Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_28699_v3 Cicer arietinum L. HOM05D000549 ORTHO05D148168 7.6e-115 417.2 207 100.0
EL10Ac5g12312 Beta vulgaris HOM05D000549 ORTHO05D006202 8.7e-10 68.2 120 37.5
COL.COLO4_10023 Corchorus olitorius HOM05D000549 ORTHO05D006202 2.5e-09 66.6 115 35.7
CANSAT21G0274 Cannabis sativa HOM05D000549 ORTHO05D006202 7.3e-09 65.1 126 34.9
Ah.12g054460 Amaranthus hybridus HOM05D000549 ORTHO05D006202 9.6e-09 64.7 121 34.7
PRCOL_00000103 Prasinoderma coloniale HOM05D000549 ORTHO05D006202 9.6e-09 64.7 171 31.6
arahy.Tifrunner.gnm1.ann1.5JEW3L Arachis hypogaea HOM05D000549 ORTHO05D006202 1.6e-08 63.9 118 36.4
Zm00001eb249240 Zea mays HOM05D000549 ORTHO05D006202 1.6e-08 63.9 136 35.3
arahy.Tifrunner.gnm1.ann1.U9FTP0 Arachis hypogaea HOM05D000549 ORTHO05D006202 2.1e-08 63.5 136 34.6
Lj4g0005647 Lotus japonicus HOM05D000549 ORTHO05D006202 2.1e-08 63.5 118 36.4
VMungo0251G2614 Vigna mungo HOM05D003706 ORTHO05D006202 2.1e-08 63.5 121 35.5
GSVIVG01004793001 Vitis vinifera HOM05D000549 ORTHO05D006202 2.1e-08 63.5 164 28.7
Phvul.003G223810 Phaseolus vulgaris HOM05D000549 ORTHO05D006202 3.6e-08 62.8 121 35.5
TPR.G10468 Trifolium pratense HOM05D000549 ORTHO05D006202 3.6e-08 62.8 155 31.6
Atru.chr9.1244 Acer truncatum HOM05D000549 ORTHO05D006202 4.7e-08 62.4 118 36.4
Actinidia31505 Actinidia chinensis HOM05D007047 ORTHO05D006202 4.7e-08 62.4 131 34.4
AL7G37850 Arabidopsis lyrata HOM05D000549 ORTHO05D006202 4.7e-08 62.4 159 29.6
Glyma.17G145600 Glycine max HOM05D000549 ORTHO05D006202 4.7e-08 62.4 118 36.4
Duzib205G0373 Durio zibethinus HOM05D000549 ORTHO05D006202 6.2e-08 62.0 118 33.9
Glyma.05G063900 Glycine max HOM05D000549 ORTHO05D006202 6.2e-08 62.0 118 35.6
HanXRQChr03g0089881 Helianthus annuus HOM05D000549 ORTHO05D006202 6.2e-08 62.0 164 29.9
Aa31LG2G12980 Aethionema arabicum HOM05D000549 ORTHO05D006202 8.1e-08 61.6 160 28.1
DCAR_004604 Daucus carota HOM05D000549 ORTHO05D006202 8.1e-08 61.6 158 29.1
FvH4_5g19890 Fragaria vesca HOM05D000549 ORTHO05D006202 8.1e-08 61.6 154 29.2
Gorai.008G232200 Gossypium raimondii HOM05D000549 ORTHO05D006202 8.1e-08 61.6 154 27.9
Sed0002501 Sechium edule HOM05D000549 ORTHO05D006202 8.1e-08 61.6 118 33.1
CAN.G1989.3 Capsicum annuum HOM05D000549 ORTHO05D001527 1.1e-07 61.2 117 34.2
Dinv39189 Davidia involucrata HOM05D000549 ORTHO05D006202 1.1e-07 61.2 162 28.4
ECA240G4209 Erigeron canadensis HOM05D000549 ORTHO05D006202 1.1e-07 61.2 164 29.3
FAN08G1945 Fragaria x ananassa HOM05D000549 ORTHO05D006202 1.1e-07 61.2 154 29.2
Lalb_Chr00c24g0407461 Lupinus albus HOM05D000549 ORTHO05D006202 1.1e-07 61.2 189 29.1
BcaB04g18396 Brassica carinata HOM05D007047 ORTHO05D006202 1.4e-07 60.8 159 29.6
CSS0022595 Camellia sinensis var. sinensis HOM05D000549 ORTHO05D006202 1.4e-07 60.8 115 34.8
Carub.0007s2456 Capsella rubella HOM05D000549 ORTHO05D006202 1.4e-07 60.8 159 28.9
Sc01g0008180 Simmondsia chinensis HOM05D000549 ORTHO05D006202 1.4e-07 60.8 118 34.7
Gohir.A12G214000 Gossypium hirsutum HOM05D000549 ORTHO05D006202 1.8e-07 60.5 118 33.1
Gohir.D12G216600 Gossypium hirsutum HOM05D000549 ORTHO05D006202 1.8e-07 60.5 118 33.1
Os02g0654000 Oryza sativa ssp. japonica HOM05D000549 ORTHO05D006202 1.8e-07 60.5 123 33.3
Thecc.03G244600 Theobroma cacao HOM05D000549 ORTHO05D006202 1.8e-07 60.5 115 33.9
A08p12720 Brassica napus HOM05D007047 ORTHO05D006202 2.4e-07 60.1 159 29.6
Migut.C00200 Erythranthe guttata HOM05D000549 ORTHO05D006202 2.4e-07 60.1 118 37.3
Eucgr.D02114 Eucalyptus grandis HOM05D000549 ORTHO05D006202 2.4e-07 60.1 154 28.6
Hma1.2p1_0821F.1_g224190 Hydrangea macrophylla HOM05D000549 ORTHO05D006202 2.4e-07 60.1 118 34.7
Medtr4g100350 Medicago truncatula HOM05D000549 ORTHO05D006202 2.4e-07 60.1 118 36.4
PSO782G4788 Papaver somniferum HOM05D000549 ORTHO05D006202 2.4e-07 60.1 126 34.9
SGA_v2.0_scaffold48G18016 Striga asiatica HOM05D000549 ORTHO05D006202 2.4e-07 60.1 118 34.7
Aqoxy3G02723 Aquilegia oxysepala HOM05D000549 ORTHO05D006202 3.1e-07 59.7 118 36.4
MSTRG.950 Avicennia marina HOM05D000549 ORTHO05D006202 3.1e-07 59.7 156 28.2
Os02g0654100 Oryza sativa ssp. japonica HOM05D000549 ORTHO05D006202 3.1e-07 59.7 123 33.3
PSO063G6040 Papaver somniferum HOM05D000549 ORTHO05D006202 3.1e-07 59.7 126 34.1
Potri.001G153300 Populus trichocarpa HOM05D000549 ORTHO05D006202 3.1e-07 59.7 154 29.9
ATR0057G066 Amborella trichopoda HOM05D000549 ORTHO05D006202 4.0e-07 59.3 132 33.3
AT4G16800 Arabidopsis thaliana HOM05D000549 ORTHO05D006202 4.0e-07 59.3 123 34.1
CSS0011014 Camellia sinensis var. sinensis HOM05D000549 ORTHO05D006202 4.0e-07 59.3 115 33.9
Lalb_Chr05g0221011 Lupinus albus HOM05D000549 ORTHO05D006202 4.0e-07 59.3 121 33.9
PGR031G1501 Punica granatum HOM05D000549 ORTHO05D006202 4.0e-07 59.3 143 31.5
Duzib068G1439 Durio zibethinus HOM05D000549 ORTHO05D006202 5.3e-07 58.9 131 32.8
Prupe.5G061300 Prunus persica HOM05D000549 ORTHO05D006202 5.3e-07 58.9 154 28.6
RcHm_v2.0_Chr7g0204691 Rosa chinensis HOM05D000549 ORTHO05D006202 5.3e-07 58.9 157 29.3
Ca_21986_v3 Cicer arietinum L. HOM05D000549 ORTHO05D006202 6.9e-07 58.5 118 34.7
Ca_21999_v3 Cicer arietinum L. HOM05D000549 ORTHO05D006202 6.9e-07 58.5 118 34.7
ClCG10G002420 Citrullus lanatus HOM05D000549 ORTHO05D006202 6.9e-07 58.5 126 32.5
Manes.01G085900 Manihot esculenta HOM05D000549 ORTHO05D006202 6.9e-07 58.5 118 33.9
Mapoly0034s0004 Marchantia polymorpha HOM05D000549 ORTHO05D006202 6.9e-07 58.5 162 28.4
Psat4g074240 Pisum sativum HOM05D000549 ORTHO05D006202 6.9e-07 58.5 118 35.6
THA.LOC104802693 Tarenaya hassleriana HOM05D000549 ORTHO05D001527 6.9e-07 58.5 119 32.8
THA.LOC104818910 Tarenaya hassleriana HOM05D000549 ORTHO05D001527 6.9e-07 58.5 119 32.8
TAR375G0271 Trochodendron aralioides HOM05D000549 ORTHO05D006202 6.9e-07 58.5 126 34.1
AUR62007136 Chenopodium quinoa HOM05D000549 ORTHO05D006202 9.0e-07 58.2 122 33.6
Peaxi162Scf00399g00519 Petunia axillaris HOM05D000549 ORTHO05D001527 9.0e-07 58.2 62 43.5
Potri.003G080800 Populus trichocarpa HOM05D000549 ORTHO05D006202 9.0e-07 58.2 118 34.7
TWI23G0592 Tripterygium wilfordii HOM05D000549 ORTHO05D006202 9.0e-07 58.2 118 33.1
Lsat_1_v5_gn_6_93941 Lactuca sativa HOM05D000549 ORTHO05D006202 1.5e-06 57.4 118 33.9
Zm00001eb249250 Zea mays HOM05D000549 ORTHO05D006202 1.5e-06 57.4 123 32.5
CiPaw.12G048500 Carya illinoinensis HOM05D000549 ORTHO05D006202 2.0e-06 57.0 118 33.1
Thhalv10020152m.g Eutrema salsugineum HOM05D000549 ORTHO05D001527 2.0e-06 57.0 119 31.1
MD04G1057400 Malus domestica HOM05D000549 ORTHO05D006202 2.0e-06 57.0 154 27.9
Rhsim13G0009200 Rhododendron simsii HOM05D000549 ORTHO05D001527 2.0e-06 57.0 62 45.2
A03p58590 Brassica napus HOM05D000549 ORTHO05D001527 2.6e-06 56.6 77 40.3
A03p58640 Brassica napus HOM05D000549 ORTHO05D001527 2.6e-06 56.6 77 40.3
Ciclev10019636m.g Citrus clementina HOM05D000549 ORTHO05D006202 2.6e-06 56.6 126 31.7
Nn6g33826 Nelumbo nucifera HOM05D000549 ORTHO05D006202 2.6e-06 56.6 115 34.8
THA.LOC104807916 Tarenaya hassleriana HOM05D000549 ORTHO05D006202 2.6e-06 56.6 123 33.3
Sp7g17310 Schrenkiella parvula HOM05D000549 ORTHO05D006202 3.4e-06 56.2 159 27.0
Solyc08g078130.4 Solanum lycopersicum HOM05D000549 ORTHO05D006202 3.4e-06 56.2 126 31.0
BcaNung02891 Brassica carinata HOM05D000549 ORTHO05D001527 4.4e-06 55.8 77 40.3
C07p56580 Brassica napus HOM05D000549 ORTHO05D001527 4.4e-06 55.8 77 40.3
Pp3s34_300 Physcomitrium patens HOM05D000549 ORTHO05D006202 4.4e-06 55.8 73 42.5
PRCOL_00000613 Prasinoderma coloniale HOM05D000549 ORTHO05D001527 4.4e-06 55.8 74 43.2
Sp3g05820 Schrenkiella parvula HOM05D000549 ORTHO05D001527 4.4e-06 55.8 119 31.1
CDE06G0094 Ceratophyllum demersum HOM05D000549 ORTHO05D006202 5.8e-06 55.5 124 33.1
CDE06G1267 Ceratophyllum demersum HOM05D000549 ORTHO05D006202 5.8e-06 55.5 124 33.1
AUR62018877 Chenopodium quinoa HOM05D000549 ORTHO05D006202 5.8e-06 55.5 122 33.6
Oeu017039.1 Olea europaea HOM05D000549 ORTHO05D006202 5.8e-06 55.5 118 32.2
Sopen08g026620 Solanum pennellii HOM05D000549 ORTHO05D006202 5.8e-06 55.5 126 31.0
PGSC0003DMG400026228 Solanum tuberosum HOM05D000549 ORTHO05D006202 5.8e-06 55.5 126 31.0
vmacro02440 Vaccinium macrocarpon HOM05D000549 ORTHO05D001527 5.8e-06 55.5 64 42.2
AagrBONN_evm.TU.Sc2ySwM_228.5010 Anthoceros agrestis HOM05D000549 ORTHO05D006202 7.6e-06 55.1 115 33.0
AT3G06860 Arabidopsis thaliana HOM05D000549 ORTHO05D001527 7.6e-06 55.1 119 31.1
AT4G29010 Arabidopsis thaliana HOM05D000549 ORTHO05D001527 7.6e-06 55.1 77 37.7
BcaC07g38022 Brassica carinata HOM05D000549 ORTHO05D006202 7.6e-06 55.1 123 32.5
Cc06_g09910 Coffea canephora HOM05D000549 ORTHO05D001527 7.6e-06 55.1 77 37.7
Dinv29738 Davidia involucrata HOM05D000549 ORTHO05D001527 7.6e-06 55.1 63 41.3
Duzib211G0250 Durio zibethinus HOM05D000549 ORTHO05D001527 7.6e-06 55.1 117 33.3
PSO541G1666 Papaver somniferum HOM05D000549 ORTHO05D006202 7.6e-06 55.1 120 35.0
Pp3c16_17130 Physcomitrium patens HOM05D000549 ORTHO05D006202 7.6e-06 55.1 128 32.8
Sabra03G0052200 Salix brachista HOM05D000549 ORTHO05D006202 7.6e-06 55.1 118 33.9
SalBow7G1829 Salvia bowleyana HOM05D000549 ORTHO05D006202 7.6e-06 55.1 121 33.9
HPP92_002098 Vanilla planifolia HOM05D000549 ORTHO05D006202 7.6e-06 55.1 179 27.4
AL7G23450 Arabidopsis lyrata HOM05D000549 ORTHO05D001527 9.9e-06 54.7 77 37.7
A01p08980 Brassica napus HOM05D000549 ORTHO05D001527 9.9e-06 54.7 77 37.7
C01p10520 Brassica napus HOM05D000549 ORTHO05D001527 9.9e-06 54.7 77 37.7
BolC1t01015H Brassica oleracea HOM05D000549 ORTHO05D001527 9.9e-06 54.7 77 37.7
BraA01t00845Z Brassica rapa HOM05D000549 ORTHO05D001527 9.9e-06 54.7 77 37.7
MBI19_g34787_MAGBIO Magnolia biondii HOM05D000549 ORTHO05D001527 9.9e-06 54.7 76 38.2
Oeu013424.1 Olea europaea HOM05D000549 ORTHO05D001527 9.9e-06 54.7 77 37.7
QL12p009265 Quercus lobata HOM05D000549 ORTHO05D006202 9.9e-06 54.7 128 31.2
QL12p009692 Quercus lobata HOM05D000549 ORTHO05D006202 9.9e-06 54.7 128 31.2
SMO174G0042 Selaginella moellendorffii HOM05D000549 ORTHO05D006202 9.9e-06 54.7 124 32.3
Sc08g0007630 Simmondsia chinensis HOM05D000549 ORTHO05D001527 9.9e-06 54.7 71 39.4
Solyc06g009160.4 Solanum lycopersicum HOM05D000549 ORTHO05D001527 9.9e-06 54.7 71 36.6
Sopen06g003930 Solanum pennellii HOM05D000549 ORTHO05D001527 9.9e-06 54.7 71 36.6


User provided reference genes

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