Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_29028_v3 Cicer arietinum L. HOM05D020748 ORTHO05D028602 0.0e+00 1125.9 562 100.0
Cfa023489 Carpinus fangiana HOM05D020748 ORTHO05D028602 2.2e-47 194.5 301 37.9
PRCOL_00006367 Prasinoderma coloniale HOM05D020748 ORTHO05D028602 2.0e-40 171.4 456 28.5
MCO06G150 Micromonas commoda HOM05D020748 ORTHO05D028602 5.4e-38 163.3 360 32.2
ATR0177G062 Amborella trichopoda HOM05D004231 ORTHO05D004814 9.5e-11 72.8 134 33.6
Cre02.g082250 Chlamydomonas reinhardtii HOM05D004231 ORTHO05D004814 2.3e-09 68.2 140 34.3
Lsat_1_v5_gn_4_71321 Lactuca sativa HOM05D004231 ORTHO05D004814 5.2e-09 67.0 135 29.6
PSO063G5124 Papaver somniferum HOM05D004231 ORTHO05D004814 5.2e-09 67.0 121 33.1
CSS0030147 Camellia sinensis var. sinensis HOM05D004231 ORTHO05D004814 6.8e-09 66.6 124 33.1
PSO782G1111 Papaver somniferum HOM05D004231 ORTHO05D004814 1.2e-08 65.9 121 32.2
HPP92_007738 Vanilla planifolia HOM05D004231 ORTHO05D004814 2.0e-08 65.1 122 29.5
Cre02.g082200 Chlamydomonas reinhardtii HOM05D004231 ORTHO05D004814 2.6e-08 64.7 140 33.6
Psat2g000680 Pisum sativum HOM05D004231 ORTHO05D004814 2.6e-08 64.7 120 33.3
CAN.G5871.1 Capsicum annuum HOM05D004231 ORTHO05D004814 3.4e-08 64.3 135 29.6
Oeu005953.1 Olea europaea HOM05D004231 ORTHO05D004814 3.4e-08 64.3 138 30.4
Peaxi162Scf00362g00110 Petunia axillaris HOM05D004231 ORTHO05D004814 3.4e-08 64.3 135 32.6
Solyc04g008760.3 Solanum lycopersicum HOM05D004231 ORTHO05D004814 3.4e-08 64.3 135 28.9
Sopen04g003940 Solanum pennellii HOM05D004231 ORTHO05D004814 3.4e-08 64.3 135 28.9
PGSC0003DMG400014663 Solanum tuberosum HOM05D000109 ORTHO05D004814 3.4e-08 64.3 136 30.1
PGSC0003DMG400025309 Solanum tuberosum HOM05D004231 ORTHO05D004814 3.4e-08 64.3 135 28.9
FvH4_2g16830 Fragaria vesca HOM05D004231 ORTHO05D004814 9.9e-08 62.8 136 29.4
FAN15G0610 Fragaria x ananassa HOM05D004231 ORTHO05D004814 9.9e-08 62.8 136 29.4
FAN24G0296 Fragaria x ananassa HOM05D004231 ORTHO05D004814 9.9e-08 62.8 136 29.4
Prupe.8G180500 Prunus persica HOM05D004231 ORTHO05D004814 1.3e-07 62.4 135 30.4
RcHm_v2.0_Chr6g0280961 Rosa chinensis HOM05D004231 ORTHO05D004814 1.3e-07 62.4 136 29.4
Sopen01g054320 Solanum pennellii HOM05D004231 ORTHO05D004814 1.3e-07 62.4 136 29.4
Os02g0831800 Oryza sativa ssp. japonica HOM05D004231 ORTHO05D004814 1.7e-07 62.0 108 34.3
FAN27G2171 Fragaria x ananassa HOM05D004231 ORTHO05D004814 2.2e-07 61.6 136 28.7
Ah.01g009950 Amaranthus hybridus HOM05D004231 ORTHO05D004814 3.8e-07 60.8 124 30.6
Gohir.D02G193900 Gossypium hirsutum HOM05D004231 ORTHO05D004814 3.8e-07 60.8 128 29.7
Gorai.005G216700 Gossypium raimondii HOM05D004231 ORTHO05D004814 3.8e-07 60.8 128 29.7
Gohir.A03G170800 Gossypium hirsutum HOM05D004231 ORTHO05D004814 6.4e-07 60.1 128 28.9
DCAR_006270 Daucus carota HOM05D004231 ORTHO05D004814 8.4e-07 59.7 132 26.5
Lalb_Chr12g0208621 Lupinus albus HOM05D004231 ORTHO05D004814 8.4e-07 59.7 136 28.7
Glyma.14G001000 Glycine max HOM05D004231 ORTHO05D004814 1.9e-06 58.5 127 29.9
unitig_0.g2083 Utricularia gibba HOM05D004231 ORTHO05D004814 1.9e-06 58.5 129 27.1
Lalb_Chr07g0189301 Lupinus albus HOM05D004231 ORTHO05D004814 2.4e-06 58.2 131 29.8
Psat2g000800 Pisum sativum HOM05D004231 ORTHO05D004814 4.1e-06 57.4 101 34.7
Aqoxy1G01703 Aquilegia oxysepala HOM05D004231 ORTHO05D004814 7.1e-06 56.6 132 27.3
RhsimUnG0022900 Rhododendron simsii HOM05D004231 ORTHO05D004814 7.1e-06 56.6 125 28.8


User provided reference genes

Program Settings