Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_17791_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 2.5e-72 275.4 144 100.0
Ca_29552_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 2.5e-72 275.4 144 100.0
Psat7g058640 Pisum sativum HOM05D007364 ORTHO05D009275 3.5e-58 228.4 144 79.2
TPR.G6288 Trifolium pratense HOM05D007364 ORTHO05D009275 7.8e-58 227.3 144 79.9
Lj4g0012611 Lotus japonicus HOM05D007364 ORTHO05D009275 5.8e-53 211.1 144 72.2
Glyma.08G130400 Glycine max HOM05D007364 ORTHO05D009275 1.7e-52 209.5 134 76.1
Glyma.05G173100 Glycine max HOM05D007364 ORTHO05D009275 1.2e-50 203.4 138 73.2
arahy.Tifrunner.gnm1.ann1.TFQ65X Arachis hypogaea HOM05D007364 ORTHO05D009275 2.7e-50 202.2 144 70.1
arahy.Tifrunner.gnm1.ann1.A7U39C Arachis hypogaea HOM05D007364 ORTHO05D009275 7.8e-50 200.7 144 69.4
VMungo0251G1224 Vigna mungo HOM05D007364 ORTHO05D009275 3.0e-49 198.7 138 70.3
Phvul.002G258200 Phaseolus vulgaris HOM05D007364 ORTHO05D009275 6.2e-47 191.0 138 68.1
Lalb_Chr07g0185511 Lupinus albus HOM05D007364 ORTHO05D009275 1.1e-46 190.3 132 69.7
Cfa003431 Carpinus fangiana HOM05D007364 ORTHO05D009275 3.5e-42 175.3 142 61.3
Haze_16200 Corylus avellana HOM05D007364 ORTHO05D009275 3.0e-41 172.2 142 61.3
ClCG07G014710 Citrullus lanatus HOM05D007364 ORTHO05D009275 6.2e-39 164.5 118 66.9
Manes.14G008700 Manihot esculenta HOM05D007364 ORTHO05D009275 1.1e-38 163.7 144 59.0
QL05p088447 Quercus lobata HOM05D007364 ORTHO05D009275 2.6e-37 159.1 142 56.3
MELO3C010416.2 Cucumis melo HOM05D007364 ORTHO05D009275 4.4e-37 158.3 144 56.2
FvH4_6g36820 Fragaria vesca HOM05D007364 ORTHO05D009275 4.4e-37 158.3 144 56.9
FAN02G1908 Fragaria x ananassa HOM05D007364 ORTHO05D009275 4.4e-37 158.3 144 56.9
FAN14G5026 Fragaria x ananassa HOM05D007364 ORTHO05D009275 4.4e-37 158.3 144 56.9
Prupe.3G024300 Prunus persica HOM05D007364 ORTHO05D009275 4.4e-37 158.3 135 59.3
FAN05G2474 Fragaria x ananassa HOM05D007364 ORTHO05D009275 5.8e-37 157.9 139 56.8
Gohir.A05G115400 Gossypium hirsutum HOM05D007364 ORTHO05D009275 1.3e-36 156.8 142 58.5
Thecc.06G054700 Theobroma cacao HOM05D007364 ORTHO05D009275 2.9e-36 155.6 138 58.7
Duzib235G1177 Durio zibethinus HOM05D007364 ORTHO05D009275 3.7e-36 155.2 141 57.4
Gohir.D05G115800 Gossypium hirsutum HOM05D007364 ORTHO05D009275 3.7e-36 155.2 142 57.7
TAR636G2112 Trochodendron aralioides HOM05D007364 ORTHO05D009275 3.7e-36 155.2 144 56.2
RcHm_v2.0_Chr2g0149211 Rosa chinensis HOM05D007364 ORTHO05D009275 4.9e-36 154.8 144 55.6
Gorai.009G119800 Gossypium raimondii HOM05D007364 ORTHO05D009275 6.4e-36 154.5 142 57.7
MD09G1166600 Malus domestica HOM05D007364 ORTHO05D009275 6.4e-36 154.5 139 58.3
Potri.010G254100 Populus trichocarpa HOM05D007364 ORTHO05D009275 1.1e-35 153.7 140 55.0
TAR625G0136 Trochodendron aralioides HOM05D007364 ORTHO05D009275 1.2e-34 150.2 137 53.3
Aqoxy5G03758 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 1.6e-34 149.8 117 59.8
Ciclev10013953m.g Citrus clementina HOM05D007364 ORTHO05D009275 1.6e-34 149.8 142 53.5
TWI38G2254 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 4.6e-34 148.3 128 58.6
TWI63G0101 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 1.3e-33 146.7 120 59.2
CANSAT78G1269 Cannabis sativa HOM05D007364 ORTHO05D009275 1.7e-33 146.4 124 57.3
FAN09G0058 Fragaria x ananassa HOM05D007364 ORTHO05D009275 3.0e-33 145.6 129 58.1
Ah.15g094280 Amaranthus hybridus HOM05D007364 ORTHO05D009275 1.5e-32 143.3 139 52.5
Atru.chr1.2614 Acer truncatum HOM05D007364 ORTHO05D009275 4.3e-32 141.7 139 53.2
AUR62001324 Chenopodium quinoa HOM05D007364 ORTHO05D009275 4.3e-32 141.7 120 55.8
AUR62025707 Chenopodium quinoa HOM05D007364 ORTHO05D009275 2.8e-31 139.0 120 54.2
Nitab4.5_0011805g0010 Nicotiana tabacum HOM05D007364 ORTHO05D009275 2.8e-31 139.0 128 58.6
PSO063G5199 Papaver somniferum HOM05D007364 ORTHO05D009275 4.7e-31 138.3 145 49.7
EL10Ac7g18129 Beta vulgaris HOM05D007364 ORTHO05D009275 1.4e-30 136.7 120 54.2
Peaxi162Scf00062g00099 Petunia axillaris HOM05D007364 ORTHO05D009275 3.1e-30 135.6 128 55.5
MBI16_g18204_MAGBIO Magnolia biondii HOM05D007364 ORTHO05D009275 6.8e-30 134.4 144 50.7
CARHR017250 Cardamine hirsuta HOM05D007364 ORTHO05D009275 1.2e-29 133.7 141 50.4
Eucgr.J03185 Eucalyptus grandis HOM05D007364 ORTHO05D009275 2.0e-29 132.9 141 48.9
Aa31LG7G1240 Aethionema arabicum HOM05D007364 ORTHO05D009275 4.4e-29 131.7 121 52.9
Solyc12g099960.1 Solanum lycopersicum HOM05D007364 ORTHO05D009275 4.4e-29 131.7 123 56.9
CAN.G484.12 Capsicum annuum HOM05D007364 ORTHO05D009275 5.8e-29 131.3 128 57.0
PGSC0003DMG400004654 Solanum tuberosum HOM05D007364 ORTHO05D009275 5.8e-29 131.3 128 55.5
Sopen12g034580 Solanum pennellii HOM05D007364 ORTHO05D009275 7.6e-29 131.0 128 55.5
Carub.0001s1652 Capsella rubella HOM05D007364 ORTHO05D009275 2.2e-28 129.4 141 48.9
Sed0001602 Sechium edule HOM05D007364 ORTHO05D009275 2.9e-28 129.0 120 50.0
AT1G16790 Arabidopsis thaliana HOM05D007364 ORTHO05D009275 4.9e-28 128.3 141 49.6
AL1G28960 Arabidopsis lyrata HOM05D007364 ORTHO05D009275 6.4e-28 127.9 141 48.9
THA.LOC104812333 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 6.4e-28 127.9 125 52.8
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 8.4e-28 127.5 147 49.0
BcaC07g38817 Brassica carinata HOM05D007364 ORTHO05D009275 1.9e-27 126.3 147 47.6
PGR031G1732 Punica granatum HOM05D007364 ORTHO05D009275 1.9e-27 126.3 143 49.7
PSO170G0377 Papaver somniferum HOM05D007364 ORTHO05D009275 2.4e-27 125.9 112 54.5
Aqoxy2G03840 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 5.4e-27 124.8 101 57.4
Sp1g14930 Schrenkiella parvula HOM05D007364 ORTHO05D009275 5.4e-27 124.8 141 48.9
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 1.2e-26 123.6 147 46.3
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 1.6e-26 123.2 147 45.6
Thhalv10009015m.g Eutrema salsugineum HOM05D007364 ORTHO05D009275 1.6e-26 123.2 146 46.6
Sc15g0001160 Simmondsia chinensis HOM05D000912 ORTHO05D008392 2.1e-26 122.9 118 51.7
LjContig00484g0025496 Lotus japonicus HOM05D007364 ORTHO05D009275 3.5e-26 122.1 99 61.6
BcaB03g13030 Brassica carinata HOM05D007364 ORTHO05D009275 1.0e-25 120.6 147 43.5
Actinidia21894 Actinidia chinensis HOM05D007364 ORTHO05D009275 5.1e-25 118.2 123 50.4
COL.COLO4_38285 Corchorus olitorius HOM05D007364 ORTHO05D009275 5.1e-25 118.2 98 58.2
C05p15020 Brassica napus HOM05D007364 ORTHO05D009275 8.7e-25 117.5 143 48.3
Cc09_g07400 Coffea canephora HOM05D007364 ORTHO05D009275 1.1e-24 117.1 149 47.7
A06p12720 Brassica napus HOM05D007364 ORTHO05D009275 1.5e-24 116.7 146 48.6
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 1.5e-24 116.7 138 49.3
BolC5t30217H Brassica oleracea HOM05D007364 ORTHO05D009275 1.9e-24 116.3 143 47.6
BraA06t24432Z Brassica rapa HOM05D007364 ORTHO05D009275 1.9e-24 116.3 146 48.6
CsaV3_4G028750 Cucumis sativus L. HOM05D007364 ORTHO05D009275 3.3e-24 115.5 111 55.9
Actinidia38815 Actinidia chinensis HOM05D007364 ORTHO05D009275 4.3e-24 115.2 123 50.4
Hma1.2p1_0191F.1_g083440 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 7.3e-24 114.4 131 47.3
Hma1.2p1_3076F.1_g332395 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 7.3e-24 114.4 131 47.3
Nitab4.5_0001925g0240 Nicotiana tabacum HOM05D007364 ORTHO05D009275 2.1e-23 112.8 110 56.4
DCAR_001424 Daucus carota HOM05D007364 ORTHO05D009275 6.9e-22 107.8 112 50.0
Lsat_1_v5_gn_4_106261 Lactuca sativa HOM05D007364 ORTHO05D009275 1.2e-21 107.1 120 45.8
BcaC05g25538 Brassica carinata HOM05D007364 ORTHO05D009275 6.4e-20 101.3 125 48.0
CiPaw.01G094100 Carya illinoinensis HOM05D007364 ORTHO05D009275 8.4e-20 100.9 92 53.3
THA.LOC104808105 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 1.1e-19 100.5 114 45.6
CiPaw.01G207600 Carya illinoinensis HOM05D007364 ORTHO05D009275 3.2e-19 99.0 73 64.4
Oeu047568.2 Olea europaea HOM05D007364 ORTHO05D009275 4.2e-19 98.6 119 45.4
unitig_26.g10058 Utricularia gibba HOM05D007364 ORTHO05D009275 9.3e-19 97.4 133 42.9
BcaB02g06675 Brassica carinata HOM05D007364 ORTHO05D009275 1.2e-18 97.1 95 53.7
Migut.I01209 Erythranthe guttata HOM05D007364 ORTHO05D009275 2.1e-18 96.3 131 40.5
HPP92_017099 Vanilla planifolia HOM05D007364 ORTHO05D009275 2.7e-18 95.9 141 41.1
HPP92_017109 Vanilla planifolia HOM05D007364 ORTHO05D009275 3.5e-18 95.5 141 41.1
HanXRQChr04g0125291 Helianthus annuus HOM05D007364 ORTHO05D009275 8.7e-17 90.9 120 42.5
Atru.chr2.3597 Acer truncatum HOM05D007364 ORTHO05D009275 1.1e-16 90.5 68 63.2
SGA_v2.0_scaffold71G23970 Striga asiatica HOM05D007364 ORTHO05D009275 9.6e-16 87.4 153 34.6
SalBow6G2338 Salvia bowleyana HOM05D007364 ORTHO05D009275 1.6e-15 86.7 122 42.6
Lj9P543T41 Lonicera japonica HOM05D007364 ORTHO05D009275 8.1e-15 84.3 102 46.1
ECA232G2752 Erigeron canadensis HOM05D007364 ORTHO05D009275 1.2e-13 80.5 120 36.7
Pp3c19_20210 Physcomitrium patens HOM05D007364 ORTHO05D009275 2.6e-13 79.3 126 38.1
Mapoly0061s0135 Marchantia polymorpha HOM05D007364 ORTHO05D009275 1.9e-11 73.2 118 36.4
AUR62015398 Chenopodium quinoa HOM05D007364 ORTHO05D009275 6.0e-10 68.2 64 50.0
AUR62040375 Chenopodium quinoa HOM05D007364 ORTHO05D009275 7.9e-10 67.8 69 46.4
SEGI_24559 Sequoiadendron giganteum HOM05D007364 ORTHO05D009275 6.7e-09 64.7 105 34.3
SalBow7G1183 Salvia bowleyana HOM05D003223 ORTHO05D004865 5.3e-06 55.1 121 37.2


User provided reference genes

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