Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_29126_v3 Cicer arietinum L. HOM05D005661 ORTHO05D148461 1.1e-127 459.9 229 100.0
Haze_27119 Corylus avellana HOM05D005196 ORTHO05D006107 2.6e-23 113.2 233 35.6
Lsat_1_v5_gn_9_124861 Lactuca sativa HOM05D005661 ORTHO05D007997 3.2e-21 106.3 219 32.9
MSTRG.20341 Avicennia marina HOM05D005661 ORTHO05D007997 5.4e-21 105.5 221 32.1
AL5G11770 Arabidopsis lyrata HOM05D005661 ORTHO05D007997 4.6e-20 102.4 227 30.0
AT2G02500 Arabidopsis thaliana HOM05D005661 ORTHO05D007997 6.0e-20 102.1 228 31.6
FAN08G1685 Fragaria x ananassa HOM05D005661 ORTHO05D007997 6.0e-20 102.1 220 31.4
Carub.0005s0153 Capsella rubella HOM05D005661 ORTHO05D007997 7.8e-20 101.7 227 30.0
CsaV3_3G006740 Cucumis sativus L. HOM05D005661 ORTHO05D007997 1.3e-19 100.9 218 31.7
Thhalv10004647m.g Eutrema salsugineum HOM05D005661 ORTHO05D007997 1.3e-19 100.9 227 30.0
Zm00001eb145390 Zea mays HOM05D005661 ORTHO05D007997 1.3e-19 100.9 219 32.4
MELO3C016431.2 Cucumis melo HOM05D005661 ORTHO05D007997 1.7e-19 100.5 218 31.7
FAN04G2212 Fragaria x ananassa HOM05D005661 ORTHO05D007997 1.7e-19 100.5 220 30.9
Zm00001eb365960 Zea mays HOM05D005661 ORTHO05D007997 2.3e-19 100.1 219 32.0
Cc02_g23630 Coffea canephora HOM05D005661 ORTHO05D007997 3.9e-19 99.4 219 31.1
Eucgr.I02806 Eucalyptus grandis HOM05D005661 ORTHO05D007997 3.9e-19 99.4 225 30.2
PGR142G1782 Punica granatum HOM05D005661 ORTHO05D007997 3.9e-19 99.4 220 31.8
FvH4_5g27480 Fragaria vesca HOM05D005661 ORTHO05D007997 5.1e-19 99.0 220 30.5
Potri.004G230200 Populus trichocarpa HOM05D005661 ORTHO05D007997 5.1e-19 99.0 220 30.5
GSVIVG01023131001 Vitis vinifera HOM05D005661 ORTHO05D007997 5.1e-19 99.0 218 31.2
Actinidia11729 Actinidia chinensis HOM05D005661 ORTHO05D007997 6.6e-19 98.6 224 30.8
FAN13G1518 Fragaria x ananassa HOM05D005661 ORTHO05D007997 6.6e-19 98.6 218 29.8
Prupe.1G586600 Prunus persica HOM05D005661 ORTHO05D007997 6.6e-19 98.6 220 30.5
HPP92_003715 Vanilla planifolia HOM05D005661 ORTHO05D007997 6.6e-19 98.6 220 30.5
HPP92_003721 Vanilla planifolia HOM05D005661 ORTHO05D007997 6.6e-19 98.6 220 30.5
BcaB07g30331 Brassica carinata HOM05D005661 ORTHO05D007997 8.6e-19 98.2 227 30.0
CARHR145060 Cardamine hirsuta HOM05D005661 ORTHO05D007997 8.6e-19 98.2 219 30.1
HanXRQChr05g0153021 Helianthus annuus HOM05D005661 ORTHO05D007997 8.6e-19 98.2 221 32.1
Mapoly0006s0146 Marchantia polymorpha HOM05D005661 ORTHO05D007997 8.6e-19 98.2 222 31.1
Sp2g13750 Schrenkiella parvula HOM05D005661 ORTHO05D007997 8.6e-19 98.2 227 30.4
A02p32920 Brassica napus HOM05D005661 ORTHO05D007997 1.1e-18 97.8 227 30.0
HanXRQChr09g0249911 Helianthus annuus HOM05D005661 ORTHO05D007997 1.1e-18 97.8 216 31.5
Nitab4.5_0006159g0030 Nicotiana tabacum HOM05D005661 ORTHO05D007997 1.1e-18 97.8 219 30.6
Oeu000159.1 Olea europaea HOM05D005661 ORTHO05D007997 1.5e-18 97.4 219 30.6
SMO367G1090 Selaginella moellendorffii HOM05D005661 ORTHO05D007997 1.5e-18 97.4 218 29.8
BcaC03g17145 Brassica carinata HOM05D005661 ORTHO05D007997 2.5e-18 96.7 227 29.5
MCO15G500 Micromonas commoda HOM05D005661 ORTHO05D007997 2.5e-18 96.7 218 29.4
Nitab4.5_0001085g0130 Nicotiana tabacum HOM05D005661 ORTHO05D007997 2.5e-18 96.7 219 30.6
Peaxi162Scf00194g01045 Petunia axillaris HOM05D005661 ORTHO05D007997 2.5e-18 96.7 220 31.8
RcHm_v2.0_Chr7g0218881 Rosa chinensis HOM05D005661 ORTHO05D007997 2.5e-18 96.7 220 30.9
PGSC0003DMG401018218 Solanum tuberosum HOM05D005661 ORTHO05D007997 2.5e-18 96.7 219 30.1
MSTRG.16459 Avicennia marina HOM05D005661 ORTHO05D007997 3.3e-18 96.3 219 30.1
C02p50650 Brassica napus HOM05D005661 ORTHO05D007997 3.3e-18 96.3 227 29.5
Thecc.06G064100 Theobroma cacao HOM05D005661 ORTHO05D007997 3.3e-18 96.3 219 30.6
ECA246G0516 Erigeron canadensis HOM05D005661 ORTHO05D007997 4.3e-18 95.9 219 30.6
SEGI_39309 Sequoiadendron giganteum HOM05D005661 ORTHO05D007997 4.3e-18 95.9 220 30.5
Solyc01g102820.4 Solanum lycopersicum HOM05D005661 ORTHO05D007997 4.3e-18 95.9 219 30.1
Sopen01g045220 Solanum pennellii HOM05D005661 ORTHO05D007997 4.3e-18 95.9 219 30.1
Gohir.A06G112500 Gossypium hirsutum HOM05D005661 ORTHO05D007997 5.6e-18 95.5 219 30.1
MD08G1249400 Malus domestica HOM05D005661 ORTHO05D007997 5.6e-18 95.5 220 30.5
Sc09g0007750 Simmondsia chinensis HOM05D005661 ORTHO05D007997 5.6e-18 95.5 218 30.3
Cre16.g679669 Chlamydomonas reinhardtii HOM05D005661 ORTHO05D007997 7.3e-18 95.1 226 30.1
Dinv38445 Davidia involucrata HOM05D005661 ORTHO05D007997 7.3e-18 95.1 220 30.5
unitig_21.g20570 Utricularia gibba HOM05D005661 ORTHO05D007997 7.3e-18 95.1 219 29.7
Aa31LG2G7610 Aethionema arabicum HOM05D005661 ORTHO05D007997 9.6e-18 94.7 219 30.6
Aqoxy1G02010 Aquilegia oxysepala HOM05D005661 ORTHO05D007997 9.6e-18 94.7 218 30.3
BolC2t11148H Brassica oleracea HOM05D005661 ORTHO05D007997 9.6e-18 94.7 227 29.5
BraA02t08315Z Brassica rapa HOM05D005661 ORTHO05D007997 9.6e-18 94.7 227 29.5
CAN.G1379.8 Capsicum annuum HOM05D005661 ORTHO05D007997 9.6e-18 94.7 219 30.1
TPR.G5996 Trifolium pratense HOM05D005661 ORTHO05D007997 9.6e-18 94.7 220 30.9
TWI23G0175 Tripterygium wilfordii HOM05D005661 ORTHO05D007997 1.2e-17 94.4 220 29.5
Cfa004424 Carpinus fangiana HOM05D005661 ORTHO05D007997 1.6e-17 94.0 220 29.5
QL02p103676 Quercus lobata HOM05D005661 ORTHO05D007997 1.6e-17 94.0 220 30.9
CANSAT01G0358 Cannabis sativa HOM05D005661 ORTHO05D007997 2.1e-17 93.6 218 29.8
AUR62042241 Chenopodium quinoa HOM05D005661 ORTHO05D007997 2.1e-17 93.6 234 27.8
Nn5g27134 Nelumbo nucifera HOM05D005661 ORTHO05D007997 2.1e-17 93.6 220 30.0
DCAR_031998 Daucus carota HOM05D005661 ORTHO05D007997 2.8e-17 93.2 218 28.9
Glyma.17G002400 Glycine max HOM05D005661 ORTHO05D007997 2.8e-17 93.2 218 30.3
Psat0s2555g0200 Pisum sativum HOM05D005661 ORTHO05D007997 2.8e-17 93.2 218 30.3
TAR628G0241 Trochodendron aralioides HOM05D005661 ORTHO05D007997 2.8e-17 93.2 218 29.8
AUR62032486 Chenopodium quinoa HOM05D005661 ORTHO05D007997 3.6e-17 92.8 234 28.6
Gohir.D06G117100 Gossypium hirsutum HOM05D005661 ORTHO05D007997 3.6e-17 92.8 221 30.8
MD15G1444200 Malus domestica HOM05D005661 ORTHO05D007997 3.6e-17 92.8 220 30.5
Rhsim11G0115300 Rhododendron simsii HOM05D005661 ORTHO05D007997 3.6e-17 92.8 231 29.4
Migut.B00706 Erythranthe guttata HOM05D005661 ORTHO05D007997 4.7e-17 92.4 227 29.1
Ciclev10002035m.g Citrus clementina HOM05D005661 ORTHO05D007997 6.2e-17 92.0 219 29.7
PSO210G4998 Papaver somniferum HOM05D005661 ORTHO05D007997 8.1e-17 91.7 218 29.8
THA.LOC104801778 Tarenaya hassleriana HOM05D005661 ORTHO05D007997 8.1e-17 91.7 227 29.1
EL10Ac6g13962 Beta vulgaris HOM05D005661 ORTHO05D007997 1.1e-16 91.3 216 28.7
CSS0021874 Camellia sinensis var. sinensis HOM05D005661 ORTHO05D007997 1.1e-16 91.3 220 30.0
Gorai.010G134700 Gossypium raimondii HOM05D005661 ORTHO05D007997 1.1e-16 91.3 219 29.7
Manes.14G146200 Manihot esculenta HOM05D005661 ORTHO05D007997 1.1e-16 91.3 220 29.5
VMungo1215G1111 Vigna mungo HOM05D005661 ORTHO05D007997 1.1e-16 91.3 234 29.9
Haze_09964 Corylus avellana HOM05D005661 ORTHO05D007997 1.4e-16 90.9 219 31.1
Pp3c15_1010 Physcomitrium patens HOM05D005661 ORTHO05D007997 1.4e-16 90.9 218 30.3
ATR1089G013 Amborella trichopoda HOM05D005661 ORTHO05D007997 3.1e-16 89.7 226 29.2
MBI06_g17067_MAGBIO Magnolia biondii HOM05D005661 ORTHO05D007997 5.2e-16 89.0 220 29.5
Pp3c9_590 Physcomitrium patens HOM05D005661 ORTHO05D007997 5.2e-16 89.0 219 30.1
DCAR_001732 Daucus carota HOM05D005661 ORTHO05D007997 6.8e-16 88.6 218 28.9
Ah.02g128470 Amaranthus hybridus HOM05D005661 ORTHO05D007997 1.2e-15 87.8 244 28.7
Phvul.003G090900 Phaseolus vulgaris HOM05D005661 ORTHO05D007997 1.2e-15 87.8 217 30.0
Manes.14G166900 Manihot esculenta HOM05D005661 ORTHO05D007997 3.4e-15 86.3 220 28.6
Dinv29650 Davidia involucrata HOM05D005661 ORTHO05D007997 5.8e-15 85.5 202 29.2
Lj4g0018255 Lotus japonicus HOM05D005661 ORTHO05D007997 5.8e-15 85.5 217 29.0
Medtr4g134540 Medicago truncatula HOM05D005661 ORTHO05D007997 5.8e-15 85.5 212 30.2
Os01g0887100 Oryza sativa ssp. japonica HOM05D005661 ORTHO05D007997 7.6e-15 85.1 143 35.7
COL.COLO4_31208 Corchorus olitorius HOM05D005661 ORTHO05D007997 1.7e-14 84.0 201 28.9
arahy.Tifrunner.gnm1.ann1.PPAS6H Arachis hypogaea HOM05D005661 ORTHO05D007997 2.4e-13 80.1 221 27.6
vmacro01624 Vaccinium macrocarpon HOM05D005661 ORTHO05D007997 3.5e-12 76.3 220 29.1
arahy.Tifrunner.gnm1.ann1.FQN863 Arachis hypogaea HOM05D005661 ORTHO05D007997 2.3e-11 73.6 217 27.6
Sabra01G0175500 Salix brachista HOM05D005661 ORTHO05D007997 8.7e-11 71.6 266 24.4
CBR_g214 Chara braunii HOM05D005661 ORTHO05D007997 1.1e-10 71.2 171 30.4
Sed0000786 Sechium edule HOM05D005661 ORTHO05D007997 1.1e-10 71.2 169 31.4
CDE02G0980 Ceratophyllum demersum HOM05D005661 ORTHO05D007997 1.9e-10 70.5 217 25.3
CiPaw.06G177000 Carya illinoinensis HOM05D005661 ORTHO05D007997 5.6e-10 68.9 179 29.1
ClCG10G007530 Citrullus lanatus HOM05D005661 ORTHO05D007997 1.3e-09 67.8 310 24.2
CDE04G2298 Ceratophyllum demersum HOM05D005661 ORTHO05D007997 2.8e-09 66.6 217 25.8
Cpa.g.sc173.2 Carica papaya HOM05D005661 ORTHO05D007997 8.1e-09 65.1 170 28.2
SGA_v2.0_scaffold131G34439 Striga asiatica HOM05D005661 ORTHO05D007997 1.4e-08 64.3 217 25.3
Lj5A292T55 Lonicera japonica HOM05D005661 ORTHO05D007997 1.5e-07 60.8 200 24.5
Lj5A292T53 Lonicera japonica HOM05D005661 ORTHO05D007997 3.8e-06 56.2 159 27.7


User provided reference genes

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