Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_29365_v3 Cicer arietinum L. HOM05D005505 ORTHO05D006974 5.7e-161 570.9 286 100.0
SEGI_35699 Sequoiadendron giganteum HOM05D005505 ORTHO05D006974 2.5e-31 140.2 351 29.1
Pp3c26_12110 Physcomitrium patens HOM05D005505 ORTHO05D006974 1.6e-30 137.5 259 34.0
SMO351G0576 Selaginella moellendorffii HOM05D005505 ORTHO05D006974 4.7e-30 136.0 327 31.8
MCO15G051 Micromonas commoda HOM05D005505 ORTHO05D006974 3.0e-29 133.3 278 33.5
GSVIVG01012536001 Vitis vinifera HOM05D005505 ORTHO05D006974 8.8e-29 131.7 307 29.3
Mapoly0028s0013 Marchantia polymorpha HOM05D005505 ORTHO05D006974 3.7e-27 126.3 326 29.1
Oeu026858.1 Olea europaea HOM05D005505 ORTHO05D006974 4.8e-27 125.9 301 29.9
Aqoxy2G03778 Aquilegia oxysepala HOM05D005505 ORTHO05D006974 6.3e-27 125.6 324 28.7
Manes.03G149700 Manihot esculenta HOM05D005505 ORTHO05D006974 8.2e-27 125.2 347 28.0
Psat7g176120 Pisum sativum HOM05D005505 ORTHO05D006974 8.2e-27 125.2 345 28.1
TPR.G26848 Trifolium pratense HOM05D005505 ORTHO05D006974 8.2e-27 125.2 346 27.7
FAN18G0472 Fragaria x ananassa HOM05D005505 ORTHO05D006974 1.1e-26 124.8 345 27.2
FAN13G1424 Fragaria x ananassa HOM05D005505 ORTHO05D006974 1.8e-26 124.0 345 27.2
PSO017G4123 Papaver somniferum HOM05D005505 ORTHO05D006974 1.8e-26 124.0 331 28.1
Medtr2g060550 Medicago truncatula HOM05D005505 ORTHO05D006974 2.4e-26 123.6 346 27.7
PSO063G3796 Papaver somniferum HOM05D005505 ORTHO05D006974 3.1e-26 123.2 331 27.8
Phvul.008G135500 Phaseolus vulgaris HOM05D005505 ORTHO05D006974 5.3e-26 122.5 345 27.0
Lj1g0020537 Lotus japonicus HOM05D005505 ORTHO05D006974 9.1e-26 121.7 343 26.8
FvH4_5g03680 Fragaria vesca HOM05D005505 ORTHO05D006974 1.2e-25 121.3 345 28.4
FAN08G1440 Fragaria x ananassa HOM05D005505 ORTHO05D006974 1.6e-25 120.9 357 26.9
Glyma.08G345200 Glycine max HOM05D005505 ORTHO05D006974 1.6e-25 120.9 345 27.0
RcHm_v2.0_Chr7g0196051 Rosa chinensis HOM05D005505 ORTHO05D006974 1.6e-25 120.9 342 26.6
ATR0787G156 Amborella trichopoda HOM05D005505 ORTHO05D006974 2.0e-25 120.6 355 26.8
CiPaw.02G067600 Carya illinoinensis HOM05D005505 ORTHO05D006974 2.7e-25 120.2 348 26.1
CsaV3_4G006210 Cucumis sativus L. HOM05D005505 ORTHO05D006974 2.7e-25 120.2 344 26.7
FAN13G2718 Fragaria x ananassa HOM05D005505 ORTHO05D006974 2.7e-25 120.2 357 26.6
Sed0009691 Sechium edule HOM05D005505 ORTHO05D006974 2.7e-25 120.2 343 27.1
ClCG07G007730 Citrullus lanatus HOM05D005505 ORTHO05D006974 3.5e-25 119.8 345 27.2
CANSAT21G2364 Cannabis sativa HOM05D005505 ORTHO05D006974 4.5e-25 119.4 347 27.4
MELO3C016329.2 Cucumis melo HOM05D005505 ORTHO05D006974 4.5e-25 119.4 344 26.7
Nn8g40056 Nelumbo nucifera HOM05D005505 ORTHO05D006974 4.5e-25 119.4 344 26.7
Psat3g151840 Pisum sativum HOM05D005505 ORTHO05D006974 4.5e-25 119.4 346 27.2
Ca_07402_v3 Cicer arietinum L. HOM05D005505 ORTHO05D006974 5.9e-25 119.0 346 27.2
Sc24g0002560 Simmondsia chinensis HOM05D005505 ORTHO05D006974 5.9e-25 119.0 337 27.3
Lj5g0018216 Lotus japonicus HOM05D005505 ORTHO05D006974 7.7e-25 118.6 345 26.1
SGA_v2.0_scaffold57G20149 Striga asiatica HOM05D005505 ORTHO05D006974 7.7e-25 118.6 329 27.4
Lalb_Chr19g0126031 Lupinus albus HOM05D005505 ORTHO05D006974 1.0e-24 118.2 342 27.8
Potri.001G051200 Populus trichocarpa HOM05D005505 ORTHO05D006974 1.0e-24 118.2 348 25.9
Migut.G00632 Erythranthe guttata HOM05D005505 ORTHO05D006974 1.3e-24 117.9 333 26.7
Ciclev10004754m.g Citrus clementina HOM05D005505 ORTHO05D006974 1.7e-24 117.5 345 26.1
Gorai.006G220300 Gossypium raimondii HOM05D005505 ORTHO05D006974 1.7e-24 117.5 348 27.0
COL.COLO4_20306 Corchorus olitorius HOM05D005505 ORTHO05D006974 2.2e-24 117.1 347 26.2
HanXRQChr10g0278391 Helianthus annuus HOM05D005505 ORTHO05D006974 2.2e-24 117.1 343 26.5
Zm00001eb211070 Zea mays HOM05D005505 ORTHO05D006974 2.2e-24 117.1 354 28.0
Gohir.A09G202800 Gossypium hirsutum HOM05D005505 ORTHO05D006974 2.9e-24 116.7 348 27.0
SGA_v2.0_scaffold380G50374 Striga asiatica HOM05D005505 ORTHO05D006974 2.9e-24 116.7 329 27.1
ECA233G0503 Erigeron canadensis HOM05D005505 ORTHO05D006974 3.8e-24 116.3 344 26.7
Gohir.D09G196900 Gossypium hirsutum HOM05D005505 ORTHO05D006974 3.8e-24 116.3 348 26.7
unitig_32.g10868 Utricularia gibba HOM05D005505 ORTHO05D006974 5.0e-24 115.9 334 25.7
Prupe.5G110900 Prunus persica HOM05D005505 ORTHO05D006974 6.5e-24 115.5 343 25.9
MSTRG.9830 Avicennia marina HOM05D005505 ORTHO05D006974 8.5e-24 115.2 332 26.2
MD06G1096300 Malus domestica HOM05D005505 ORTHO05D006974 8.5e-24 115.2 342 26.6
Os03g0839100 Oryza sativa ssp. japonica HOM05D005505 ORTHO05D006974 8.5e-24 115.2 287 29.6
Duzib212G0911 Durio zibethinus HOM05D005505 ORTHO05D006974 1.1e-23 114.8 345 26.1
SalBow2G0189 Salvia bowleyana HOM05D005505 ORTHO05D006974 1.1e-23 114.8 332 26.2
Dinv38263 Davidia involucrata HOM05D005505 ORTHO05D006974 1.5e-23 114.4 283 27.9
FAN04G0744 Fragaria x ananassa HOM05D005505 ORTHO05D006974 2.5e-23 113.6 327 27.2
FAN04G1715 Fragaria x ananassa HOM05D005505 ORTHO05D006974 2.5e-23 113.6 327 27.2
Lalb_Chr03g0041191 Lupinus albus HOM05D005505 ORTHO05D006974 2.5e-23 113.6 346 25.7
QL09p050425 Quercus lobata HOM05D005505 ORTHO05D006974 3.2e-23 113.2 348 26.7
TAR636G3130 Trochodendron aralioides HOM05D005505 ORTHO05D006974 3.2e-23 113.2 346 27.7
TWI53G0062 Tripterygium wilfordii HOM05D005505 ORTHO05D006974 4.2e-23 112.8 344 26.7
Eucgr.H00086 Eucalyptus grandis HOM05D005505 ORTHO05D006974 7.2e-23 112.1 343 26.2
Actinidia35954 Actinidia chinensis HOM05D005505 ORTHO05D006974 9.4e-23 111.7 347 27.1
arahy.Tifrunner.gnm1.ann1.ZRDJ5X Arachis hypogaea HOM05D005505 ORTHO05D006974 9.4e-23 111.7 348 25.3
Thecc.04G209900 Theobroma cacao HOM05D005505 ORTHO05D006974 9.4e-23 111.7 347 25.6
Atru.chr4.1761 Acer truncatum HOM05D005505 ORTHO05D006974 1.2e-22 111.3 284 28.9
AUR62025680 Chenopodium quinoa HOM05D005505 ORTHO05D006974 1.2e-22 111.3 275 29.8
Cc03_g07370 Coffea canephora HOM05D005505 ORTHO05D006974 1.2e-22 111.3 341 26.1
THA.LOC104821613 Tarenaya hassleriana HOM05D005505 ORTHO05D006974 1.2e-22 111.3 349 25.8
AUR62001295 Chenopodium quinoa HOM05D005505 ORTHO05D006974 1.6e-22 110.9 279 29.0
arahy.Tifrunner.gnm1.ann1.H9DAM7 Arachis hypogaea HOM05D005505 ORTHO05D006974 2.1e-22 110.5 348 25.0
EL10Ac7g18096 Beta vulgaris HOM05D005505 ORTHO05D006974 2.1e-22 110.5 275 28.7
Lsat_1_v5_gn_2_43080 Lactuca sativa HOM05D005505 ORTHO05D006974 2.1e-22 110.5 337 25.8
SHI00938 Sapria himalayana HOM05D005505 ORTHO05D006974 2.1e-22 110.5 334 26.3
arahy.Tifrunner.gnm1.ann1.QX4MR3 Arachis hypogaea HOM05D005505 ORTHO05D006974 2.7e-22 110.2 348 25.0
PGR142G3770 Punica granatum HOM05D005505 ORTHO05D006974 3.6e-22 109.8 344 25.0
Solyc09g091570.2 Solanum lycopersicum HOM05D005505 ORTHO05D006974 4.7e-22 109.4 341 26.1
Sopen09g034490 Solanum pennellii HOM05D005505 ORTHO05D006974 6.1e-22 109.0 341 26.1
BcaB06g26566 Brassica carinata HOM05D005505 ORTHO05D006974 8.0e-22 108.6 343 25.7
MBI10_g16825_MAGBIO Magnolia biondii HOM05D005505 ORTHO05D006974 1.4e-21 107.8 359 24.5
AT3G24200 Arabidopsis thaliana HOM05D005505 ORTHO05D006974 1.8e-21 107.5 344 26.5
Carub.0003s2430 Capsella rubella HOM05D005505 ORTHO05D006974 1.8e-21 107.5 353 26.9
CAN.G500.70 Capsicum annuum HOM05D005505 ORTHO05D006974 1.8e-21 107.5 340 25.3
A07p08370 Brassica napus HOM05D005505 ORTHO05D006974 2.3e-21 107.1 343 25.7
BraA07t28623Z Brassica rapa HOM05D005505 ORTHO05D006974 2.3e-21 107.1 343 25.9
Thhalv10002522m.g Eutrema salsugineum HOM05D005505 ORTHO05D006974 2.3e-21 107.1 342 25.7
Aa31LG8G10580 Aethionema arabicum HOM05D005505 ORTHO05D006974 3.0e-21 106.7 344 25.6
BcaC06g35602 Brassica carinata HOM05D005505 ORTHO05D006974 3.0e-21 106.7 343 25.7
C07p13070 Brassica napus HOM05D005505 ORTHO05D006974 3.0e-21 106.7 343 25.7
C09p75660 Brassica napus HOM05D005505 ORTHO05D006974 3.0e-21 106.7 343 25.7
BolC7t41801H Brassica oleracea HOM05D005505 ORTHO05D006974 3.0e-21 106.7 343 25.7
Sp3g21750 Schrenkiella parvula HOM05D005505 ORTHO05D006974 3.0e-21 106.7 342 25.4
CARHR099990 Cardamine hirsuta HOM05D005505 ORTHO05D006974 5.2e-21 105.9 353 26.1
DCAR_030788 Daucus carota HOM05D005505 ORTHO05D006974 5.2e-21 105.9 344 25.6
Medtr7g051960 Medicago truncatula HOM05D005505 ORTHO05D006974 6.8e-21 105.5 319 26.0
vmacro00503 Vaccinium macrocarpon HOM05D005505 ORTHO05D006974 1.2e-20 104.8 344 26.2
Lj3C565G3 Lonicera japonica HOM05D005505 ORTHO05D006974 1.5e-20 104.4 318 27.0
Cre02.g112850 Chlamydomonas reinhardtii HOM05D005505 ORTHO05D006974 9.8e-20 101.7 263 33.5
arahy.Tifrunner.gnm1.ann1.NU2AG4 Arachis hypogaea HOM05D005505 ORTHO05D006974 2.2e-19 100.5 266 27.1
Sabra01G0035800 Salix brachista HOM05D005505 ORTHO05D006974 4.8e-19 99.4 318 24.5
Nitab4.5_0000306g0020 Nicotiana tabacum HOM05D005505 ORTHO05D006974 1.4e-18 97.8 354 24.3
Nitab4.5_0004881g0030 Nicotiana tabacum HOM05D005505 ORTHO05D006974 1.8e-18 97.4 354 24.3
Hund05658 Selenicereus undatus HOM05D005505 ORTHO05D006974 4.1e-18 96.3 381 25.7
MD14G1116500 Malus domestica HOM05D005505 ORTHO05D006974 7.0e-18 95.5 254 28.0
Duzib151G0717 Durio zibethinus HOM05D005505 ORTHO05D006974 2.7e-17 93.6 327 24.8
Peaxi162Scf00047g01039 Petunia axillaris HOM05D005505 ORTHO05D006974 5.9e-17 92.4 335 23.9
PGSC0003DMG400029626 Solanum tuberosum HOM05D005505 ORTHO05D006974 1.3e-16 91.3 314 24.2
Rhsim09G0051500 Rhododendron simsii HOM05D005505 ORTHO05D006974 2.9e-16 90.1 318 25.2
Lj3A578G8 Lonicera japonica HOM05D005505 ORTHO05D006974 8.5e-16 88.6 258 28.3
Cfa022008 Carpinus fangiana HOM05D005505 ORTHO05D006974 1.5e-15 87.8 312 27.6
PRCOL_00000308 Prasinoderma coloniale HOM05D005505 ORTHO05D006974 3.2e-15 86.7 243 27.6
BcaC05g30344 Brassica carinata HOM05D005505 ORTHO05D007330 9.5e-15 85.1 271 25.8
Lj3A577G5 Lonicera japonica HOM05D005505 ORTHO05D006974 3.6e-14 83.2 236 28.4
Lj3A579T16 Lonicera japonica HOM05D005505 ORTHO05D006974 1.4e-13 81.3 287 24.4
Cpa.g.sc59.105 Carica papaya HOM05D005505 ORTHO05D006974 1.5e-12 77.8 258 24.8
CBR_g34015 Chara braunii HOM05D005505 ORTHO05D006974 2.6e-12 77.0 239 25.9
Haze_11578 Corylus avellana HOM05D005505 ORTHO05D006974 2.6e-12 77.0 261 24.5
CDE02G0375 Ceratophyllum demersum HOM05D005505 ORTHO05D006974 9.8e-12 75.1 274 24.8
Lj3A580T64 Lonicera japonica HOM05D005505 ORTHO05D006974 5.4e-10 69.3 185 29.7
SpUn0001_0240 Schrenkiella parvula HOM05D005505 ORTHO05D006974 5.4e-10 69.3 174 28.7
HPP92_019865 Vanilla planifolia HOM05D005505 ORTHO05D006974 2.3e-08 63.9 310 24.2
Lj3A565G17 Lonicera japonica HOM05D005505 ORTHO05D006974 2.8e-06 57.0 170 27.6


User provided reference genes

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