Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10573_v3 Cicer arietinum L. HOM05D003701 ORTHO05D004771 6.0e-247 857.1 436 100.0
Ca_29596_v3 Cicer arietinum L. HOM05D003701 ORTHO05D004771 6.0e-247 857.1 436 100.0
TPR.G1904 Trifolium pratense HOM05D003701 ORTHO05D004771 4.1e-235 817.8 436 95.2
Medtr1g095250 Medicago truncatula HOM05D003701 ORTHO05D004771 4.2e-232 807.7 437 94.1
VMungo0720G1162 Vigna mungo HOM05D003701 ORTHO05D004771 3.5e-218 761.5 440 88.9
Phvul.007G094200 Phaseolus vulgaris HOM05D003701 ORTHO05D004771 6.5e-217 757.3 440 88.4
Glyma.20G179500 Glycine max HOM05D003701 ORTHO05D004771 3.2e-216 755.0 436 88.5
Glyma.10G211400 Glycine max HOM05D003701 ORTHO05D004771 1.2e-215 753.1 436 88.3
arahy.Tifrunner.gnm1.ann1.X76XU5 Arachis hypogaea HOM05D003701 ORTHO05D004771 1.0e-214 750.0 439 87.7
arahy.Tifrunner.gnm1.ann1.V7IKH4 Arachis hypogaea HOM05D003701 ORTHO05D004771 1.4e-214 749.6 439 87.5
Lj5g0008768 Lotus japonicus HOM05D003701 ORTHO05D004771 3.3e-213 745.0 437 86.0
Lalb_Chr06g0162271 Lupinus albus HOM05D003701 ORTHO05D004771 9.1e-211 736.9 434 87.3
Lalb_Chr02g0142141 Lupinus albus HOM05D003701 ORTHO05D004771 1.2e-210 736.5 438 86.3
Atru.chr12.740 Acer truncatum HOM05D003701 ORTHO05D004771 8.8e-206 720.3 434 84.3
arahy.Tifrunner.gnm1.ann1.6FL4NC Arachis hypogaea HOM05D003701 ORTHO05D004771 2.6e-205 718.8 443 83.5
Ciclev10031547m.g Citrus clementina HOM05D003701 ORTHO05D004771 2.3e-201 705.7 441 81.9
Manes.10G045200 Manihot esculenta HOM05D003701 ORTHO05D004771 2.9e-201 705.3 428 83.2
QL08p056106 Quercus lobata HOM05D003701 ORTHO05D004771 1.5e-200 703.0 424 84.2
TAR633G1876 Trochodendron aralioides HOM05D003701 ORTHO05D004771 4.2e-200 701.4 428 81.8
Potri.010G221600 Populus trichocarpa HOM05D003701 ORTHO05D004771 3.0e-198 695.3 427 82.7
Duzib106G0278 Durio zibethinus HOM05D003701 ORTHO05D004771 4.0e-198 694.9 429 80.7
THA.LOC104827296 Tarenaya hassleriana HOM05D003701 ORTHO05D004771 1.2e-197 693.3 430 82.3
CiPaw.02G174300 Carya illinoinensis HOM05D003701 ORTHO05D004771 1.5e-197 693.0 435 81.8
Thecc.10G072600 Theobroma cacao HOM05D003701 ORTHO05D004771 2.6e-197 692.2 429 80.2
GSVIVG01016288001 Vitis vinifera HOM05D003701 ORTHO05D004771 2.6e-197 692.2 428 81.8
Thhalv10011486m.g Eutrema salsugineum HOM05D003701 ORTHO05D004771 5.7e-197 691.0 435 80.2
Gohir.A10G206500 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.3e-196 689.9 429 79.7
FAN03G0046 Fragaria x ananassa HOM05D003701 ORTHO05D004771 1.7e-196 689.5 429 82.3
FAN10G2919 Fragaria x ananassa HOM05D003701 ORTHO05D004771 1.7e-196 689.5 429 82.1
Gohir.D05G297000 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.7e-196 689.5 429 79.7
Gorai.009G314200 Gossypium raimondii HOM05D003701 ORTHO05D004771 1.7e-196 689.5 429 79.7
TAR623G1268 Trochodendron aralioides HOM05D003701 ORTHO05D004771 1.7e-196 689.5 429 81.4
Potri.008G040700 Populus trichocarpa HOM05D003701 ORTHO05D004771 2.2e-196 689.1 426 82.2
Hund12041 Selenicereus undatus HOM05D003701 ORTHO05D004771 2.8e-196 688.7 430 80.2
BcaB02g11304 Brassica carinata HOM05D003701 ORTHO05D004771 6.3e-196 687.6 430 80.9
FAN06G0474 Fragaria x ananassa HOM05D003701 ORTHO05D004771 8.3e-196 687.2 435 80.9
Gohir.D10G214600 Gossypium hirsutum HOM05D003701 ORTHO05D004771 8.3e-196 687.2 429 79.5
RcHm_v2.0_Chr1g0363491 Rosa chinensis HOM05D003701 ORTHO05D004771 8.3e-196 687.2 428 81.3
A08p04400 Brassica napus HOM05D003701 ORTHO05D004771 3.1e-195 685.3 435 79.8
BolC8t47272H Brassica oleracea HOM05D003701 ORTHO05D004771 3.1e-195 685.3 435 79.8
Sabra08G0027700 Salix brachista HOM05D003701 ORTHO05D004771 3.1e-195 685.3 431 81.4
CSS0025729 Camellia sinensis var. sinensis HOM05D003701 ORTHO05D004771 4.1e-195 684.9 429 81.4
FvH4_7g19670 Fragaria vesca HOM05D003701 ORTHO05D004771 4.1e-195 684.9 429 81.8
MD01G1108900 Malus domestica HOM05D003701 ORTHO05D004771 4.1e-195 684.9 432 79.9
C08p04710 Brassica napus HOM05D003701 ORTHO05D004771 5.4e-195 684.5 435 79.8
Gohir.A05G297100 Gossypium hirsutum HOM05D003701 ORTHO05D004771 5.4e-195 684.5 429 79.0
BraA08t32466Z Brassica rapa HOM05D003701 ORTHO05D004771 7.0e-195 684.1 435 79.5
ClCG08G007450 Citrullus lanatus HOM05D003701 ORTHO05D004771 7.0e-195 684.1 438 76.7
Sc09g0006470 Simmondsia chinensis HOM05D003701 ORTHO05D004771 7.0e-195 684.1 429 80.2
BcaB04g17381 Brassica carinata HOM05D003701 ORTHO05D004771 9.2e-195 683.7 435 79.8
BcaC05g27549 Brassica carinata HOM05D003701 ORTHO05D004771 9.2e-195 683.7 435 79.5
C05p35350 Brassica napus HOM05D003701 ORTHO05D004771 9.2e-195 683.7 435 79.5
BolC5t32248H Brassica oleracea HOM05D003701 ORTHO05D004771 9.2e-195 683.7 435 79.5
Sp1g35740 Schrenkiella parvula HOM05D003701 ORTHO05D004771 9.2e-195 683.7 435 79.5
Psat6g184400 Pisum sativum HOM05D003701 ORTHO05D004771 1.2e-194 683.3 359 95.5
BcaC07g37102 Brassica carinata HOM05D003701 ORTHO05D004771 1.6e-194 682.9 435 79.5
A05p20860 Brassica napus HOM05D003701 ORTHO05D004771 1.6e-194 682.9 435 79.5
BraA05t20991Z Brassica rapa HOM05D003701 ORTHO05D004771 1.6e-194 682.9 435 79.5
Dinv11780 Davidia involucrata HOM05D003701 ORTHO05D004771 1.6e-194 682.9 430 81.6
AL1G55580 Arabidopsis lyrata HOM05D003701 ORTHO05D004771 2.0e-194 682.6 428 81.1
MELO3C019790.2 Cucumis melo HOM05D003701 ORTHO05D004771 2.7e-194 682.2 432 78.0
CANSAT56G3258 Cannabis sativa HOM05D003701 ORTHO05D004771 4.5e-194 681.4 432 79.4
Carub.0001s3800 Capsella rubella HOM05D003701 ORTHO05D004771 5.9e-194 681.0 431 80.3
CsaV3_6G036360 Cucumis sativus L. HOM05D003701 ORTHO05D004771 5.9e-194 681.0 432 77.8
Eucgr.G02824 Eucalyptus grandis HOM05D003701 ORTHO05D004771 5.9e-194 681.0 436 78.9
Hma1.2p1_1004F.1_g246800 Hydrangea macrophylla HOM05D003701 ORTHO05D004771 5.9e-194 681.0 429 81.4
HanXRQChr09g0249701 Helianthus annuus HOM05D003701 ORTHO05D004771 7.8e-194 680.6 433 80.8
Sc06g0004590 Simmondsia chinensis HOM05D003701 ORTHO05D004771 2.3e-193 679.1 424 80.2
TWI74G0111 Tripterygium wilfordii HOM05D003701 ORTHO05D004771 1.1e-192 676.8 428 79.4
TWI74G0263 Tripterygium wilfordii HOM05D003701 ORTHO05D004771 1.1e-192 676.8 428 79.4
MD07G1175200 Malus domestica HOM05D003701 ORTHO05D004771 1.9e-192 676.0 427 79.4
AT1G48850 Arabidopsis thaliana HOM05D003701 ORTHO05D004771 2.5e-192 675.6 427 80.3
CARHR038850 Cardamine hirsuta HOM05D003701 ORTHO05D004771 3.3e-192 675.2 435 78.9
MBI10_g04889_MAGBIO Magnolia biondii HOM05D003701 ORTHO05D004771 4.3e-192 674.9 436 78.9
HanXRQChr15g0496661 Helianthus annuus HOM05D003701 ORTHO05D004771 7.3e-192 674.1 429 79.7
Sed0016616 Sechium edule HOM05D003701 ORTHO05D004771 7.3e-192 674.1 436 76.4
Sopen04g019270 Solanum pennellii HOM05D003701 ORTHO05D004771 1.2e-191 673.3 438 77.9
PGSC0003DMG400024392 Solanum tuberosum HOM05D003701 ORTHO05D004771 1.2e-191 673.3 439 78.4
AUR62041045 Chenopodium quinoa HOM05D003701 ORTHO05D004771 1.6e-191 672.9 427 80.1
Solyc04g049350.4 Solanum lycopersicum HOM05D003701 ORTHO05D004771 2.1e-191 672.5 444 77.0
CAN.G186.45 Capsicum annuum HOM05D003701 ORTHO05D004771 3.6e-191 671.8 435 79.5
Lsat_1_v5_gn_2_114381 Lactuca sativa HOM05D003701 ORTHO05D004771 4.7e-191 671.4 428 80.6
Peaxi162Scf00747g00122 Petunia axillaris HOM05D003701 ORTHO05D004771 8.0e-191 670.6 438 79.2
Solyc04g009620.4 Solanum lycopersicum HOM05D003701 ORTHO05D004771 8.0e-191 670.6 427 80.1
Nn2g13085 Nelumbo nucifera HOM05D003701 ORTHO05D004771 1.0e-190 670.2 427 78.2
Nitab4.5_0005490g0010 Nicotiana tabacum HOM05D003701 ORTHO05D004771 1.0e-190 670.2 439 78.1
PGSC0003DMG400016016 Solanum tuberosum HOM05D003701 ORTHO05D004771 1.0e-190 670.2 437 78.7
Cpa.g.sc53.71 Carica papaya HOM05D003701 ORTHO05D004771 2.3e-190 669.1 453 75.9
MBI02_g43493_MAGBIO Magnolia biondii HOM05D003701 ORTHO05D004771 2.3e-190 669.1 428 79.2
MSTRG.8153 Avicennia marina HOM05D003701 ORTHO05D004771 4.0e-190 668.3 442 77.8
Sopen04g004770 Solanum pennellii HOM05D003701 ORTHO05D004771 6.8e-190 667.5 427 79.6
Aa31LG10G4830 Aethionema arabicum HOM05D003701 ORTHO05D004771 8.9e-190 667.2 432 77.1
DCAR_015315 Daucus carota HOM05D003701 ORTHO05D004771 8.9e-190 667.2 428 80.6
MSTRG.367 Avicennia marina HOM05D003701 ORTHO05D004771 1.2e-189 666.8 427 79.2
Ah.06g192010 Amaranthus hybridus HOM05D003701 ORTHO05D004771 1.5e-189 666.4 428 78.3
FAN01G1080 Fragaria x ananassa HOM05D003701 ORTHO05D004771 1.5e-189 666.4 468 75.4
Sabra10G0171500 Salix brachista HOM05D003701 ORTHO05D004771 3.4e-189 665.2 473 73.6
Migut.F01774 Erythranthe guttata HOM05D003701 ORTHO05D004771 4.4e-189 664.8 425 78.8
Gorai.011G240100 Gossypium raimondii HOM05D003701 ORTHO05D004771 4.4e-189 664.8 429 77.2
Gorai.011G240200 Gossypium raimondii HOM05D003701 ORTHO05D004771 4.4e-189 664.8 384 83.9
Actinidia38848 Actinidia chinensis HOM05D003701 ORTHO05D004771 9.8e-189 663.7 435 77.9
CDE04G2332 Ceratophyllum demersum HOM05D003701 ORTHO05D004771 9.8e-189 663.7 429 78.3
PSO339G3023 Papaver somniferum HOM05D003701 ORTHO05D004771 9.8e-189 663.7 428 79.2
Gohir.A10G206400 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.3e-188 663.3 429 76.9
Lj1A914T43 Lonicera japonica HOM05D003701 ORTHO05D004771 2.2e-188 662.5 429 79.5
PSO063G5795 Papaver somniferum HOM05D003701 ORTHO05D004771 2.2e-188 662.5 416 80.3
ATR0115G006 Amborella trichopoda HOM05D003701 ORTHO05D004771 3.7e-188 661.8 429 78.1
AUR62037661 Chenopodium quinoa HOM05D003701 ORTHO05D004771 4.9e-188 661.4 447 76.3
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 6.4e-188 661.0 393 82.4
ECA232G2521 Erigeron canadensis HOM05D003701 ORTHO05D004771 1.4e-187 659.8 428 79.7
FAN10G2344 Fragaria x ananassa HOM05D003701 ORTHO05D004771 4.1e-187 658.3 429 79.5
Aqoxy1G01249 Aquilegia oxysepala HOM05D003701 ORTHO05D004771 1.2e-186 656.8 426 78.2
PGR142G1908 Punica granatum HOM05D003701 ORTHO05D004771 7.8e-186 654.1 425 77.4
Nitab4.5_0001029g0070 Nicotiana tabacum HOM05D003701 ORTHO05D004771 1.3e-185 653.3 467 73.4
EL10Ac2g03249 Beta vulgaris HOM05D003701 ORTHO05D004771 5.0e-185 651.4 428 76.9
Actinidia03057 Actinidia chinensis HOM05D003701 ORTHO05D004771 5.8e-181 637.9 426 75.8
SEGI_31492 Sequoiadendron giganteum HOM05D003701 ORTHO05D004771 1.9e-179 632.9 430 76.0
Duzib114G1041 Durio zibethinus HOM05D003701 ORTHO05D004771 9.2e-179 630.6 441 73.2
unitig_899.g14441 Utricularia gibba HOM05D003701 ORTHO05D004771 3.5e-178 628.6 429 76.2
arahy.Tifrunner.gnm1.ann1.914CGH Arachis hypogaea HOM05D003701 ORTHO05D004771 7.8e-178 627.5 349 88.5
HPP92_012666 Vanilla planifolia HOM05D003701 ORTHO05D004771 3.0e-177 625.5 438 73.1
Rhsim09G0152400 Rhododendron simsii HOM05D003701 ORTHO05D004771 8.6e-177 624.0 516 66.3
vmacro04876 Vaccinium macrocarpon HOM05D003701 ORTHO05D004771 3.3e-176 622.1 545 63.7
Migut.F01773 Erythranthe guttata HOM05D003701 ORTHO05D004771 3.6e-175 618.6 388 78.1
Gohir.D05G297025 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.8e-174 616.3 430 73.3
DCAR_012659 Daucus carota HOM05D003701 ORTHO05D004771 4.0e-174 615.1 381 79.8
CSS0011231 Camellia sinensis var. sinensis HOM05D003701 ORTHO05D004771 5.2e-174 614.8 429 73.9
Os03g0254800 Oryza sativa ssp. japonica HOM05D003701 ORTHO05D004771 9.9e-173 610.5 383 76.8
AagrBONN_evm.TU.Sc2ySwM_369.393 Anthoceros agrestis HOM05D003701 ORTHO05D004771 1.1e-171 607.1 380 80.5
Mapoly0007s0052 Marchantia polymorpha HOM05D003701 ORTHO05D004771 1.4e-171 606.7 430 72.6
SalBow4G1339 Salvia bowleyana HOM05D003701 ORTHO05D004771 2.4e-171 605.9 427 72.8
CAN.G186.44 Capsicum annuum HOM05D003701 ORTHO05D004771 2.3e-169 599.4 401 73.1
SMO146G0105 Selaginella moellendorffii HOM05D003701 ORTHO05D004771 3.9e-169 598.6 390 76.4
GSVIVG01025176001 Vitis vinifera HOM05D003701 ORTHO05D004771 3.3e-168 595.5 430 69.3
Prupe.2G214400 Prunus persica HOM05D003701 ORTHO05D004771 2.0e-165 586.3 363 80.4
CiPaw.01G273500 Carya illinoinensis HOM05D003701 ORTHO05D004771 4.3e-160 568.5 337 84.9
Oeu027479.1 Olea europaea HOM05D003701 ORTHO05D004771 5.3e-158 561.6 343 83.1
CANSAT78G2428 Cannabis sativa HOM05D003701 ORTHO05D004771 1.2e-157 560.5 357 75.6
Oeu007390.4 Olea europaea HOM05D003701 ORTHO05D004771 9.3e-155 550.8 349 80.2
Zm00001eb011020 Zea mays HOM05D003701 ORTHO05D004771 3.2e-147 525.8 321 79.1
Dinv31329 Davidia involucrata HOM05D003701 ORTHO05D004771 4.2e-147 525.4 336 80.4
MCO05G587 Micromonas commoda HOM05D003701 ORTHO05D004771 9.3e-147 524.2 370 70.0
unitig_736.g22517 Utricularia gibba HOM05D003701 ORTHO05D004771 3.9e-145 518.8 425 65.9
CDE07G1562 Ceratophyllum demersum HOM05D003701 ORTHO05D004771 6.7e-145 518.1 427 65.1
Cre03.g145747 Chlamydomonas reinhardtii HOM05D003701 ORTHO05D004771 1.3e-143 513.8 371 69.8
PRCOL_00001179 Prasinoderma coloniale HOM05D003701 ORTHO05D004771 1.5e-141 506.9 366 71.0
Eucgr.J01090 Eucalyptus grandis HOM05D003701 ORTHO05D004771 1.4e-139 500.4 342 75.1
COL.COLO4_23690 Corchorus olitorius HOM05D003701 ORTHO05D004771 3.8e-132 475.7 261 87.0
Zm00001eb398410 Zea mays HOM05D003701 ORTHO05D004771 1.6e-122 443.7 315 69.2
Pp3c1_35940 Physcomitrium patens HOM05D003701 ORTHO05D004771 2.4e-118 429.9 267 79.4
CBR_g41627 Chara braunii HOM05D003701 ORTHO05D004771 1.7e-116 423.7 383 60.3
COL.COLO4_23691 Corchorus olitorius HOM05D003701 ORTHO05D004771 1.8e-113 413.7 258 80.2
Haze_16899 Corylus avellana HOM05D003701 ORTHO05D004771 7.0e-102 375.2 230 82.6
Gohir.D10G214532 Gossypium hirsutum HOM05D003701 ORTHO05D004771 9.8e-96 354.8 243 72.4
Cc09_g02030 Coffea canephora HOM05D003701 ORTHO05D004771 4.0e-89 332.8 231 74.5
Cc09_g02040 Coffea canephora HOM05D003701 ORTHO05D004771 4.7e-82 309.3 193 82.4
Haze_27259 Corylus avellana HOM05D003701 ORTHO05D004771 1.8e-81 307.4 365 45.5
Gohir.D10G214466 Gossypium hirsutum HOM05D003701 ORTHO05D004771 2.0e-80 303.9 182 82.4
Cfa022484 Carpinus fangiana HOM05D003701 ORTHO05D004771 8.3e-79 298.5 355 49.9
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 4.6e-69 266.2 154 81.2
RcHm_v2.0_Chr4g0427911 Rosa chinensis HOM05D003701 ORTHO05D004771 8.1e-66 255.4 220 65.5
TAR636G0034 Trochodendron aralioides HOM05D003701 ORTHO05D004771 1.4e-62 244.6 232 56.9
TAR636G0416 Trochodendron aralioides HOM05D003701 ORTHO05D004771 1.4e-62 244.6 232 56.9
MSTRG.366 Avicennia marina HOM05D003701 ORTHO05D004771 2.3e-60 237.3 146 80.1
FAN12G0728 Fragaria x ananassa HOM05D003701 ORTHO05D004771 2.8e-58 230.3 244 57.0
MD01G1109200 Malus domestica HOM05D003701 ORTHO05D004771 1.3e-44 184.9 140 66.4
Glyma.14G185633 Glycine max HOM05D003701 ORTHO05D004771 1.9e-43 181.0 100 89.0
SMO173G0015 Selaginella moellendorffii HOM05D003701 ORTHO05D004771 6.2e-34 149.4 220 47.3
FAN17G1952 Fragaria x ananassa HOM05D003701 ORTHO05D004771 1.1e-33 148.7 295 38.6
QL07p006097 Quercus lobata HOM05D003701 ORTHO05D030296 1.5e-27 128.3 82 78.0
VMungo0647G0194 Vigna mungo HOM05D003701 ORTHO05D432816 2.4e-25 120.9 89 73.0
Oeu052763.1 Olea europaea HOM05D003701 ORTHO05D030296 1.4e-22 111.7 60 91.7
FAN12G0587 Fragaria x ananassa HOM05D003701 ORTHO05D004771 1.5e-19 101.7 90 58.9
QL07p006183 Quercus lobata HOM05D003701 ORTHO05D030296 2.5e-19 100.9 59 84.7
QL09p045974 Quercus lobata HOM05D003701 ORTHO05D030296 2.5e-19 100.9 59 84.7
FAN01G1877 Fragaria x ananassa HOM05D003701 ORTHO05D208017 3.7e-18 97.1 79 65.8
Medtr0368s0020 Medicago truncatula HOM05D003701 ORTHO05D026922 2.4e-17 94.4 49 91.8
Glyma.14G185666 Glycine max HOM05D003701 ORTHO05D026922 2.0e-16 91.3 48 93.8
Oeu043945.1 Olea europaea HOM05D003701 ORTHO05D004771 7.2e-14 82.8 46 80.4
CBR_g74262 Chara braunii HOM05D003701 ORTHO05D004771 2.0e-08 64.7 43 74.4
C02p38530 Brassica napus HOM05D003701 ORTHO05D101262 3.4e-08 63.9 81 46.9
BolC2t09870H Brassica oleracea HOM05D003701 ORTHO05D041413 1.0e-07 62.4 81 48.1
C05p40290 Brassica napus HOM05D003701 ORTHO05D041413 1.3e-07 62.0 81 48.1
Rhsim05G0028600 Rhododendron simsii HOM05D000745 ORTHO05D000641 4.2e-06 57.0 28 82.1


User provided reference genes

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