Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_29523_v3 Cicer arietinum L. HOM05D000291 ORTHO05D010303 1.4e-101 372.9 179 100.0
Ca_17245_v3 Cicer arietinum L. HOM05D000291 ORTHO05D010303 3.2e-101 371.7 179 99.4
Ca_04177_v3 Cicer arietinum L. HOM05D000462 ORTHO05D002607 8.1e-97 357.1 175 97.7
TPR.G12798 Trifolium pratense HOM05D000291 ORTHO05D010303 6.4e-78 294.3 185 81.6
Medtr8g106040 Medicago truncatula HOM05D000291 ORTHO05D010303 1.9e-77 292.7 182 81.9
Psat7g004440 Pisum sativum HOM05D000291 ORTHO05D010303 2.1e-52 209.5 176 64.2
Lj4g0009422 Lotus japonicus HOM05D000291 ORTHO05D010303 5.0e-46 188.3 189 58.7
Phvul.002G324400 Phaseolus vulgaris HOM05D000291 ORTHO05D010303 1.5e-42 176.8 186 58.1
Glyma.05G241300 Glycine max HOM05D000291 ORTHO05D010303 3.3e-42 175.6 195 57.9
VMungo0251G3183 Vigna mungo HOM05D000291 ORTHO05D010303 4.1e-40 168.7 196 54.1
Dinv11755 Davidia involucrata HOM05D000291 ORTHO05D010303 5.3e-32 141.7 197 44.7
Nitab4.5_0000538g0110 Nicotiana tabacum HOM05D000291 ORTHO05D010303 3.8e-30 135.6 190 43.2
RcHm_v2.0_Chr4g0442371 Rosa chinensis HOM05D000291 ORTHO05D010303 3.8e-30 135.6 160 46.9
Dinv14389 Davidia involucrata HOM05D000291 ORTHO05D010303 8.5e-30 134.4 199 45.2
TAR371G0775 Trochodendron aralioides HOM05D000291 ORTHO05D010303 1.1e-29 134.0 204 42.6
MD16G1015500 Malus domestica HOM05D000291 ORTHO05D010303 1.5e-29 133.7 213 41.3
TWI74G0044 Tripterygium wilfordii HOM05D000291 ORTHO05D010303 1.5e-29 133.7 197 43.7
Manes.17G086200 Manihot esculenta HOM05D000291 ORTHO05D010303 3.2e-29 132.5 207 41.5
Thecc.02G306700 Theobroma cacao HOM05D000291 ORTHO05D010303 4.2e-29 132.1 187 42.8
Prupe.1G336100 Prunus persica HOM05D000291 ORTHO05D010303 9.4e-29 131.0 214 39.3
Hma1.2p1_0658F.1_g197230 Hydrangea macrophylla HOM05D000291 ORTHO05D010303 1.2e-28 130.6 213 39.0
Duzib251G0233 Durio zibethinus HOM05D000291 ORTHO05D010303 4.7e-28 128.6 201 41.3
Hma1.2p1_1450F.1_g284200 Hydrangea macrophylla HOM05D000291 ORTHO05D010303 4.7e-28 128.6 174 43.7
FAN22G1037 Fragaria x ananassa HOM05D000291 ORTHO05D010303 6.1e-28 128.3 162 46.9
DCAR_023554 Daucus carota HOM05D000291 ORTHO05D010303 2.3e-27 126.3 196 38.3
FAN17G1500 Fragaria x ananassa HOM05D000291 ORTHO05D010303 2.3e-27 126.3 162 46.9
Peaxi162Scf00193g00131 Petunia axillaris HOM05D000291 ORTHO05D010303 3.9e-27 125.6 191 41.4
Eucgr.G02077 Eucalyptus grandis HOM05D000291 ORTHO05D010303 1.1e-26 124.0 193 40.9
FAN07G2114 Fragaria x ananassa HOM05D000291 ORTHO05D010303 1.1e-26 124.0 163 45.4
FvH4_4g33220 Fragaria vesca HOM05D000291 ORTHO05D010303 3.3e-26 122.5 159 45.9
FAN12G2211 Fragaria x ananassa HOM05D000291 ORTHO05D010303 3.3e-26 122.5 159 45.9
CSS0042111 Camellia sinensis var. sinensis HOM05D000291 ORTHO05D010303 4.4e-26 122.1 232 37.5
Duzib248G0579 Durio zibethinus HOM05D000291 ORTHO05D010303 5.7e-26 121.7 189 39.7
Potri.008G137600 Populus trichocarpa HOM05D000291 ORTHO05D010303 2.2e-25 119.8 213 38.0
Lsat_1_v5_gn_8_36340 Lactuca sativa HOM05D000291 ORTHO05D010303 2.8e-25 119.4 190 41.6
Potri.010G103200 Populus trichocarpa HOM05D000291 ORTHO05D010303 2.8e-25 119.4 172 43.0
Aqoxy3G04029 Aquilegia oxysepala HOM05D000291 ORTHO05D010303 3.7e-25 119.0 204 39.7
Ciclev10018051m.g Citrus clementina HOM05D000291 ORTHO05D010303 3.7e-25 119.0 198 38.4
ECA233G5603 Erigeron canadensis HOM05D000291 ORTHO05D010303 3.7e-25 119.0 191 40.3
Actinidia12414 Actinidia chinensis HOM05D000291 ORTHO05D010303 1.8e-24 116.7 200 37.0
HanXRQChr08g0224691 Helianthus annuus HOM05D000291 ORTHO05D010303 2.4e-24 116.3 173 44.5
QL03p038375 Quercus lobata HOM05D000291 ORTHO05D010303 7.0e-24 114.8 101 57.4
Atru.chr11.801 Acer truncatum HOM05D000291 ORTHO05D010303 9.1e-24 114.4 211 36.5
MD13G1017400 Malus domestica HOM05D000291 ORTHO05D010303 2.0e-23 113.2 238 35.3
TAR629G2096 Trochodendron aralioides HOM05D000291 ORTHO05D010303 2.0e-23 113.2 200 39.5
Oeu043968.1 Olea europaea HOM05D000291 ORTHO05D010303 3.5e-23 112.5 151 43.7
PGR142G3080 Punica granatum HOM05D000291 ORTHO05D010303 3.5e-23 112.5 201 37.3
MBI13_g04213_MAGBIO Magnolia biondii HOM05D000291 ORTHO05D010303 4.5e-23 112.1 138 49.3
Migut.E00503 Erythranthe guttata HOM05D000291 ORTHO05D010303 5.9e-23 111.7 198 40.9
Cc11_g06310 Coffea canephora HOM05D000291 ORTHO05D010303 1.7e-22 110.2 204 36.8
CAN.G282.112 Capsicum annuum HOM05D000291 ORTHO05D010303 2.2e-22 109.8 79 63.3
Cfa015052 Carpinus fangiana HOM05D000291 ORTHO05D010303 1.1e-21 107.5 200 38.0
Gohir.A04G144000 Gossypium hirsutum HOM05D000291 ORTHO05D010303 1.5e-21 107.1 151 41.1
Gohir.D04G188300 Gossypium hirsutum HOM05D000291 ORTHO05D010303 4.2e-21 105.5 151 41.7
Gorai.012G183800 Gossypium raimondii HOM05D000291 ORTHO05D010303 5.5e-21 105.1 151 41.1
PGSC0003DMG400041999 Solanum tuberosum HOM05D000291 ORTHO05D010303 2.7e-20 102.8 183 35.5
CANSAT78G0361 Cannabis sativa HOM05D000291 ORTHO05D010303 4.7e-20 102.1 106 50.0
Haze_10839 Corylus avellana HOM05D000291 ORTHO05D010303 6.1e-20 101.7 68 64.7
Nitab4.5_0002521g0070 Nicotiana tabacum HOM05D000291 ORTHO05D010303 1.4e-19 100.5 172 36.0
Sopen01g001200 Solanum pennellii HOM05D000291 ORTHO05D010303 3.0e-19 99.4 166 38.6
ClCG01G006680 Citrullus lanatus HOM05D000291 ORTHO05D010303 4.1e-16 89.0 164 35.4
ATR0021G052 Amborella trichopoda HOM05D003986 ORTHO05D004916 6.5e-14 81.6 210 30.0
MELO3C005264.2 Cucumis melo HOM05D000291 ORTHO05D010303 5.5e-13 78.6 136 36.8
CsaV3_5G027890 Cucumis sativus L. HOM05D000291 ORTHO05D010303 1.6e-12 77.0 175 33.7
Sed0016275 Sechium edule HOM05D000291 ORTHO05D010303 2.7e-12 76.3 166 35.5
Aqoxy5G02862 Aquilegia oxysepala HOM05D000291 ORTHO05D010303 1.2e-10 70.9 157 36.3
ClCG06G011390 Citrullus lanatus HOM05D000291 ORTHO05D001358 8.6e-06 54.7 85 34.1


User provided reference genes

Program Settings