Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_29435_v3 Cicer arietinum L. HOM05D006499 ORTHO05D007874 4.4e-220 767.7 394 100.0
CARHR190310 Cardamine hirsuta HOM05D006499 ORTHO05D007874 2.7e-12 77.4 164 31.1
BraA02t09053Z Brassica rapa HOM05D006499 ORTHO05D007874 4.6e-12 76.6 165 33.9
QL03p017519 Quercus lobata HOM05D006499 ORTHO05D007874 7.9e-12 75.9 157 30.6
QL03p017736 Quercus lobata HOM05D006499 ORTHO05D007874 7.9e-12 75.9 157 30.6
MELO3C011747.2 Cucumis melo HOM05D000045 ORTHO05D007874 1.0e-11 75.5 153 30.7
Pp3c12_9010 Physcomitrium patens HOM05D006499 ORTHO05D007874 1.0e-11 75.5 164 32.9
A02p41090 Brassica napus HOM05D006499 ORTHO05D007874 2.3e-11 74.3 165 33.3
Nitab4.5_0004301g0030 Nicotiana tabacum HOM05D006499 ORTHO05D007874 3.0e-11 73.9 159 29.6
Solyc01g007920.2 Solanum lycopersicum HOM05D006499 ORTHO05D007874 3.9e-11 73.6 186 28.0
AT5G23230 Arabidopsis thaliana HOM05D006499 ORTHO05D007874 5.1e-11 73.2 163 28.8
Prupe.1G348500 Prunus persica HOM05D006499 ORTHO05D007874 5.1e-11 73.2 153 29.4
ClCG02G014040 Citrullus lanatus HOM05D006499 ORTHO05D007874 6.7e-11 72.8 153 30.1
CsaV3_5G006120 Cucumis sativus L. HOM05D000045 ORTHO05D007874 6.7e-11 72.8 153 30.1
Thhalv10005281m.g Eutrema salsugineum HOM05D006499 ORTHO05D007874 6.7e-11 72.8 165 31.5
Sp2g23920 Schrenkiella parvula HOM05D006499 ORTHO05D007874 6.7e-11 72.8 168 30.4
Sopen01g003460 Solanum pennellii HOM05D006499 ORTHO05D007874 6.7e-11 72.8 186 28.0
Sed0001124 Sechium edule HOM05D006499 ORTHO05D007874 8.7e-11 72.4 153 30.7
Psat6g099520 Pisum sativum HOM05D006499 ORTHO05D007874 1.1e-10 72.0 155 29.7
Oeu012342.1 Olea europaea HOM05D006499 ORTHO05D007874 1.5e-10 71.6 164 29.9
Aa31LG11G2680 Aethionema arabicum HOM05D006499 ORTHO05D007874 1.9e-10 71.2 166 28.3
Glyma.09G283200 Glycine max HOM05D006499 ORTHO05D007874 1.9e-10 71.2 155 29.0
Medtr1g038530 Medicago truncatula HOM05D006499 ORTHO05D007874 1.9e-10 71.2 155 29.7
PGSC0003DMG400016411 Solanum tuberosum HOM05D006499 ORTHO05D007874 1.9e-10 71.2 159 28.3
C02p60950 Brassica napus HOM05D006499 ORTHO05D007874 2.5e-10 70.9 167 32.3
BolC2t12145H Brassica oleracea HOM05D006499 ORTHO05D007874 2.5e-10 70.9 167 32.3
BcaC03g18032 Brassica carinata HOM05D006499 ORTHO05D007874 3.3e-10 70.5 167 31.1
MD16G1003500 Malus domestica HOM05D006499 ORTHO05D007874 3.3e-10 70.5 155 29.7
Rhsim05G0006600 Rhododendron simsii HOM05D006499 ORTHO05D007874 3.3e-10 70.5 158 28.5
Migut.H01291 Erythranthe guttata HOM05D006499 ORTHO05D007874 4.3e-10 70.1 155 27.7
Peaxi162Scf00021g01915 Petunia axillaris HOM05D006499 ORTHO05D007874 4.3e-10 70.1 159 28.3
BcaB07g29862 Brassica carinata HOM05D006499 ORTHO05D007874 5.7e-10 69.7 167 31.1
Lalb_Chr10g0094911 Lupinus albus HOM05D006499 ORTHO05D007874 5.7e-10 69.7 155 29.7
COL.COLO4_33044 Corchorus olitorius HOM05D006499 ORTHO05D007874 7.4e-10 69.3 155 30.3
Haze_11761 Corylus avellana HOM05D006499 ORTHO05D007874 7.4e-10 69.3 158 28.5
AL6G34450 Arabidopsis lyrata HOM05D006499 ORTHO05D007874 9.7e-10 68.9 162 27.8
Carub.0006s2100 Capsella rubella HOM05D006499 ORTHO05D007874 9.7e-10 68.9 165 30.3
Medtr1g037830 Medicago truncatula HOM05D006499 ORTHO05D007874 9.7e-10 68.9 153 28.1
MSTRG.12232 Avicennia marina HOM05D006499 ORTHO05D007874 1.3e-09 68.6 162 30.9
Nitab4.5_0000069g0350 Nicotiana tabacum HOM05D006499 ORTHO05D007874 1.3e-09 68.6 159 28.3
TAR622G1217 Trochodendron aralioides HOM05D006499 ORTHO05D007874 1.3e-09 68.6 156 31.4
vmacro04318 Vaccinium macrocarpon HOM05D006499 ORTHO05D007874 1.3e-09 68.6 158 28.5
Lalb_Chr04g0258971 Lupinus albus HOM05D006499 ORTHO05D007874 2.8e-09 67.4 155 29.7
RcHm_v2.0_Chr4g0446811 Rosa chinensis HOM05D006499 ORTHO05D007874 2.8e-09 67.4 155 29.0
SMO116G0488 Selaginella moellendorffii HOM05D006499 ORTHO05D007874 2.8e-09 67.4 172 26.7
AagrBONN_evm.TU.Sc2ySwM_344.3677 Anthoceros agrestis HOM05D006499 ORTHO05D007874 3.7e-09 67.0 189 27.5
Cfa026003 Carpinus fangiana HOM05D006499 ORTHO05D007874 3.7e-09 67.0 182 29.7
Cc02_g20760 Coffea canephora HOM05D006499 ORTHO05D007874 3.7e-09 67.0 158 30.4
Lj6P712T24 Lonicera japonica HOM05D006499 ORTHO05D007874 3.7e-09 67.0 141 27.7
MBI06_g20294_MAGBIO Magnolia biondii HOM05D006499 ORTHO05D007874 3.7e-09 67.0 168 29.8
unitig_578.g16567 Utricularia gibba HOM05D006499 ORTHO05D007874 4.8e-09 66.6 157 29.9
SGA_v2.0_scaffold49G18416 Striga asiatica HOM05D006499 ORTHO05D007874 6.3e-09 66.2 159 28.9
TPR.G29797 Trifolium pratense HOM05D006499 ORTHO05D007874 8.2e-09 65.9 81 35.8
ATR0618G206 Amborella trichopoda HOM05D006499 ORTHO05D007874 1.1e-08 65.5 161 28.6
AT5G23220 Arabidopsis thaliana HOM05D006499 ORTHO05D007874 1.1e-08 65.5 163 27.0
HPP92_005057 Vanilla planifolia HOM05D006499 ORTHO05D007874 1.1e-08 65.5 167 25.7
Cfa008745 Carpinus fangiana HOM05D006499 ORTHO05D007874 1.4e-08 65.1 158 27.8
Ciclev10032745m.g Citrus clementina HOM05D006499 ORTHO05D007874 1.4e-08 65.1 156 28.8
FAN07G1092 Fragaria x ananassa HOM05D006499 ORTHO05D007874 1.4e-08 65.1 154 28.6
Lsat_1_v5_gn_8_80081 Lactuca sativa HOM05D006499 ORTHO05D007874 1.4e-08 65.1 164 25.0
Lj6P717T75 Lonicera japonica HOM05D006499 ORTHO05D007874 1.4e-08 65.1 141 27.0
Nn4g24968 Nelumbo nucifera HOM05D006499 ORTHO05D007874 1.4e-08 65.1 158 29.7
Phvul.003G004400 Phaseolus vulgaris HOM05D006499 ORTHO05D007874 1.4e-08 65.1 156 27.6
Actinidia13714 Actinidia chinensis HOM05D006499 ORTHO05D007874 1.8e-08 64.7 157 29.3
CiPaw.06G061000 Carya illinoinensis HOM05D006499 ORTHO05D007874 1.8e-08 64.7 154 27.9
Ca_05122_v3 Cicer arietinum L. HOM05D006499 ORTHO05D007874 1.8e-08 64.7 155 28.4
COL.COLO4_06169 Corchorus olitorius HOM05D006499 ORTHO05D007874 2.4e-08 64.3 100 35.0
Aqoxy3G00285 Aquilegia oxysepala HOM05D006499 ORTHO05D007874 3.1e-08 63.9 157 28.0
AUR62017708 Chenopodium quinoa HOM05D006499 ORTHO05D007874 4.1e-08 63.5 79 38.0
AUR62032973 Chenopodium quinoa HOM05D006499 ORTHO05D007874 5.3e-08 63.2 176 26.7
THA.LOC104800852 Tarenaya hassleriana HOM05D006499 ORTHO05D007874 5.3e-08 63.2 169 30.2
DCAR_026894 Daucus carota HOM05D006499 ORTHO05D007874 6.9e-08 62.8 160 25.0
FAN12G4256 Fragaria x ananassa HOM05D006499 ORTHO05D007874 6.9e-08 62.8 157 29.3
Manes.15G079500 Manihot esculenta HOM05D006499 ORTHO05D007874 6.9e-08 62.8 166 25.9
Os04g0525800 Oryza sativa ssp. japonica HOM05D006499 ORTHO05D007874 6.9e-08 62.8 167 25.7
SEGI_40434 Sequoiadendron giganteum HOM05D006499 ORTHO05D007874 1.2e-07 62.0 83 34.9
Duzib132G0405 Durio zibethinus HOM05D006499 ORTHO05D007874 1.5e-07 61.6 161 26.1
Gohir.D02G188400 Gossypium hirsutum HOM05D006499 ORTHO05D007874 1.5e-07 61.6 147 28.6
Gorai.005G211100 Gossypium raimondii HOM05D006499 ORTHO05D007874 1.5e-07 61.6 147 28.6
Nitab4.5_0004205g0010 Nicotiana tabacum HOM05D005658 ORTHO05D006989 1.5e-07 61.6 170 32.4
Potri.003G003300 Populus trichocarpa HOM05D006499 ORTHO05D007874 1.5e-07 61.6 173 26.0
AL3G28880 Arabidopsis lyrata HOM05D005658 ORTHO05D006989 2.0e-07 61.2 183 28.4
AT3G16190 Arabidopsis thaliana HOM05D005658 ORTHO05D006989 2.6e-07 60.8 183 29.0
Gohir.A03G165200 Gossypium hirsutum HOM05D006499 ORTHO05D007874 2.6e-07 60.8 148 26.4
Nitab4.5_0001315g0030 Nicotiana tabacum HOM05D005658 ORTHO05D006989 2.6e-07 60.8 170 31.2
EL10Ac9g22960 Beta vulgaris HOM05D006499 ORTHO05D007874 3.4e-07 60.5 175 26.3
CSS0024171 Camellia sinensis var. sinensis HOM05D006499 ORTHO05D007874 5.9e-07 59.7 154 25.3
Solyc03g120540.3 Solanum lycopersicum HOM05D005658 ORTHO05D006989 5.9e-07 59.7 171 30.4
Sopen03g039400 Solanum pennellii HOM05D005658 ORTHO05D006989 7.7e-07 59.3 171 30.4
Thecc.02G158700 Theobroma cacao HOM05D006499 ORTHO05D007874 7.7e-07 59.3 156 25.6
Zm00001eb076800 Zea mays HOM05D006499 ORTHO05D007874 7.7e-07 59.3 159 28.3
CANSAT01G2706 Cannabis sativa HOM05D006499 ORTHO05D007874 1.0e-06 58.9 194 25.3
TAR622G0494 Trochodendron aralioides HOM05D006499 ORTHO05D007874 1.3e-06 58.5 96 34.4
MSTRG.9467 Avicennia marina HOM05D005658 ORTHO05D006989 1.7e-06 58.2 170 27.6
Cc04_g02920 Coffea canephora HOM05D005658 ORTHO05D006989 1.7e-06 58.2 171 29.8
QL04p029592 Quercus lobata HOM05D006499 ORTHO05D007874 1.7e-06 58.2 64 37.5
Sc06g0006830 Simmondsia chinensis HOM05D006499 ORTHO05D007874 1.7e-06 58.2 134 28.4
arahy.Tifrunner.gnm1.ann1.BULB93 Arachis hypogaea HOM05D006499 ORTHO05D007874 2.2e-06 57.8 161 27.3
CAN.G438.34 Capsicum annuum HOM05D005658 ORTHO05D006989 2.2e-06 57.8 171 29.8
ECA236G1709 Erigeron canadensis HOM05D006499 ORTHO05D007874 2.2e-06 57.8 167 23.4
Sed0000814 Sechium edule HOM05D005658 ORTHO05D006989 2.2e-06 57.8 170 26.5
PGSC0003DMG400002629 Solanum tuberosum HOM05D005658 ORTHO05D006989 2.2e-06 57.8 170 29.4
Duzib132G0016 Durio zibethinus HOM05D006499 ORTHO05D007874 2.9e-06 57.4 159 25.2
Lj2g0027544 Lotus japonicus HOM05D006499 ORTHO05D007874 2.9e-06 57.4 162 27.2
Manes.04G130900 Manihot esculenta HOM05D005658 ORTHO05D006989 2.9e-06 57.4 170 30.0
arahy.Tifrunner.gnm1.ann1.U0P7JC Arachis hypogaea HOM05D000717 ORTHO05D000555 3.8e-06 57.0 159 25.8
PRCOL_00006077 Prasinoderma coloniale HOM05D006499 ORTHO05D007874 3.8e-06 57.0 169 28.4
Cre10.g448500 Chlamydomonas reinhardtii HOM05D006499 ORTHO05D007874 6.5e-06 56.2 70 35.7
CsaV3_7G033450 Cucumis sativus L. HOM05D005658 ORTHO05D006989 8.5e-06 55.8 173 28.9


User provided reference genes

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