Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_29165_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 2.4e-150 535.4 264 100.0
Migut.N02401 Erythranthe guttata HOM05D006216 ORTHO05D007760 1.6e-21 107.5 161 38.5
Zm00001eb150630 Zea mays HOM05D006216 ORTHO05D007760 2.1e-21 107.1 184 37.0
ECA238G2733 Erigeron canadensis HOM05D006216 ORTHO05D007760 2.8e-21 106.7 259 34.4
vmacro04357 Vaccinium macrocarpon HOM05D006216 ORTHO05D007760 2.8e-21 106.7 160 38.1
Atru.chr3.2830 Acer truncatum HOM05D006216 ORTHO05D007760 4.8e-21 105.9 202 36.1
Cre02.g145050 Chlamydomonas reinhardtii HOM05D006216 ORTHO05D007760 8.1e-21 105.1 258 30.6
Sabra16G0133700 Salix brachista HOM05D006216 ORTHO05D007760 8.1e-21 105.1 158 41.1
Atru.BG.104.p Acer truncatum HOM05D006216 ORTHO05D007760 1.1e-20 104.8 200 36.0
CSS0004136 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 1.1e-20 104.8 162 41.4
AUR62024257 Chenopodium quinoa HOM05D006216 ORTHO05D007760 1.1e-20 104.8 201 34.8
Sp4g08430 Schrenkiella parvula HOM05D006216 ORTHO05D007760 1.1e-20 104.8 161 39.8
AT2G26930 Arabidopsis thaliana HOM05D006216 ORTHO05D007760 1.4e-20 104.4 161 39.1
MSTRG.12426 Avicennia marina HOM05D006216 ORTHO05D007760 1.8e-20 104.0 162 38.9
CSS0031944 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 1.8e-20 104.0 161 39.1
TAR633G2593 Trochodendron aralioides HOM05D006216 ORTHO05D007760 1.8e-20 104.0 162 40.1
MSTRG.21323 Avicennia marina HOM05D006216 ORTHO05D007760 2.4e-20 103.6 162 38.3
AUR62005484 Chenopodium quinoa HOM05D006216 ORTHO05D007760 2.4e-20 103.6 201 34.8
CsaV3_1G041900 Cucumis sativus L. HOM05D006216 ORTHO05D007760 2.4e-20 103.6 184 37.0
Migut.D00703 Erythranthe guttata HOM05D006216 ORTHO05D007760 2.4e-20 103.6 184 35.3
Lsat_1_v5_gn_2_36221 Lactuca sativa HOM05D006216 ORTHO05D007760 2.4e-20 103.6 157 38.9
MD03G1163100 Malus domestica HOM05D006216 ORTHO05D007760 2.4e-20 103.6 201 35.3
GSVIVG01037382001 Vitis vinifera HOM05D006216 ORTHO05D007760 2.4e-20 103.6 158 39.2
CAN.G714.2 Capsicum annuum HOM05D006216 ORTHO05D007760 3.1e-20 103.2 158 39.9
HanXRQChr14g0433421 Helianthus annuus HOM05D006216 ORTHO05D007760 4.0e-20 102.8 157 38.2
Potri.009G021800 Populus trichocarpa HOM05D006216 ORTHO05D007760 4.0e-20 102.8 202 36.1
SalBow6G4438 Salvia bowleyana HOM05D006216 ORTHO05D007760 4.0e-20 102.8 162 38.3
Sed0006982 Sechium edule HOM05D006216 ORTHO05D007760 4.0e-20 102.8 184 36.4
Actinidia07007 Actinidia chinensis HOM05D006216 ORTHO05D007760 5.3e-20 102.4 162 39.5
arahy.Tifrunner.gnm1.ann1.G3L2E7 Arachis hypogaea HOM05D006216 ORTHO05D007760 5.3e-20 102.4 162 40.1
EL10Ac6g13846 Beta vulgaris HOM05D006216 ORTHO05D007760 5.3e-20 102.4 184 34.8
Pp3c26_490 Physcomitrium patens HOM05D006216 ORTHO05D007760 5.3e-20 102.4 184 36.4
A07p17910 Brassica napus HOM05D006216 ORTHO05D007760 6.9e-20 102.1 157 39.5
BolC4t23960H Brassica oleracea HOM05D006216 ORTHO05D007760 6.9e-20 102.1 157 40.1
BraA07t29509Z Brassica rapa HOM05D006216 ORTHO05D007760 6.9e-20 102.1 157 39.5
MELO3C015605.2 Cucumis melo HOM05D006216 ORTHO05D007760 6.9e-20 102.1 200 34.5
Hma1.2p1_1843F.1_g305000 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 6.9e-20 102.1 161 38.5
Hma1.2p1_1843F.1_g305010 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 6.9e-20 102.1 161 38.5
PGSC0003DMG400022703 Solanum tuberosum HOM05D006216 ORTHO05D007760 6.9e-20 102.1 158 39.9
unitig_27.g25131 Utricularia gibba HOM05D006216 ORTHO05D007760 6.9e-20 102.1 182 36.3
AL4G20170 Arabidopsis lyrata HOM05D006216 ORTHO05D007760 9.0e-20 101.7 161 38.5
arahy.Tifrunner.gnm1.ann1.CPM77E Arachis hypogaea HOM05D006216 ORTHO05D007760 9.0e-20 101.7 161 38.5
Carub.0004s0743 Capsella rubella HOM05D006216 ORTHO05D007760 9.0e-20 101.7 161 38.5
Dinv29341 Davidia involucrata HOM05D006216 ORTHO05D007760 9.0e-20 101.7 162 40.1
SGA_v2.0_scaffold79G25547 Striga asiatica HOM05D006216 ORTHO05D007760 9.0e-20 101.7 159 38.4
Solyc01g009010.3 Solanum lycopersicum HOM05D006216 ORTHO05D007760 1.2e-19 101.3 158 39.9
ClCG03G014320 Citrullus lanatus HOM05D006216 ORTHO05D007760 1.5e-19 100.9 160 37.5
Prupe.4G269400 Prunus persica HOM05D006216 ORTHO05D007760 1.5e-19 100.9 161 38.5
BcaB02g10053 Brassica carinata HOM05D006216 ORTHO05D007760 2.0e-19 100.5 157 38.9
CARHR119100 Cardamine hirsuta HOM05D006216 ORTHO05D007760 2.0e-19 100.5 161 38.5
Cc01_g07140 Coffea canephora HOM05D006216 ORTHO05D007760 2.0e-19 100.5 158 38.6
Thhalv10002004m.g Eutrema salsugineum HOM05D006216 ORTHO05D007760 2.0e-19 100.5 157 38.9
Nitab4.5_0002300g0020 Nicotiana tabacum HOM05D006216 ORTHO05D007760 2.0e-19 100.5 158 39.9
Os01g0802100 Oryza sativa ssp. japonica HOM05D006216 ORTHO05D007760 2.0e-19 100.5 155 40.0
Peaxi162Scf00050g02022 Petunia axillaris HOM05D006216 ORTHO05D007760 2.0e-19 100.5 165 38.8
BcaC02g10847 Brassica carinata HOM05D006216 ORTHO05D007760 2.6e-19 100.1 157 38.9
C04p24560 Brassica napus HOM05D006216 ORTHO05D007760 2.6e-19 100.1 157 38.9
Ciclev10015579m.g Citrus clementina HOM05D006216 ORTHO05D007760 2.6e-19 100.1 161 36.6
Nn7g37015 Nelumbo nucifera HOM05D006216 ORTHO05D007760 2.6e-19 100.1 162 39.5
Medtr3g437340 Medicago truncatula HOM05D006216 ORTHO05D007760 3.4e-19 99.8 161 39.1
Sopen01g004500 Solanum pennellii HOM05D006216 ORTHO05D007760 3.4e-19 99.8 158 39.2
CDE09G0516 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 4.5e-19 99.4 155 40.6
Lj6g0023824 Lotus japonicus HOM05D006216 ORTHO05D007760 4.5e-19 99.4 162 38.9
Potri.001G225100 Populus trichocarpa HOM05D006216 ORTHO05D007760 4.5e-19 99.4 158 39.9
Hund25392 Selenicereus undatus HOM05D006216 ORTHO05D007760 4.5e-19 99.4 184 35.9
ATR0782G058 Amborella trichopoda HOM05D006216 ORTHO05D007760 5.8e-19 99.0 157 38.2
Mapoly0033s0031 Marchantia polymorpha HOM05D006216 ORTHO05D007760 5.8e-19 99.0 184 35.3
TPR.G11861 Trifolium pratense HOM05D006216 ORTHO05D007760 5.8e-19 99.0 162 39.5
Aa31LG5G8850 Aethionema arabicum HOM05D006216 ORTHO05D007760 7.6e-19 98.6 157 37.6
CANSAT54G1188 Cannabis sativa HOM05D006216 ORTHO05D007760 7.6e-19 98.6 161 38.5
Lalb_Chr18g0048331 Lupinus albus HOM05D006216 ORTHO05D007760 7.6e-19 98.6 162 38.9
Aqoxy1G00047 Aquilegia oxysepala HOM05D006216 ORTHO05D007760 1.0e-18 98.2 165 36.4
Ca_13675_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 1.0e-18 98.2 161 38.5
PGR119G0354 Punica granatum HOM05D006216 ORTHO05D007760 1.0e-18 98.2 161 37.9
RcHm_v2.0_Chr5g0050131 Rosa chinensis HOM05D006216 ORTHO05D007760 1.0e-18 98.2 162 39.5
TWI75G0612 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 1.0e-18 98.2 213 32.4
Gorai.001G133000 Gossypium raimondii HOM05D006216 ORTHO05D007760 1.3e-18 97.8 157 36.9
MCO08G209 Micromonas commoda HOM05D006216 ORTHO05D007760 1.3e-18 97.8 183 31.7
SMO367G1046 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.3e-18 97.8 155 38.1
Haze_23545 Corylus avellana HOM05D006216 ORTHO05D007760 1.7e-18 97.4 162 38.3
FvH4_3g27650 Fragaria vesca HOM05D006216 ORTHO05D007760 1.7e-18 97.4 161 37.9
FAN11G0826 Fragaria x ananassa HOM05D006216 ORTHO05D007760 1.7e-18 97.4 161 37.9
FAN21G1147 Fragaria x ananassa HOM05D006216 ORTHO05D007760 1.7e-18 97.4 161 37.9
Phvul.006G019500 Phaseolus vulgaris HOM05D006216 ORTHO05D007760 1.7e-18 97.4 161 37.9
Thecc.09G251000 Theobroma cacao HOM05D006216 ORTHO05D007760 1.7e-18 97.4 184 34.8
Glyma.13G072700 Glycine max HOM05D006216 ORTHO05D007760 2.2e-18 97.1 162 38.3
Glyma.20G046800 Glycine max HOM05D006216 ORTHO05D007760 2.2e-18 97.1 162 38.3
Manes.01G176400 Manihot esculenta HOM05D006216 ORTHO05D007760 2.2e-18 97.1 158 39.9
Psat5g182280 Pisum sativum HOM05D006216 ORTHO05D007760 2.2e-18 97.1 161 37.9
Gohir.A07G119000 Gossypium hirsutum HOM05D006216 ORTHO05D007760 2.9e-18 96.7 157 36.9
Gohir.D07G123300 Gossypium hirsutum HOM05D006216 ORTHO05D007760 2.9e-18 96.7 157 36.9
Lj2A825T28 Lonicera japonica HOM05D006216 ORTHO05D007760 2.9e-18 96.7 157 37.6
Sc04g0009550 Simmondsia chinensis HOM05D006216 ORTHO05D007760 2.9e-18 96.7 155 40.0
CiPaw.13G146100 Carya illinoinensis HOM05D006216 ORTHO05D007760 3.8e-18 96.3 185 36.2
PSO339G5720 Papaver somniferum HOM05D006216 ORTHO05D007760 3.8e-18 96.3 185 34.6
PSO384G3582 Papaver somniferum HOM05D006216 ORTHO05D007760 3.8e-18 96.3 185 34.6
PRCOL_00004294 Prasinoderma coloniale HOM05D006216 ORTHO05D007760 3.8e-18 96.3 188 31.9
Cfa010159 Carpinus fangiana HOM05D006216 ORTHO05D007760 4.9e-18 95.9 162 37.7
CDE08G0663 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 4.9e-18 95.9 158 40.5
FAN25G0225 Fragaria x ananassa HOM05D006216 ORTHO05D007760 4.9e-18 95.9 161 37.9
AagrBONN_evm.TU.Sc2ySwM_228.3849 Anthoceros agrestis HOM05D006216 ORTHO05D007760 6.5e-18 95.5 186 33.3
Manes.02G134400 Manihot esculenta HOM05D006216 ORTHO05D007760 6.5e-18 95.5 158 39.2
VMungo1215G0750 Vigna mungo HOM05D006216 ORTHO05D007760 6.5e-18 95.5 161 37.3
CBR_g22270 Chara braunii HOM05D006216 ORTHO05D007760 8.4e-18 95.1 154 37.0
Eucgr.J00662 Eucalyptus grandis HOM05D006216 ORTHO05D007760 8.4e-18 95.1 161 36.6
Lalb_Chr15g0080191 Lupinus albus HOM05D006216 ORTHO05D007760 8.4e-18 95.1 161 36.6
QL01p020730 Quercus lobata HOM05D006216 ORTHO05D007760 8.4e-18 95.1 161 37.9
Rhsim13G0202500 Rhododendron simsii HOM05D006216 ORTHO05D007760 1.1e-17 94.7 161 36.6
THA.LOC104816956 Tarenaya hassleriana HOM05D006216 ORTHO05D007760 1.4e-17 94.4 161 36.0
Sabra09G0013700 Salix brachista HOM05D006216 ORTHO05D007760 1.9e-17 94.0 154 39.0
TWI31G0496 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 2.5e-17 93.6 157 36.3
SEGI_15556 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 1.6e-16 90.9 154 35.1
Duzib168G1114 Durio zibethinus HOM05D006216 ORTHO05D007760 2.7e-16 90.1 162 37.7
Nitab4.5_0000428g0050 Nicotiana tabacum HOM05D006216 ORTHO05D007760 3.3e-14 83.2 185 33.0
HPP92_001661 Vanilla planifolia HOM05D006216 ORTHO05D007760 3.3e-14 83.2 176 32.4
MBI19_g37419_MAGBIO Magnolia biondii HOM05D006216 ORTHO05D007760 1.3e-10 71.2 185 30.8
DCAR_006327 Daucus carota HOM05D006216 ORTHO05D007760 3.8e-10 69.7 137 35.8
Glyma.17G179800 Glycine max HOM05D006216 ORTHO05D007760 6.5e-10 68.9 150 32.0
SMO332G0003 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 6.7e-07 58.9 102 34.3


User provided reference genes

Program Settings