Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_28981_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 9.1e-128 460.3 240 100.0
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 5.6e-37 158.7 239 38.1
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 5.7e-29 132.1 237 37.1
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 1.1e-27 127.9 246 34.6
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 4.1e-27 125.9 243 32.5
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 2.0e-26 123.6 245 32.7
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 2.6e-26 123.2 245 33.5
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 7.6e-26 121.7 244 32.0
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 7.6e-26 121.7 244 31.6
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 1.3e-25 120.9 244 32.0
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 2.2e-25 120.2 243 32.1
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 2.9e-25 119.8 248 32.7
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 3.8e-25 119.4 243 32.1
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 3.8e-25 119.4 244 32.0
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 5.0e-25 119.0 247 34.4
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 5.0e-25 119.0 244 31.1
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 5.0e-25 119.0 248 32.3
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 8.5e-25 118.2 244 29.9
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 2.5e-24 116.7 244 30.3
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 2.5e-24 116.7 244 30.3
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 2.5e-24 116.7 244 31.1
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 3.2e-24 116.3 244 30.3
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 3.2e-24 116.3 244 31.6
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 4.2e-24 115.9 244 30.3
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 5.5e-24 115.5 244 30.3
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 5.5e-24 115.5 244 30.3
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 5.5e-24 115.5 244 29.9
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 5.5e-24 115.5 241 29.0
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 5.5e-24 115.5 244 30.3
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 9.3e-24 114.8 244 30.3
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 9.3e-24 114.8 244 30.7
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 9.3e-24 114.8 243 30.5
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 9.3e-24 114.8 244 30.3
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 9.3e-24 114.8 243 31.3
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 1.2e-23 114.4 244 29.9
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 1.2e-23 114.4 244 29.9
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 1.2e-23 114.4 244 29.9
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 1.2e-23 114.4 244 31.1
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 1.6e-23 114.0 244 31.1
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 1.6e-23 114.0 244 29.9
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 2.1e-23 113.6 244 33.6
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 2.7e-23 113.2 244 31.1
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 2.7e-23 113.2 244 31.1
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 2.7e-23 113.2 241 30.3
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 3.6e-23 112.8 244 29.9
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 3.6e-23 112.8 244 29.9
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 4.6e-23 112.5 245 30.2
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 4.6e-23 112.5 245 30.2
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 6.1e-23 112.1 244 30.3
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 6.1e-23 112.1 244 30.3
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 7.9e-23 111.7 237 32.1
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 7.9e-23 111.7 244 29.9
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 1.3e-22 110.9 244 30.7
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 1.3e-22 110.9 244 29.1
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 1.8e-22 110.5 243 28.8
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 1.8e-22 110.5 244 27.9
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 1.8e-22 110.5 244 30.3
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 2.3e-22 110.2 245 29.8
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 2.3e-22 110.2 245 30.2
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 2.3e-22 110.2 244 29.9
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 2.3e-22 110.2 244 28.3
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 3.0e-22 109.8 244 29.9
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 3.9e-22 109.4 244 29.1
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 3.9e-22 109.4 244 29.9
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 3.9e-22 109.4 244 29.5
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 5.1e-22 109.0 245 29.4
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 6.7e-22 108.6 244 29.1
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 6.7e-22 108.6 244 28.3
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 8.7e-22 108.2 244 29.9
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 1.1e-21 107.8 244 29.1
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 1.5e-21 107.5 244 27.9
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 1.9e-21 107.1 163 38.0
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 2.5e-21 106.7 245 28.2
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 3.3e-21 106.3 258 29.1
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 4.3e-21 105.9 244 30.7
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 4.3e-21 105.9 230 30.9
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 7.4e-21 105.1 244 27.9
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 9.7e-21 104.8 244 28.7
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 9.7e-21 104.8 244 29.1
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 1.7e-20 104.0 244 29.5
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 2.2e-20 103.6 231 29.9
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 3.7e-20 102.8 171 34.5
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 4.8e-20 102.4 244 28.7
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 6.3e-20 102.1 217 32.7
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 6.3e-20 102.1 250 27.2
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 8.2e-20 101.7 244 30.7
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 8.2e-20 101.7 244 27.9
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.4e-19 100.9 247 30.0
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 1.8e-19 100.5 163 33.7
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 2.4e-19 100.1 233 28.3
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 4.1e-19 99.4 166 33.7
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 5.3e-19 99.0 242 29.3
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 6.9e-19 98.6 243 27.2
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 9.1e-19 98.2 173 34.1
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 9.1e-19 98.2 235 29.4
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 1.5e-18 97.4 244 28.7
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 1.5e-18 97.4 268 29.1
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 2.0e-18 97.1 269 26.8
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 4.5e-18 95.9 171 31.6
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 7.7e-18 95.1 277 25.6
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 7.7e-18 95.1 219 30.1
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 1.0e-17 94.7 184 32.6
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 1.3e-17 94.4 213 32.9
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 1.7e-17 94.0 253 26.5
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 2.9e-17 93.2 245 26.9
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 3.7e-12 76.3 150 34.7
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.4e-11 74.3 91 39.6
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 3.4e-10 69.7 197 29.9


User provided reference genes

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