Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_29290_v3 Cicer arietinum L. HOM05D001033 ORTHO05D005438 1.3e-76 289.7 148 100.0
C02p43490 Brassica napus HOM05D001033 ORTHO05D005438 7.5e-16 87.8 113 42.5
C09p40500 Brassica napus HOM05D001033 ORTHO05D005438 7.5e-16 87.8 113 42.5
BolSC45t60863H Brassica oleracea HOM05D001033 ORTHO05D005438 7.5e-16 87.8 113 42.5
BolSC45t60948H Brassica oleracea HOM05D001033 ORTHO05D005438 7.5e-16 87.8 113 42.5
BolSC46t60995H Brassica oleracea HOM05D001033 ORTHO05D005438 7.5e-16 87.8 113 42.5
BolSC46t61040H Brassica oleracea HOM05D001033 ORTHO05D005438 7.5e-16 87.8 113 42.5
BolSC47t61102H Brassica oleracea HOM05D001033 ORTHO05D005438 7.5e-16 87.8 113 42.5
BraSC25t45843Z Brassica rapa HOM05D001033 ORTHO05D005438 7.5e-16 87.8 113 42.5
BraSC25t45872Z Brassica rapa HOM05D001033 ORTHO05D005438 7.5e-16 87.8 113 42.5
BraSC58t46415Z Brassica rapa HOM05D001033 ORTHO05D005438 7.5e-16 87.8 113 42.5
BraSC59t46597Z Brassica rapa HOM05D001033 ORTHO05D005438 7.5e-16 87.8 113 42.5
Thhalv10010825m.g Eutrema salsugineum HOM05D001033 ORTHO05D005438 1.3e-15 87.0 113 42.5
AL2G20690 Arabidopsis lyrata HOM05D001033 ORTHO05D005438 1.7e-15 86.7 113 42.5
AL2G21100 Arabidopsis lyrata HOM05D001033 ORTHO05D005438 1.7e-15 86.7 113 42.5
AL2G21480 Arabidopsis lyrata HOM05D001033 ORTHO05D005438 1.7e-15 86.7 113 42.5
ATCG00440 Arabidopsis thaliana HOM05D001033 ORTHO05D005438 1.7e-15 86.7 113 42.5
BolC7t41722H Brassica oleracea HOM05D001033 ORTHO05D005438 1.7e-15 86.7 113 43.4
CARHR282060 Cardamine hirsuta HOM05D001033 ORTHO05D005438 1.7e-15 86.7 113 42.5
CAN.G397.97 Capsicum annuum HOM05D001033 ORTHO05D005438 2.2e-15 86.3 113 42.5
Potri.013G163000 Populus trichocarpa HOM05D001033 ORTHO05D005438 2.2e-15 86.3 113 42.5
CAN.G835.10 Capsicum annuum HOM05D001033 ORTHO05D005438 3.7e-15 85.5 113 42.5
HanXRQChr11g0348981 Helianthus annuus HOM05D001033 ORTHO05D005438 3.7e-15 85.5 113 41.6
Medtr4g051245 Medicago truncatula HOM05D001033 ORTHO05D005438 3.7e-15 85.5 113 41.6
EL10As12g24023 Beta vulgaris HOM05D001033 ORTHO05D005438 4.9e-15 85.1 113 41.6
EL10As1g23050 Beta vulgaris HOM05D001033 ORTHO05D005438 4.9e-15 85.1 113 41.6
Lalb_Chr03g0039391 Lupinus albus HOM05D001033 ORTHO05D005438 4.9e-15 85.1 113 41.6
Lalb_Chr07g0192301 Lupinus albus HOM05D001033 ORTHO05D005438 4.9e-15 85.1 113 41.6
Gohir.D04G084000 Gossypium hirsutum HOM05D001033 ORTHO05D005438 6.4e-15 84.7 112 42.9
HanXRQChr00c0345g0573911 Helianthus annuus HOM05D001033 ORTHO05D005438 6.4e-15 84.7 113 41.6
HanXRQChr00c0759g0577221 Helianthus annuus HOM05D001033 ORTHO05D005438 6.4e-15 84.7 113 41.6
PGR111G0123 Punica granatum HOM05D001033 ORTHO05D005438 8.3e-15 84.3 113 41.6
Glyma.13G068600 Glycine max HOM05D001033 ORTHO05D005438 1.1e-14 84.0 113 40.7
PSO548G0108 Papaver somniferum HOM05D001033 ORTHO05D005438 1.1e-14 84.0 113 41.6
QL93p0270_0001 Quercus lobata HOM05D001033 ORTHO05D005438 1.1e-14 84.0 113 41.6
Gohir.1Z049599 Gossypium hirsutum HOM05D001033 ORTHO05D005438 1.4e-14 83.6 113 41.6
Gohir.D01G102268 Gossypium hirsutum HOM05D001033 ORTHO05D005438 1.4e-14 83.6 113 41.6
LjContig00318g0006081 Lotus japonicus HOM05D001033 ORTHO05D005438 2.4e-14 82.8 113 41.6
Nn010s41425 Nelumbo nucifera HOM05D001033 ORTHO05D005438 2.4e-14 82.8 113 40.7
SalBow1G1818 Salvia bowleyana HOM05D001033 ORTHO05D005438 2.4e-14 82.8 113 40.7
VMungo0498G0001 Vigna mungo HOM05D001033 ORTHO05D005438 2.4e-14 82.8 113 39.8
RcHm_v2.0_CPg0502161 Rosa chinensis HOM05D001033 ORTHO05D005438 4.1e-14 82.0 113 38.9
DCAR_032489 Daucus carota HOM05D001033 ORTHO05D005438 5.4e-14 81.6 113 41.6
Phvul.011G056516 Phaseolus vulgaris HOM05D001033 ORTHO05D005438 7.1e-14 81.3 113 38.9
BolC7t41667H Brassica oleracea HOM05D001033 ORTHO05D005438 9.2e-14 80.9 113 38.9
Hma1.2p1_2223F.1_g317430 Hydrangea macrophylla HOM05D001033 ORTHO05D005438 9.2e-14 80.9 113 39.8
Gohir.A09G102300 Gossypium hirsutum HOM05D001033 ORTHO05D005438 7.8e-13 77.8 113 40.7
Gohir.D07G155048 Gossypium hirsutum HOM05D001033 ORTHO05D005438 2.3e-12 76.3 81 44.4
Eucgr.A02745 Eucalyptus grandis HOM05D001033 ORTHO05D005438 3.9e-12 75.5 106 39.6
HanXRQChr02g0044941 Helianthus annuus HOM05D001033 ORTHO05D002045 3.3e-11 72.4 124 35.5
HanXRQChr07g0201001 Helianthus annuus HOM05D001033 ORTHO05D002045 3.3e-11 72.4 124 35.5
HanXRQChr08g0210311 Helianthus annuus HOM05D001033 ORTHO05D002045 3.3e-11 72.4 124 35.5
HanXRQChr10g0283501 Helianthus annuus HOM05D001033 ORTHO05D002045 3.3e-11 72.4 124 35.5
HanXRQChr10g0289221 Helianthus annuus HOM05D001033 ORTHO05D002045 3.3e-11 72.4 124 35.5
HanXRQChr11g0326771 Helianthus annuus HOM05D001033 ORTHO05D002045 3.3e-11 72.4 124 35.5
HanXRQCPg0579981 Helianthus annuus HOM05D001033 ORTHO05D002045 3.3e-11 72.4 124 35.5
Oeu028781.1 Olea europaea HOM05D001033 ORTHO05D005438 7.3e-11 71.2 108 35.2
Oeu015831.1 Olea europaea HOM05D001033 ORTHO05D005438 2.1e-10 69.7 70 47.1
Pp3c21_8460 Physcomitrium patens HOM05D001325 ORTHO05D005438 4.7e-10 68.6 110 34.5
PGSC0003DMG400015304 Solanum tuberosum HOM05D001033 ORTHO05D005438 4.7e-10 68.6 70 47.1
HanXRQChr00c0702g0576861 Helianthus annuus HOM05D001033 ORTHO05D002045 8.1e-10 67.8 98 38.8
Peaxi162Scf00334g01211 Petunia axillaris HOM05D001033 ORTHO05D002045 1.1e-09 67.4 105 38.1
Potri.007G062001 Populus trichocarpa HOM05D001325 ORTHO05D005438 6.8e-09 64.7 110 34.5
HanXRQChr02g0054851 Helianthus annuus HOM05D001033 ORTHO05D005438 1.3e-07 60.5 57 54.4
SMO086G0042 Selaginella moellendorffii HOM05D001033 ORTHO05D005438 2.9e-07 59.3 76 40.8
SMO086G0053 Selaginella moellendorffii HOM05D001033 ORTHO05D005438 2.9e-07 59.3 76 40.8
Gohir.A10G087950 Gossypium hirsutum HOM05D001033 ORTHO05D005438 8.4e-07 57.8 78 39.7
Gohir.D12G053450 Gossypium hirsutum HOM05D001033 ORTHO05D005438 8.4e-07 57.8 81 35.8
C04p22580 Brassica napus HOM05D001033 ORTHO05D005438 2.4e-06 56.2 78 38.5
BolC7t45240H Brassica oleracea HOM05D001033 ORTHO05D005438 3.2e-06 55.8 57 49.1
HanXRQChr02g0041511 Helianthus annuus HOM05D001033 ORTHO05D002045 3.2e-06 55.8 78 37.2


User provided reference genes

Program Settings