Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16853_v3 Cicer arietinum L. HOM05D004331 ORTHO05D004984 1.9e-185 652.5 357 100.0
Ca_29501_v3 Cicer arietinum L. HOM05D004331 ORTHO05D004984 1.9e-185 652.5 357 100.0
Psat5g069640 Pisum sativum HOM05D004331 ORTHO05D004984 6.8e-164 580.9 356 86.8
TPR.G13966 Trifolium pratense HOM05D004331 ORTHO05D004984 1.0e-143 513.8 364 81.3
Medtr3g093690 Medicago truncatula HOM05D004331 ORTHO05D004984 1.9e-142 509.6 358 77.1
VMungo1309G0248 Vigna mungo HOM05D004331 ORTHO05D004984 8.5e-114 414.5 306 78.1
ClCG11G005520 Citrullus lanatus HOM05D004331 ORTHO05D004984 1.9e-113 413.3 347 66.9
Lalb_Chr11g0067651 Lupinus albus HOM05D004331 ORTHO05D004984 3.2e-113 412.5 351 71.5
Phvul.009G042200 Phaseolus vulgaris HOM05D004331 ORTHO05D004984 3.9e-111 405.6 324 71.0
TWI73G1241 Tripterygium wilfordii HOM05D004331 ORTHO05D004984 5.2e-111 405.2 346 66.8
Glyma.06G141000 Glycine max HOM05D004331 ORTHO05D004984 3.3e-110 402.5 308 73.4
Sed0000286 Sechium edule HOM05D004331 ORTHO05D004984 2.2e-109 399.8 328 68.0
Duzib114G0903 Durio zibethinus HOM05D004331 ORTHO05D004984 2.8e-109 399.4 345 69.3
Glyma.04G223900 Glycine max HOM05D004331 ORTHO05D004984 3.7e-109 399.1 308 72.4
QL08p065166 Quercus lobata HOM05D004331 ORTHO05D004984 3.7e-109 399.1 261 80.1
arahy.Tifrunner.gnm1.ann1.J1TSCZ Arachis hypogaea HOM05D004331 ORTHO05D004984 6.3e-109 398.3 253 79.4
arahy.Tifrunner.gnm1.ann1.M9I45E Arachis hypogaea HOM05D004331 ORTHO05D004984 8.2e-109 397.9 252 79.0
Cfa001189 Carpinus fangiana HOM05D004331 ORTHO05D004984 4.1e-108 395.6 284 74.6
Haze_17376 Corylus avellana HOM05D004331 ORTHO05D004984 9.1e-108 394.4 284 74.3
Lj1g0025811 Lotus japonicus HOM05D004331 ORTHO05D004984 4.5e-107 392.1 324 67.9
Cpa.g.sc19.35 Carica papaya HOM05D004331 ORTHO05D004984 1.0e-106 391.0 302 69.9
CsaV3_5G039270 Cucumis sativus L. HOM05D004331 ORTHO05D004984 2.9e-106 389.4 339 64.6
CANSAT56G0386 Cannabis sativa HOM05D004331 ORTHO05D004984 5.0e-106 388.7 365 61.6
Duzib128G0601 Durio zibethinus HOM05D004331 ORTHO05D004984 5.0e-106 388.7 329 66.6
Manes.10G004100 Manihot esculenta HOM05D004331 ORTHO05D004984 6.5e-106 388.3 313 65.5
C04p02240 Brassica napus HOM05D004331 ORTHO05D004984 4.2e-105 385.6 358 60.6
AT2G40800 Arabidopsis thaliana HOM05D004331 ORTHO05D004984 5.5e-105 385.2 321 64.5
MD01G1171000 Malus domestica HOM05D004331 ORTHO05D004984 9.4e-105 384.4 325 64.0
AL4G38690 Arabidopsis lyrata HOM05D004331 ORTHO05D004984 1.2e-104 384.0 319 64.9
MELO3C022105.2 Cucumis melo HOM05D004331 ORTHO05D004984 2.1e-104 383.3 332 64.8
Sc11g0006070 Simmondsia chinensis HOM05D004331 ORTHO05D004984 4.7e-104 382.1 261 72.8
A05p01900 Brassica napus HOM05D004331 ORTHO05D004984 6.1e-104 381.7 326 63.8
BraA05t19188Z Brassica rapa HOM05D004331 ORTHO05D004984 6.1e-104 381.7 326 63.8
Ciclev10031884m.g Citrus clementina HOM05D004331 ORTHO05D004984 6.1e-104 381.7 286 70.3
Carub.0005s2321 Capsella rubella HOM05D004331 ORTHO05D004984 1.8e-103 380.2 263 73.0
FvH4_7g26230 Fragaria vesca HOM05D004331 ORTHO05D004984 1.8e-103 380.2 262 74.0
MD07G1237400 Malus domestica HOM05D004331 ORTHO05D004984 2.3e-103 379.8 294 68.4
AT3G56430 Arabidopsis thaliana HOM05D004331 ORTHO05D004984 3.0e-103 379.4 263 72.6
BcaC02g12734 Brassica carinata HOM05D004331 ORTHO05D004984 3.0e-103 379.4 258 73.3
FAN06G3213 Fragaria x ananassa HOM05D004331 ORTHO05D004984 3.0e-103 379.4 247 77.3
CARHR135900 Cardamine hirsuta HOM05D004331 ORTHO05D004984 4.0e-103 379.0 329 63.8
Dinv34508 Davidia involucrata HOM05D004331 ORTHO05D004984 5.2e-103 378.6 285 70.5
FAN10G3590 Fragaria x ananassa HOM05D004331 ORTHO05D004984 5.2e-103 378.6 256 75.4
Nitab4.5_0009756g0010 Nicotiana tabacum HOM05D004331 ORTHO05D004984 5.2e-103 378.6 284 69.0
MSTRG.156 Avicennia marina HOM05D004331 ORTHO05D004984 6.7e-103 378.3 296 66.6
Lalb_Chr08g0239281 Lupinus albus HOM05D004331 ORTHO05D004984 6.7e-103 378.3 330 68.2
AL5G37760 Arabidopsis lyrata HOM05D004331 ORTHO05D004984 1.2e-102 377.5 263 72.6
Sp4g23120 Schrenkiella parvula HOM05D004331 ORTHO05D004984 1.2e-102 377.5 321 64.2
Atru.chr12.214 Acer truncatum HOM05D004331 ORTHO05D004984 2.0e-102 376.7 314 65.9
TAR636G1774 Trochodendron aralioides HOM05D004331 ORTHO05D004984 2.0e-102 376.7 261 73.6
Aa31LG10G11310 Aethionema arabicum HOM05D004331 ORTHO05D004984 2.6e-102 376.3 292 67.8
BolC4t21871H Brassica oleracea HOM05D004331 ORTHO05D004984 2.6e-102 376.3 324 63.6
Migut.F00564 Erythranthe guttata HOM05D004331 ORTHO05D004984 3.3e-102 375.9 335 62.1
Gohir.D10G184000 Gossypium hirsutum HOM05D004331 ORTHO05D004984 4.4e-102 375.6 296 66.9
Gorai.011G206200 Gossypium raimondii HOM05D004331 ORTHO05D004984 4.4e-102 375.6 296 66.9
Thhalv10016808m.g Eutrema salsugineum HOM05D004331 ORTHO05D004984 5.7e-102 375.2 320 64.7
Potri.019G062200 Populus trichocarpa HOM05D004331 ORTHO05D004984 9.7e-102 374.4 311 66.6
Sp5g06060 Schrenkiella parvula HOM05D004331 ORTHO05D004984 9.7e-102 374.4 259 72.6
RcHm_v2.0_Chr1g0372681 Rosa chinensis HOM05D004331 ORTHO05D004984 1.7e-101 373.6 317 65.6
Peaxi162Scf00073g02119 Petunia axillaris HOM05D004331 ORTHO05D004984 2.8e-101 372.9 329 62.0
Thhalv10006036m.g Eutrema salsugineum HOM05D004331 ORTHO05D004984 4.8e-101 372.1 256 73.8
Hund13431 Selenicereus undatus HOM05D004331 ORTHO05D004984 6.3e-101 371.7 266 71.8
Sabra19G0075700 Salix brachista HOM05D004331 ORTHO05D004984 1.4e-100 370.5 327 63.9
CARHR166560 Cardamine hirsuta HOM05D004331 ORTHO05D004984 3.1e-100 369.4 256 72.7
THA.LOC104814366 Tarenaya hassleriana HOM05D004331 ORTHO05D004984 4.1e-100 369.0 324 63.0
THA.LOC104824369 Tarenaya hassleriana HOM05D004331 ORTHO05D004984 4.1e-100 369.0 318 63.8
Eucgr.L02349 Eucalyptus grandis HOM05D004331 ORTHO05D004984 5.3e-100 368.6 264 71.6
Sabra19G0081100 Salix brachista HOM05D004331 ORTHO05D004984 7.0e-100 368.2 327 63.6
Thecc.10G186200 Theobroma cacao HOM05D004331 ORTHO05D004984 3.5e-99 365.9 300 67.0
PGR142G0580 Punica granatum HOM05D004331 ORTHO05D004984 7.7e-99 364.8 281 68.7
Actinidia01013 Actinidia chinensis HOM05D004331 ORTHO05D004984 1.0e-98 364.4 309 64.4
Gohir.A10G177400 Gossypium hirsutum HOM05D004331 ORTHO05D004984 1.3e-98 364.0 293 66.2
HanXRQChr07g0204811 Helianthus annuus HOM05D004331 ORTHO05D004984 1.7e-98 363.6 332 60.2
COL.COLO4_19485 Corchorus olitorius HOM05D004331 ORTHO05D004984 2.9e-98 362.8 269 71.0
Hma1.2p1_0264F.1_g105850 Hydrangea macrophylla HOM05D004331 ORTHO05D004984 2.9e-98 362.8 308 64.6
CSS0028422 Camellia sinensis var. sinensis HOM05D004331 ORTHO05D004984 5.0e-98 362.1 256 71.9
Lj1A969T93 Lonicera japonica HOM05D004331 ORTHO05D004984 5.0e-98 362.1 310 63.2
MBI15_g36678_MAGBIO Magnolia biondii HOM05D004331 ORTHO05D004984 5.0e-98 362.1 259 74.9
EL10Ac2g02684 Beta vulgaris HOM05D004331 ORTHO05D004984 6.5e-98 361.7 261 70.9
Eucgr.G03152 Eucalyptus grandis HOM05D004331 ORTHO05D004984 1.1e-97 360.9 248 73.0
Sopen03g025450 Solanum pennellii HOM05D004331 ORTHO05D004984 1.1e-97 360.9 294 66.0
AUR62032546 Chenopodium quinoa HOM05D004331 ORTHO05D004984 1.5e-97 360.5 238 74.4
CAN.G30.2 Capsicum annuum HOM05D004331 ORTHO05D004984 2.5e-97 359.8 248 73.4
Nn5g26801 Nelumbo nucifera HOM05D004331 ORTHO05D004984 2.5e-97 359.8 253 71.1
Solyc03g095470.3 Solanum lycopersicum HOM05D004331 ORTHO05D004984 2.5e-97 359.8 294 65.6
SGA_v2.0_scaffold397G50761 Striga asiatica HOM05D004331 ORTHO05D004984 2.5e-97 359.8 282 67.0
Actinidia07780 Actinidia chinensis HOM05D004331 ORTHO05D004984 5.5e-97 358.6 261 71.6
Lsat_1_v5_gn_2_127600 Lactuca sativa HOM05D004331 ORTHO05D004984 5.5e-97 358.6 257 70.8
A09p49380 Brassica napus HOM05D004331 ORTHO05D004984 7.2e-97 358.2 232 75.4
BraA09t40391Z Brassica rapa HOM05D004331 ORTHO05D004984 7.2e-97 358.2 232 75.4
PGSC0003DMG400005253 Solanum tuberosum HOM05D004331 ORTHO05D004984 2.1e-96 356.7 291 65.6
SalBow3G0869 Salvia bowleyana HOM05D004331 ORTHO05D004984 2.3e-95 353.2 251 71.3
DCAR_020157 Daucus carota HOM05D004331 ORTHO05D004984 8.8e-95 351.3 313 60.1
ATR1127G084 Amborella trichopoda HOM05D004331 ORTHO05D004984 1.5e-94 350.5 283 65.7
Aqoxy4G03301 Aquilegia oxysepala HOM05D004331 ORTHO05D004984 7.5e-94 348.2 248 70.6
vmacro09950 Vaccinium macrocarpon HOM05D004331 ORTHO05D004984 1.7e-93 347.1 351 56.4
Rhsim09G0186700 Rhododendron simsii HOM05D004331 ORTHO05D004984 2.8e-93 346.3 225 75.6
BolC8t50795H Brassica oleracea HOM05D004331 ORTHO05D004984 6.3e-93 345.1 215 77.7
Os01g0168300 Oryza sativa ssp. japonica HOM05D004331 ORTHO05D004984 1.8e-92 343.6 275 66.5
PSO017G4126 Papaver somniferum HOM05D004331 ORTHO05D004984 2.0e-91 340.1 283 68.6
SEGI_36006 Sequoiadendron giganteum HOM05D004331 ORTHO05D004984 4.5e-91 339.0 246 69.1
unitig_88.g27825 Utricularia gibba HOM05D004331 ORTHO05D004984 1.0e-90 337.8 252 67.9
PSO170G2208 Papaver somniferum HOM05D004331 ORTHO05D004984 1.2e-88 330.9 265 69.1
HPP92_012570 Vanilla planifolia HOM05D004331 ORTHO05D004984 6.1e-88 328.6 239 68.6
Dinv21866 Davidia involucrata HOM05D004331 ORTHO05D004984 1.0e-87 327.8 199 80.4
ECA238G1814 Erigeron canadensis HOM05D004331 ORTHO05D004984 1.4e-87 327.4 219 72.6
SGA_v2.0_scaffold60G20876 Striga asiatica HOM05D004331 ORTHO05D004984 6.8e-87 325.1 268 62.3
AagrBONN_evm.TU.Sc2ySwM_340.90 Anthoceros agrestis HOM05D004331 ORTHO05D004984 2.9e-82 309.7 231 66.7
FAN01G2544 Fragaria x ananassa HOM05D004331 ORTHO05D004984 2.5e-81 306.6 179 83.8
Pp3c7_18440 Physcomitrium patens HOM05D004331 ORTHO05D004984 2.5e-81 306.6 237 65.4
GSVIVG01032862001 Vitis vinifera HOM05D004331 ORTHO05D004984 1.0e-79 301.2 178 82.6
BcaC07g39957 Brassica carinata HOM05D004331 ORTHO05D004984 4.0e-79 299.3 248 63.7
Mapoly0158s0020 Marchantia polymorpha HOM05D004331 ORTHO05D004984 4.0e-79 299.3 318 52.2
Cc02_g05110 Coffea canephora HOM05D004331 ORTHO05D004984 2.0e-78 297.0 179 81.6
Pp3c1_5190 Physcomitrium patens HOM05D004331 ORTHO05D004984 1.3e-77 294.3 237 62.4
Actinidia13632 Actinidia chinensis HOM05D004331 ORTHO05D004984 1.0e-74 284.6 247 62.8
C08p31740 Brassica napus HOM05D004331 ORTHO05D004984 1.0e-74 284.6 248 64.1
SMO361G0183 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 6.2e-72 275.4 255 53.7
SMO199G0115 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 1.8e-71 273.9 256 53.1
CBR_g29882 Chara braunii HOM05D004331 ORTHO05D004984 4.4e-70 269.2 223 60.1
CiPaw.02G199300 Carya illinoinensis HOM05D004331 ORTHO05D004984 1.3e-69 267.7 234 66.2
Oeu039397.2 Olea europaea HOM05D004331 ORTHO05D004984 2.2e-69 266.9 176 76.7
Nitab4.5_0018056g0010 Nicotiana tabacum HOM05D004331 ORTHO05D004984 3.0e-66 256.5 234 61.1
AUR62030578 Chenopodium quinoa HOM05D004331 ORTHO05D004984 2.5e-65 253.4 155 78.7
Zm00001eb336450 Zea mays HOM05D004331 ORTHO05D004984 3.4e-62 243.0 153 77.8
CiPaw.01G307700 Carya illinoinensis HOM05D004331 ORTHO05D004984 6.4e-61 238.8 169 76.3
Ah.10g029610 Amaranthus hybridus HOM05D000033 ORTHO05D000913 2.1e-56 223.8 139 78.4
Prupe.2G266500 Prunus persica HOM05D004331 ORTHO05D004984 1.9e-49 200.7 278 45.7
Manes.03G048500 Manihot esculenta HOM05D004331 ORTHO05D004984 2.5e-49 200.3 313 42.5
SMO361G0787 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 3.3e-49 199.9 224 45.1
SMO361G0173 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 1.2e-48 198.0 224 44.6
Carub.0004s2310 Capsella rubella HOM05D004331 ORTHO05D004984 3.6e-48 196.4 324 43.5
BcaC04g21857 Brassica carinata HOM05D004331 ORTHO05D004984 8.1e-48 195.3 141 70.2
BcaC09g50949 Brassica carinata HOM05D004331 ORTHO05D004984 1.1e-47 194.9 141 70.9
BcaC02g11378 Brassica carinata HOM05D004331 ORTHO05D004984 5.2e-47 192.6 141 70.2
C04p16400 Brassica napus HOM05D004331 ORTHO05D004984 5.2e-47 192.6 141 70.2
BcaC09g50388 Brassica carinata HOM05D004331 ORTHO05D004984 9.0e-47 191.8 112 81.2
C09p26570 Brassica napus HOM05D004331 ORTHO05D004984 9.0e-47 191.8 141 69.5
BolC9t55553H Brassica oleracea HOM05D004331 ORTHO05D004984 9.0e-47 191.8 141 69.5
BolC1t02551H Brassica oleracea HOM05D004331 ORTHO05D004984 4.4e-46 189.5 112 80.4
C01p26060 Brassica napus HOM05D004331 ORTHO05D004984 4.9e-45 186.0 112 79.5
C01p18940 Brassica napus HOM05D004331 ORTHO05D004984 5.6e-41 172.6 102 79.4
BolC1t01820H Brassica oleracea HOM05D004331 ORTHO05D004984 5.6e-41 172.6 102 79.4
MSTRG.8387 Avicennia marina HOM05D004331 ORTHO05D004984 2.8e-40 170.2 259 42.1
Cre05.g232752 Chlamydomonas reinhardtii HOM05D004331 ORTHO05D004984 8.1e-40 168.7 265 37.7
PRCOL_00001688 Prasinoderma coloniale HOM05D004331 ORTHO05D004984 1.5e-38 164.5 254 40.6
BcaC01g00580 Brassica carinata HOM05D003032 ORTHO05D003456 1.0e-34 151.8 113 72.6
C03p81590 Brassica napus HOM05D004331 ORTHO05D004984 1.0e-34 151.8 113 72.6
BolC3t20429H Brassica oleracea HOM05D004331 ORTHO05D004984 1.0e-34 151.8 113 72.6
BcaC04g23398 Brassica carinata HOM05D004331 ORTHO05D004984 1.9e-33 147.5 110 68.2
Actinidia31642 Actinidia chinensis HOM05D004331 ORTHO05D004984 3.3e-33 146.7 163 54.6
SHI31864 Sapria himalayana HOM05D004331 ORTHO05D004984 6.2e-32 142.5 91 76.9
HPP92_012539 Vanilla planifolia HOM05D004331 ORTHO05D004984 8.4e-29 132.1 127 57.5
CiPaw.01G307900 Carya illinoinensis HOM05D004331 ORTHO05D004984 7.9e-27 125.6 106 68.9
Eucgr.G03162 Eucalyptus grandis HOM05D004331 ORTHO05D004984 4.3e-25 119.8 89 71.9
Ah.10g029620 Amaranthus hybridus HOM05D004331 ORTHO05D004984 3.7e-24 116.7 84 69.0
MBI15_g10655_MAGBIO Magnolia biondii HOM05D004331 ORTHO05D004984 1.1e-23 115.2 107 59.8
BolC9t53789H Brassica oleracea HOM05D004331 ORTHO05D004984 1.8e-23 114.4 63 88.9
AUR62030577 Chenopodium quinoa HOM05D004331 ORTHO05D004984 1.8e-23 114.4 107 58.9
VMungo0540G1227 Vigna mungo HOM05D004331 ORTHO05D004984 5.8e-22 109.4 89 68.5
SHI31863 Sapria himalayana HOM05D004331 ORTHO05D004984 8.4e-21 105.5 65 73.8
Zm00001eb123190 Zea mays HOM05D004331 ORTHO05D004984 7.9e-19 99.0 93 57.0
Aqoxy4G02083 Aquilegia oxysepala HOM05D004331 ORTHO05D004984 1.0e-18 98.6 63 71.4
MCO04G099 Micromonas commoda HOM05D004331 ORTHO05D004984 2.5e-17 94.0 196 31.1
SHI31865 Sapria himalayana HOM05D004331 ORTHO05D004984 7.4e-17 92.4 82 51.2
BraA04t18575Z Brassica rapa HOM05D004331 ORTHO05D016805 6.5e-13 79.3 44 84.1
BolC4t28360H Brassica oleracea HOM05D004331 ORTHO05D004984 2.3e-10 70.9 68 52.9
C08p13890 Brassica napus HOM05D013285 ORTHO05D004984 3.0e-10 70.5 47 72.3


User provided reference genes

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