Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_28940_v3 Cicer arietinum L. HOM05D001568 ORTHO05D148655 6.7e-279 963.4 484 100.0
Mapoly0081s0053 Marchantia polymorpha HOM05D001568 ORTHO05D008804 2.2e-16 91.3 222 28.8
Pp3c3_17050 Physcomitrium patens HOM05D001568 ORTHO05D008804 6.5e-16 89.7 243 28.0
Os03g0729700 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D008804 1.9e-15 88.2 260 26.5
SMO358G0428 Selaginella moellendorffii HOM05D001568 ORTHO05D008804 7.9e-14 82.8 245 25.3
AagrBONN_evm.TU.Sc2ySwM_362.475 Anthoceros agrestis HOM05D001568 ORTHO05D008804 1.0e-13 82.4 229 28.4
Nn5g30645 Nelumbo nucifera HOM05D001568 ORTHO05D008804 1.0e-13 82.4 241 28.6
ATR0739G203 Amborella trichopoda HOM05D001568 ORTHO05D008804 2.0e-12 78.2 264 24.6
CBR_g48696 Chara braunii HOM05D001568 ORTHO05D008804 2.0e-12 78.2 235 28.5
Aqoxy1G00265 Aquilegia oxysepala HOM05D001568 ORTHO05D008804 2.6e-12 77.8 226 24.8
EL10Ac9g22185 Beta vulgaris HOM05D001568 ORTHO05D008804 3.3e-12 77.4 253 25.7
BcaB07g33452 Brassica carinata HOM05D001568 ORTHO05D008804 3.3e-12 77.4 241 26.1
HPP92_026588 Vanilla planifolia HOM05D001568 ORTHO05D008804 3.3e-12 77.4 239 26.8
arahy.Tifrunner.gnm1.ann1.ESII2D Arachis hypogaea HOM05D001568 ORTHO05D008804 5.7e-12 76.6 226 26.1
BcaC08g43178 Brassica carinata HOM05D001568 ORTHO05D008804 7.4e-12 76.3 242 26.0
COL.COLO4_32489 Corchorus olitorius HOM05D001568 ORTHO05D008804 7.4e-12 76.3 239 25.9
Glyma.20G135600 Glycine max HOM05D001568 ORTHO05D008804 9.7e-12 75.9 270 23.7
TPR.G21139 Trifolium pratense HOM05D001568 ORTHO05D008804 9.7e-12 75.9 239 24.7
MBI16_g16470_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D008804 1.3e-11 75.5 229 24.9
arahy.Tifrunner.gnm1.ann1.804FU2 Arachis hypogaea HOM05D001568 ORTHO05D008804 1.7e-11 75.1 226 25.7
Cc00_g17990 Coffea canephora HOM05D001568 ORTHO05D008804 1.7e-11 75.1 252 25.4
MELO3C018530.2 Cucumis melo HOM05D001568 ORTHO05D008804 1.7e-11 75.1 239 24.7
SGA_v2.0_scaffold225G43060 Striga asiatica HOM05D001568 ORTHO05D008804 2.2e-11 74.7 226 25.7
Lalb_Chr06g0165001 Lupinus albus HOM05D001568 ORTHO05D008804 2.8e-11 74.3 239 24.3
Sp1g36840 Schrenkiella parvula HOM05D001568 ORTHO05D008804 4.8e-11 73.6 251 25.5
SpUn0137_0040 Schrenkiella parvula HOM05D001568 ORTHO05D008804 4.8e-11 73.6 251 25.5
ECA240G3857 Erigeron canadensis HOM05D001568 ORTHO05D008804 6.3e-11 73.2 236 24.6
Nitab4.5_0001099g0070 Nicotiana tabacum HOM05D001568 ORTHO05D008804 6.3e-11 73.2 253 24.1
VMungo0720G2114 Vigna mungo HOM05D001568 ORTHO05D008804 6.3e-11 73.2 237 23.6
Gohir.A12G018701 Gossypium hirsutum HOM05D001568 ORTHO05D008804 8.2e-11 72.8 242 24.4
Gorai.008G019500 Gossypium raimondii HOM05D001568 ORTHO05D008804 1.1e-10 72.4 239 23.0
GSVIVG01037056001 Vitis vinifera HOM05D001568 ORTHO05D008804 1.1e-10 72.4 239 24.3
BolC6t35607H Brassica oleracea HOM05D001568 ORTHO05D008804 1.4e-10 72.0 243 25.9
HanXRQChr03g0072921 Helianthus annuus HOM05D001568 ORTHO05D008804 1.4e-10 72.0 230 23.9
Manes.07G057400 Manihot esculenta HOM05D001568 ORTHO05D008804 2.4e-10 71.2 254 23.6
Lsat_1_v5_gn_9_113380 Lactuca sativa HOM05D001568 ORTHO05D008804 4.1e-10 70.5 229 27.5
CANSAT25G3386 Cannabis sativa HOM05D001568 ORTHO05D008804 5.3e-10 70.1 265 22.6
Hma1.2p1_0661F.1_g198113 Hydrangea macrophylla HOM05D001568 ORTHO05D008804 7.0e-10 69.7 261 24.1
FAN15G2988 Fragaria x ananassa HOM05D001568 ORTHO05D008804 9.1e-10 69.3 279 22.9
Lj9A337T44 Lonicera japonica HOM05D001568 ORTHO05D008804 1.2e-09 68.9 238 23.9
AUR62027019 Chenopodium quinoa HOM05D001568 ORTHO05D008804 1.5e-09 68.6 213 25.4
Eucgr.I02493 Eucalyptus grandis HOM05D001568 ORTHO05D008804 2.6e-09 67.8 243 23.9
CiPaw.05G020500 Carya illinoinensis HOM05D001568 ORTHO05D008804 3.5e-09 67.4 244 22.5
Ciclev10030269m.g Citrus clementina HOM05D001568 ORTHO05D008804 4.5e-09 67.0 255 22.4
FvH4_2g03440 Fragaria vesca HOM05D001568 ORTHO05D008804 4.5e-09 67.0 239 23.0
Atru.chr5.2305 Acer truncatum HOM05D001568 ORTHO05D008804 5.9e-09 66.6 239 21.8
Rhsim05G0092700 Rhododendron simsii HOM05D001568 ORTHO05D008804 5.9e-09 66.6 270 22.2
CAN.G606.69 Capsicum annuum HOM05D001568 ORTHO05D008804 7.7e-09 66.2 219 25.6
MD10G1109100 Malus domestica HOM05D001568 ORTHO05D008804 1.3e-08 65.5 226 23.5
RcHm_v2.0_Chr6g0248601 Rosa chinensis HOM05D001568 ORTHO05D008804 1.7e-08 65.1 226 23.5
Potri.001G290100 Populus trichocarpa HOM05D001568 ORTHO05D008804 6.5e-08 63.2 239 20.9
Cfa004706 Carpinus fangiana HOM05D001568 ORTHO05D008804 8.5e-08 62.8 226 23.5
Phvul.007G046900 Phaseolus vulgaris HOM05D001568 ORTHO05D008804 1.1e-07 62.4 202 23.8
Dinv09541 Davidia involucrata HOM05D001568 ORTHO05D008804 9.4e-07 59.3 219 22.8
Ah.01g007040 Amaranthus hybridus HOM05D001568 ORTHO05D008804 1.6e-06 58.5 191 26.7
Sed0001597 Sechium edule HOM05D001568 ORTHO05D008804 1.6e-06 58.5 154 25.3
Peaxi162Scf00016g03020 Petunia axillaris HOM05D001568 ORTHO05D008804 2.7e-06 57.8 202 23.8
Cre03.g175800 Chlamydomonas reinhardtii HOM05D001568 ORTHO05D008804 8.0e-06 56.2 103 31.1


User provided reference genes

Program Settings