000461 ORTHO05D009768 7.4e-64 248.1 206 62.6
Cpa.g.sc80.106 Carica papaya HOM05D000461 ORTHO05D009042 9.7e-64 247.7 258 51.2
Duzib213G0849 Durio zibethinus HOM05D000461 ORTHO05D009042 1.3e-63 247.3 260 52.7
CsaV3_3G006020 Cucumis sativus L. HOM05D000461 ORTHO05D009042 4.8e-63 245.4 242 55.4
Atru.chr2.2831 Acer truncatum HOM05D000461 ORTHO05D009042 6.3e-63 245.0 257 51.8
Sed0008890 Sechium edule HOM05D000461 ORTHO05D009042 6.3e-63 245.0 234 55.6
MD03G1219800 Malus domestica HOM05D000461 ORTHO05D009042 1.8e-62 243.4 257 52.1
Thecc.07G072900 Theobroma cacao HOM05D000461 ORTHO05D009042 1.8e-62 243.4 257 52.5
MSTRG.15210 Avicennia marina HOM05D000461 ORTHO05D009042 5.3e-62 241.9 225 59.1
PGR031G2091 Punica granatum HOM05D000461 ORTHO05D009042 5.3e-62 241.9 181 66.9
TAR626G1568 Trochodendron aralioides HOM05D000461 ORTHO05D009042 2.0e-61 240.0 254 54.3
Cc05_g12620 Coffea canephora HOM05D000461 ORTHO05D009042 5.9e-61 238.4 191 63.9
Nitab4.5_0002565g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 2.9e-60 236.1 247 53.8
CDE05G1014 Ceratophyllum demersum HOM05D000461 ORTHO05D009042 3.8e-60 235.7 227 56.4
Sopen07g031710 Solanum pennellii HOM05D000461 ORTHO05D009042 3.8e-60 235.7 170 67.6
Migut.M00872 Erythranthe guttata HOM05D000461 ORTHO05D009042 1.2e-58 230.7 263 52.5
Thhalv10026109m.g Eutrema salsugineum HOM05D000461 ORTHO05D009042 2.3e-57 226.5 195 58.5
Gohir.A01G068300 Gossypium hirsutum HOM05D000461 ORTHO05D009042 5.2e-57 225.3 261 47.9
BcaC06g32696 Brassica carinata HOM05D000461 ORTHO05D009042 6.7e-57 224.9 237 54.0
GSVIVG01014422001 Vitis vinifera HOM05D000461 ORTHO05D009042 6.7e-57 224.9 148 73.0
Carub.0007s1348 Capsella rubella HOM05D000461 ORTHO05D009042 1.1e-56 224.2 195 59.0
BolC7t46022H Brassica oleracea HOM05D000461 ORTHO05D009042 1.5e-56 223.8 237 53.6
Sc03g0009630 Simmondsia chinensis HOM05D000461 ORTHO05D009042 1.5e-56 223.8 200 56.5
THA.LOC104799911 Tarenaya hassleriana HOM05D000461 ORTHO05D009042 2.0e-56 223.4 182 58.8
Actinidia18752 Actinidia chinensis HOM05D000461 ORTHO05D009042 7.4e-56 221.5 230 53.0
Sp7g25320 Schrenkiella parvula HOM05D000461 ORTHO05D009042 7.4e-56 221.5 195 57.4
C07p55420 Brassica napus HOM05D000461 ORTHO05D009042 9.7e-56 221.1 237 53.2
Gorai.002G075700 Gossypium raimondii HOM05D000461 ORTHO05D009042 2.8e-55 219.5 267 46.8
A03p57230 Brassica napus HOM05D000461 ORTHO05D009042 3.7e-55 219.2 200 57.5
BraA03t14789Z Brassica rapa HOM05D000461 ORTHO05D009042 3.7e-55 219.2 200 57.5
CARHR235060 Cardamine hirsuta HOM05D000461 ORTHO05D009042 3.7e-55 219.2 182 60.4
Gohir.D01G055600 Gossypium hirsutum HOM05D000461 ORTHO05D009042 3.7e-55 219.2 264 46.2
VMungo1080G0679 Vigna mungo HOM05D000461 ORTHO05D009042 1.1e-54 217.6 185 63.2
Lsat_1_v5_gn_7_106400 Lactuca sativa HOM05D000461 ORTHO05D009042 3.1e-54 216.1 180 58.9
AT4G27390 Arabidopsis thaliana HOM05D000461 ORTHO05D009042 1.2e-53 214.2 244 51.2
SGA_v2.0_scaffold73G24312 Striga asiatica HOM05D000461 ORTHO05D009042 2.0e-53 213.4 258 50.8
DCAR_013076 Daucus carota HOM05D000461 ORTHO05D009768 1.0e-52 211.1 168 61.3
Actinidia25643 Actinidia chinensis HOM05D000461 ORTHO05D009042 1.3e-52 210.7 187 55.6
Aqoxy1G02771 Aquilegia oxysepala HOM05D000461 ORTHO05D009042 5.0e-52 208.8 218 52.3
AL7G25410 Arabidopsis lyrata HOM05D000461 ORTHO05D009042 5.0e-52 208.8 242 51.7
Haze_09518 Corylus avellana HOM05D000461 ORTHO05D009042 5.0e-52 208.8 278 48.2
Peaxi162Scf01216g00058 Petunia axillaris HOM05D000461 ORTHO05D009042 6.5e-52 208.4 234 49.6
PSO210G3087 Papaver somniferum HOM05D000461 ORTHO05D009042 5.5e-51 205.3 258 46.5
Aa31LG5G10130 Aethionema arabicum HOM05D000461 ORTHO05D009042 2.7e-50 203.0 183 55.7
PSO832G2223 Papaver somniferum HOM05D000461 ORTHO05D009042 8.0e-50 201.4 208 51.0
FvH4_3g20860 Fragaria vesca HOM05D000461 ORTHO05D009042 2.0e-48 196.8 205 51.7
Oeu005436.1 Olea europaea HOM05D000461 ORTHO05D009042 3.4e-48 196.1 125 73.6
EL10Ac4g08079 Beta vulgaris HOM05D000461 ORTHO05D009042 2.2e-47 193.4 313 38.7
HanXRQChr11g0330871 Helianthus annuus HOM05D000461 ORTHO05D009042 2.8e-47 193.0 175 57.7
Actinidia35273 Actinidia chinensis HOM05D000461 ORTHO05D009042 4.8e-47 192.2 254 46.9
vmacro09553 Vaccinium macrocarpon HOM05D000461 ORTHO05D009042 7.0e-46 188.3 357 38.1
ECA236G1699 Erigeron canadensis HOM05D003383 ORTHO05D003890 1.3e-44 184.1 141 60.3
AUR62029322 Chenopodium quinoa HOM05D000461 ORTHO05D009042 5.5e-43 178.7 216 48.1
MELO3C016549.2 Cucumis melo HOM05D000461 ORTHO05D009042 1.2e-42 177.6 160 55.0
Hund28424 Selenicereus undatus HOM05D000461 ORTHO05D009042 2.0e-40 170.2 209 50.2
Hund28429 Selenicereus undatus HOM05D000461 ORTHO05D009042 2.0e-40 170.2 209 50.2
Zm00001eb352790 Zea mays HOM05D000461 ORTHO05D009042 2.6e-40 169.9 223 45.7
AUR62015609 Chenopodium quinoa HOM05D000461 ORTHO05D009042 3.4e-40 169.5 232 47.4
Os05g0502500 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D009042 1.8e-38 163.7 203 44.8
HPP92_001809 Vanilla planifolia HOM05D000461 ORTHO05D009042 4.5e-37 159.1 146 52.1
CSS0035681 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 7.7e-37 158.3 172 52.3
RcHm_v2.0_Chr5g0035211 Rosa chinensis HOM05D000461 ORTHO05D009042 1.7e-36 157.1 109 67.0
PGSC0003DMG400019287 Solanum tuberosum HOM05D000461 ORTHO05D009042 5.0e-36 155.6 105 69.5
Mapoly0059s0039 Marchantia polymorpha HOM05D000461 ORTHO05D009042 7.2e-35 151.8 194 41.8
SMO347G0332 Selaginella moellendorffii HOM05D000461 ORTHO05D009042 1.4e-30 137.5 169 42.0
CBR_g3118 Chara braunii HOM05D000461 ORTHO05D009042 1.1e-27 127.9 150 43.3
Manes.15G162800 Manihot esculenta HOM05D000461 ORTHO05D009042 9.5e-27 124.8 86 68.6
Pp3c5_7600 Physcomitrium patens HOM05D000461 ORTHO05D009042 1.2e-26 124.4 223 35.4
Hma1.2p1_1003F.1_g246740 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 1.6e-26 124.0 82 69.5
ATR0693G207 Amborella trichopoda HOM05D000461 ORTHO05D009042 1.7e-23 114.0 92 65.2
unitig_85.g27405 Utricularia gibba HOM05D000461 ORTHO05D009042 1.2e-10 71.2 197 31.5
FAN25G1192 Fragaria x ananassa HOM05D000461 ORTHO05D009042 1.2e-08 64.7 54 64.8
AagrBONN_evm.TU.Sc2ySwM_117.739 Anthoceros agrestis HOM05D000461 ORTHO05D009042 3.7e-07 59.7 77 41.6
MELO3C030131.2 Cucumis melo HOM05D004229 ORTHO05D025211 3.2e-06 56.6 37 64.9


User provided reference genes

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