Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_29445_v3 Cicer arietinum L. HOM05D004157 ORTHO05D148328 8.2e-266 919.8 469 100.0
Sed0017382 Sechium edule HOM05D004157 ORTHO05D004860 3.6e-11 73.9 232 29.3
Solyc01g111060.4 Solanum lycopersicum HOM05D004157 ORTHO05D004860 6.7e-10 69.7 173 28.9
HanXRQChr10g0294891 Helianthus annuus HOM05D004157 ORTHO05D004860 8.8e-10 69.3 191 29.8
Sed0001494 Sechium edule HOM05D000447 ORTHO05D000315 1.1e-09 68.9 232 28.0
PGSC0003DMG400001636 Solanum tuberosum HOM05D004157 ORTHO05D004860 1.1e-09 68.9 191 27.2
Zm00001eb036610 Zea mays HOM05D004157 ORTHO05D004860 1.5e-09 68.6 187 28.9
Sopen01g053120 Solanum pennellii HOM05D004157 ORTHO05D004860 2.6e-09 67.8 173 28.3
Ah.01g009470 Amaranthus hybridus HOM05D004157 ORTHO05D004860 3.3e-09 67.4 191 26.7
AagrBONN_evm.TU.Sc2ySwM_368.2286 Anthoceros agrestis HOM05D004157 ORTHO05D004860 3.3e-09 67.4 198 27.8
Nitab4.5_0000283g0220 Nicotiana tabacum HOM05D004157 ORTHO05D004860 4.4e-09 67.0 185 27.6
Peaxi162Scf00362g01054 Petunia axillaris HOM05D004157 ORTHO05D004860 4.4e-09 67.0 162 27.8
Lj8A587G32 Lonicera japonica HOM05D001491 ORTHO05D001443 5.7e-09 66.6 182 27.5
CAN.G588.18 Capsicum annuum HOM05D004157 ORTHO05D004860 7.5e-09 66.2 191 26.7
Mapoly0026s0093 Marchantia polymorpha HOM05D004157 ORTHO05D004860 7.5e-09 66.2 189 27.0
Os06g0112200 Oryza sativa ssp. japonica HOM05D004157 ORTHO05D004860 7.5e-09 66.2 222 26.6
Sc18g0006720 Simmondsia chinensis HOM05D004157 ORTHO05D004860 7.5e-09 66.2 240 25.4
ECA234G4736 Erigeron canadensis HOM05D004157 ORTHO05D004860 1.3e-08 65.5 191 28.3
SHI05673 Sapria himalayana HOM05D004157 ORTHO05D004860 1.3e-08 65.5 209 27.3
MELO3C013382.2 Cucumis melo HOM05D004157 ORTHO05D004860 1.7e-08 65.1 240 27.1
MCO15G557 Micromonas commoda HOM05D004157 ORTHO05D004860 1.7e-08 65.1 214 27.1
ClCG02G004360 Citrullus lanatus HOM05D000447 ORTHO05D000315 3.7e-08 63.9 183 29.0
Atru.chr5.3210 Acer truncatum HOM05D004157 ORTHO05D004860 4.8e-08 63.5 196 28.1
CiPaw.06G125600 Carya illinoinensis HOM05D000447 ORTHO05D000315 4.8e-08 63.5 183 27.3
PGR042G1356 Punica granatum HOM05D004157 ORTHO05D004860 4.8e-08 63.5 240 27.9
Glyma.04G005900 Glycine max HOM05D004157 ORTHO05D004860 6.3e-08 63.2 200 26.5
Nitab4.5_0000151g0310 Nicotiana tabacum HOM05D001491 ORTHO05D001443 6.3e-08 63.2 197 26.4
TWI79G0156 Tripterygium wilfordii HOM05D004157 ORTHO05D004860 8.2e-08 62.8 173 28.9
GSVIVG01024109001 Vitis vinifera HOM05D004157 ORTHO05D004860 8.2e-08 62.8 191 26.7
Actinidia32087 Actinidia chinensis HOM05D004157 ORTHO05D004860 1.1e-07 62.4 231 25.5
CsaV3_7G000760 Cucumis sativus L. HOM05D004157 ORTHO05D004860 1.1e-07 62.4 191 27.7
Eucgr.G01748 Eucalyptus grandis HOM05D004157 ORTHO05D004860 1.1e-07 62.4 232 26.7
unitig_0.g2353 Utricularia gibba HOM05D004157 ORTHO05D004860 1.1e-07 62.4 172 28.5
CANSAT25G0852 Cannabis sativa HOM05D004157 ORTHO05D004860 1.4e-07 62.0 191 26.7
Actinidia00586 Actinidia chinensis HOM05D004157 ORTHO05D004860 1.8e-07 61.6 198 26.3
Lsat_1_v5_gn_3_45521 Lactuca sativa HOM05D004157 ORTHO05D004860 1.8e-07 61.6 209 26.3
Lj9A389T64 Lonicera japonica HOM05D004157 ORTHO05D004860 1.8e-07 61.6 162 26.5
Lj1g0011325 Lotus japonicus HOM05D004157 ORTHO05D004860 1.8e-07 61.6 207 26.6
Pp3s30_800 Physcomitrium patens HOM05D000246 ORTHO05D001057 1.8e-07 61.6 214 22.4
HPP92_002547 Vanilla planifolia HOM05D004157 ORTHO05D004860 2.4e-07 61.2 173 26.6
VMungo1309G1201 Vigna mungo HOM05D004157 ORTHO05D004860 2.4e-07 61.2 200 26.5
Cfa005173 Carpinus fangiana HOM05D004157 ORTHO05D004860 3.1e-07 60.8 191 27.7
THA.LOC104819635 Tarenaya hassleriana HOM05D004157 ORTHO05D004860 3.1e-07 60.8 191 26.7
TWI75G1232 Tripterygium wilfordii HOM05D004157 ORTHO05D004860 3.1e-07 60.8 173 27.2
vmacro22690 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 3.1e-07 60.8 196 29.6
AUR62013103 Chenopodium quinoa HOM05D004157 ORTHO05D004860 4.1e-07 60.5 173 27.7
Medtr3g117700 Medicago truncatula HOM05D004157 ORTHO05D004860 4.1e-07 60.5 200 25.5
Phvul.009G000600 Phaseolus vulgaris HOM05D004157 ORTHO05D004860 4.1e-07 60.5 200 25.5
PGR142G1140 Punica granatum HOM05D004157 ORTHO05D004860 4.1e-07 60.5 191 25.7
Hund00051 Selenicereus undatus HOM05D004157 ORTHO05D004860 4.1e-07 60.5 191 27.2
arahy.Tifrunner.gnm1.ann1.391TM2 Arachis hypogaea HOM05D004157 ORTHO05D004860 5.3e-07 60.1 217 25.3
arahy.Tifrunner.gnm1.ann1.66CLCN Arachis hypogaea HOM05D004157 ORTHO05D004860 5.3e-07 60.1 217 25.3
Lalb_Chr11g0061251 Lupinus albus HOM05D004157 ORTHO05D004860 5.3e-07 60.1 185 27.0
Prupe.8G159400 Prunus persica HOM05D004157 ORTHO05D004860 5.3e-07 60.1 166 27.7
Ca_15317_v3 Cicer arietinum L. HOM05D000600 ORTHO05D004860 7.0e-07 59.7 200 26.5
Cc02_g16620 Coffea canephora HOM05D004157 ORTHO05D004860 7.0e-07 59.7 185 27.6
DCAR_003693 Daucus carota HOM05D004157 ORTHO05D004860 7.0e-07 59.7 209 26.8
HanXRQChr11g0346651 Helianthus annuus HOM05D004157 ORTHO05D004860 7.0e-07 59.7 167 26.9
MD10G1116600 Malus domestica HOM05D004157 ORTHO05D004860 7.0e-07 59.7 209 25.8
MSTRG.5432 Avicennia marina HOM05D004157 ORTHO05D004860 9.1e-07 59.3 186 25.3
Zm00001eb175180 Zea mays HOM05D004157 ORTHO05D004860 9.1e-07 59.3 188 26.1
FAN20G1131 Fragaria x ananassa HOM05D004157 ORTHO05D004860 1.6e-06 58.5 206 24.3
Glyma.06G005600 Glycine max HOM05D004157 ORTHO05D004860 1.6e-06 58.5 200 24.5
Manes.04G078800 Manihot esculenta HOM05D004157 ORTHO05D004860 1.6e-06 58.5 181 26.5
PSO541G4423 Papaver somniferum HOM05D004157 ORTHO05D004860 1.6e-06 58.5 206 23.8
TPR.G38481 Trifolium pratense HOM05D004157 ORTHO05D004860 1.6e-06 58.5 175 25.7
Migut.I00211 Erythranthe guttata HOM05D004157 ORTHO05D004860 2.0e-06 58.2 190 25.8
Lj5A185T60 Lonicera japonica HOM05D004157 ORTHO05D004860 2.0e-06 58.2 191 25.1
PSO675G3214 Papaver somniferum HOM05D004157 ORTHO05D004860 2.7e-06 57.8 206 23.8
EL10Ac9g21458 Beta vulgaris HOM05D004157 ORTHO05D004860 3.5e-06 57.4 173 27.2
COL.COLO4_17245 Corchorus olitorius HOM05D004157 ORTHO05D004860 3.5e-06 57.4 181 25.4
Thhalv10026821m.g Eutrema salsugineum HOM05D004157 ORTHO05D004860 3.5e-06 57.4 196 26.5
FvH4_2g02150 Fragaria vesca HOM05D004157 ORTHO05D004860 3.5e-06 57.4 191 24.6
FAN24G0875 Fragaria x ananassa HOM05D004157 ORTHO05D004860 3.5e-06 57.4 191 24.6
Nn5g30153 Nelumbo nucifera HOM05D004157 ORTHO05D004860 3.5e-06 57.4 191 24.6
BcaNung00437 Brassica carinata HOM05D001491 ORTHO05D001443 4.5e-06 57.0 284 23.9
BcaNung02895 Brassica carinata HOM05D001491 ORTHO05D001443 5.9e-06 56.6 75 45.3
BcaNung02897 Brassica carinata HOM05D001491 ORTHO05D001443 5.9e-06 56.6 75 45.3
C07p56540 Brassica napus HOM05D001491 ORTHO05D001443 5.9e-06 56.6 75 45.3
BolC7t46131H Brassica oleracea HOM05D001491 ORTHO05D001443 5.9e-06 56.6 75 45.3
Oeu002957.1 Olea europaea HOM05D004157 ORTHO05D004860 5.9e-06 56.6 195 25.6
TAR381G0601 Trochodendron aralioides HOM05D004157 ORTHO05D004860 5.9e-06 56.6 191 24.1
unitig_21.g20017 Utricularia gibba HOM05D004157 ORTHO05D004860 5.9e-06 56.6 165 29.7
vmacro17385 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 5.9e-06 56.6 177 26.6
Oeu055643.1 Olea europaea HOM05D004157 ORTHO05D004860 7.7e-06 56.2 195 26.2
Psat5g003520 Pisum sativum HOM05D004157 ORTHO05D004860 7.7e-06 56.2 181 26.0


User provided reference genes

Program Settings