Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_28676_v3 Cicer arietinum L. HOM05D002799 ORTHO05D008889 1.0e-134 483.4 243 100.0
Cfa026682 Carpinus fangiana HOM05D002799 ORTHO05D008889 7.7e-26 121.7 167 41.3
SMO174G0264 Selaginella moellendorffii HOM05D002799 ORTHO05D008889 1.6e-18 97.4 149 39.6
AUR62028150 Chenopodium quinoa HOM05D002799 ORTHO05D008889 1.5e-16 90.9 162 35.2
GSVIVG01024450001 Vitis vinifera HOM05D002799 ORTHO05D008889 1.5e-16 90.9 168 35.7
Rhsim03G0220500 Rhododendron simsii HOM05D000526 ORTHO05D000956 1.9e-16 90.5 135 37.8
Mapoly0046s0106 Marchantia polymorpha HOM05D002799 ORTHO05D008889 3.3e-16 89.7 145 35.9
Aa31LG8G14030 Aethionema arabicum HOM05D002799 ORTHO05D008889 5.6e-16 89.0 158 34.2
MD07G1305700 Malus domestica HOM05D002799 ORTHO05D008889 5.6e-16 89.0 157 34.4
AagrBONN_evm.TU.Sc2ySwM_362.1504 Anthoceros agrestis HOM05D002799 ORTHO05D008889 1.2e-15 87.8 166 34.3
Migut.M01834 Erythranthe guttata HOM05D002799 ORTHO05D008889 2.8e-15 86.7 135 38.5
QL09p025834 Quercus lobata HOM05D002799 ORTHO05D008889 2.8e-15 86.7 135 37.8
unitig_746.g26651 Utricularia gibba HOM05D002799 ORTHO05D008889 2.8e-15 86.7 138 34.8
SGA_v2.0_scaffold70G23573 Striga asiatica HOM05D002799 ORTHO05D008889 3.6e-15 86.3 170 35.9
Prupe.2G323800 Prunus persica HOM05D002799 ORTHO05D008889 4.7e-15 85.9 157 33.1
RcHm_v2.0_Chr1g0383841 Rosa chinensis HOM05D002799 ORTHO05D008889 4.7e-15 85.9 159 33.3
TWI60G0329 Tripterygium wilfordii HOM05D002799 ORTHO05D008889 8.0e-15 85.1 156 34.6
MSTRG.17884 Avicennia marina HOM05D002799 ORTHO05D008889 1.4e-14 84.3 134 37.3
TAR629G0193 Trochodendron aralioides HOM05D002799 ORTHO05D008889 1.4e-14 84.3 173 34.1
EL10Ac3g05099 Beta vulgaris HOM05D002799 ORTHO05D008889 1.8e-14 84.0 168 32.7
FAN03G1078 Fragaria x ananassa HOM05D002799 ORTHO05D007076 1.8e-14 84.0 148 33.8
Nn1g02011 Nelumbo nucifera HOM05D002799 ORTHO05D008889 2.3e-14 83.6 168 32.7
CsaV3_5G005340 Cucumis sativus L. HOM05D002799 ORTHO05D008889 3.1e-14 83.2 167 31.1
FAN01G1859 Fragaria x ananassa HOM05D002799 ORTHO05D007076 3.1e-14 83.2 148 33.8
Ciclev10032834m.g Citrus clementina HOM05D002799 ORTHO05D008889 4.0e-14 82.8 165 34.5
ECA236G2689 Erigeron canadensis HOM05D002799 ORTHO05D008889 4.0e-14 82.8 158 34.2
FvH4_7g33591 Fragaria vesca HOM05D002799 ORTHO05D008889 4.0e-14 82.8 148 33.8
FAN10G0267 Fragaria x ananassa HOM05D002799 ORTHO05D007076 4.0e-14 82.8 148 33.8
Nitab4.5_0002229g0090 Nicotiana tabacum HOM05D002799 ORTHO05D008889 4.0e-14 82.8 135 35.6
CANSAT21G1155 Cannabis sativa HOM05D002799 ORTHO05D008889 5.2e-14 82.4 166 31.9
FvH4_7g33580 Fragaria vesca HOM05D002799 ORTHO05D008889 5.2e-14 82.4 157 32.5
MELO3C005426.2 Cucumis melo HOM05D002799 ORTHO05D008889 6.8e-14 82.0 162 31.5
PSO675G5486 Papaver somniferum HOM05D002799 ORTHO05D008889 8.9e-14 81.6 169 31.4
CSS0012005 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D008889 1.2e-13 81.3 164 34.8
CSS0036576 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D008889 1.2e-13 81.3 164 34.8
Eucgr.K03383 Eucalyptus grandis HOM05D002799 ORTHO05D008889 1.2e-13 81.3 135 34.8
Haze_00591 Corylus avellana HOM05D002799 ORTHO05D008889 1.5e-13 80.9 135 35.6
Oeu053393.1 Olea europaea HOM05D002799 ORTHO05D008889 1.5e-13 80.9 171 33.3
CiPaw.05G237000 Carya illinoinensis HOM05D002799 ORTHO05D008889 2.0e-13 80.5 158 32.9
Nitab4.5_0000207g0420 Nicotiana tabacum HOM05D002799 ORTHO05D008889 2.0e-13 80.5 158 34.8
Cc05_g12950 Coffea canephora HOM05D002799 ORTHO05D008889 2.6e-13 80.1 134 34.3
DCAR_010548 Daucus carota HOM05D002799 ORTHO05D008889 2.6e-13 80.1 164 32.3
Gohir.A11G169200 Gossypium hirsutum HOM05D002799 ORTHO05D008889 2.6e-13 80.1 134 35.1
Gohir.D11G175400 Gossypium hirsutum HOM05D002799 ORTHO05D008889 2.6e-13 80.1 134 35.1
Gorai.007G188000 Gossypium raimondii HOM05D002799 ORTHO05D008889 2.6e-13 80.1 134 35.1
Lsat_1_v5_gn_8_74380 Lactuca sativa HOM05D002799 ORTHO05D008889 2.6e-13 80.1 160 33.1
Manes.08G164500 Manihot esculenta HOM05D002799 ORTHO05D008889 4.4e-13 79.3 135 34.1
Actinidia08736 Actinidia chinensis HOM05D002799 ORTHO05D008889 5.8e-13 79.0 163 34.4
Os06g0114650 Oryza sativa ssp. japonica HOM05D002799 ORTHO05D008889 5.8e-13 79.0 173 32.4
Lsat_1_v5_gn_5_146100 Lactuca sativa HOM05D002799 ORTHO05D008889 7.5e-13 78.6 160 32.5
Potri.019G048200 Populus trichocarpa HOM05D002799 ORTHO05D008889 7.5e-13 78.6 135 34.1
TPR.G670 Trifolium pratense HOM05D002799 ORTHO05D008889 9.8e-13 78.2 127 35.4
Sabra19G0057600 Salix brachista HOM05D002799 ORTHO05D008889 1.3e-12 77.8 136 33.8
Atru.chr12.2012 Acer truncatum HOM05D002799 ORTHO05D008889 1.7e-12 77.4 165 33.3
Ah.04g157280 Amaranthus hybridus HOM05D002799 ORTHO05D008889 1.7e-12 77.4 164 29.9
BraA09t36756Z Brassica rapa HOM05D002799 ORTHO05D008889 1.7e-12 77.4 137 35.0
PSO717G0064 Papaver somniferum HOM05D002799 ORTHO05D008889 1.7e-12 77.4 169 30.8
CAN.G1110.21 Capsicum annuum HOM05D002799 ORTHO05D008889 2.2e-12 77.0 158 33.5
Dinv29173 Davidia involucrata HOM05D002799 ORTHO05D008889 2.2e-12 77.0 163 31.9
Lj1P1032T28 Lonicera japonica HOM05D002799 ORTHO05D008889 2.2e-12 77.0 147 36.7
Sed0001745 Sechium edule HOM05D002799 ORTHO05D008889 2.2e-12 77.0 132 34.8
vmacro06499 Vaccinium macrocarpon HOM05D002799 ORTHO05D008889 2.2e-12 77.0 131 35.1
Carub.0003s3061 Capsella rubella HOM05D002799 ORTHO05D008889 2.9e-12 76.6 171 30.4
CARHR107040 Cardamine hirsuta HOM05D002799 ORTHO05D008889 2.9e-12 76.6 137 34.3
A09p11140 Brassica napus HOM05D002799 ORTHO05D008889 3.7e-12 76.3 137 34.3
ATR0829G224 Amborella trichopoda HOM05D002799 ORTHO05D008889 4.9e-12 75.9 189 29.1
Medtr8g063470 Medicago truncatula HOM05D002799 ORTHO05D008889 4.9e-12 75.9 157 31.2
PRCOL_00003203 Prasinoderma coloniale HOM05D002799 ORTHO05D008889 4.9e-12 75.9 133 36.1
Thhalv10022876m.g Eutrema salsugineum HOM05D002799 ORTHO05D008889 6.4e-12 75.5 170 29.4
MCO08G110 Micromonas commoda HOM05D002799 ORTHO05D008889 6.4e-12 75.5 140 36.4
AL3G49530 Arabidopsis lyrata HOM05D002799 ORTHO05D008889 8.3e-12 75.1 137 33.6
Sp3g29930 Schrenkiella parvula HOM05D002799 ORTHO05D008889 8.3e-12 75.1 169 29.0
AT2G16790 Arabidopsis thaliana HOM05D002799 ORTHO05D008889 1.1e-11 74.7 137 33.6
BcaC04g23004 Brassica carinata HOM05D002799 ORTHO05D008889 1.1e-11 74.7 171 29.8
C09p13130 Brassica napus HOM05D002799 ORTHO05D008889 1.1e-11 74.7 171 29.8
BolC9t54208H Brassica oleracea HOM05D002799 ORTHO05D008889 1.1e-11 74.7 171 29.8
Sopen10g002540 Solanum pennellii HOM05D002799 ORTHO05D008889 1.4e-11 74.3 158 32.9
PGSC0003DMG400024993 Solanum tuberosum HOM05D002799 ORTHO05D008889 1.9e-11 73.9 158 32.9
arahy.Tifrunner.gnm1.ann1.LMI616 Arachis hypogaea HOM05D002799 ORTHO05D008889 2.4e-11 73.6 165 30.3
Nn3g19277 Nelumbo nucifera HOM05D002799 ORTHO05D008889 2.4e-11 73.6 144 33.3
Glyma.18G134600 Glycine max HOM05D002799 ORTHO05D008889 3.2e-11 73.2 135 31.1
Lalb_Chr09g0335071 Lupinus albus HOM05D002799 ORTHO05D008889 3.2e-11 73.2 157 30.6
Solyc10g006600.4 Solanum lycopersicum HOM05D002799 ORTHO05D008889 4.1e-11 72.8 124 33.9
Thecc.04G001600 Theobroma cacao HOM05D002799 ORTHO05D008889 4.1e-11 72.8 169 31.4
Phvul.003G054200 Phaseolus vulgaris HOM05D002799 ORTHO05D008889 5.4e-11 72.4 135 31.1
arahy.Tifrunner.gnm1.ann1.31RF02 Arachis hypogaea HOM05D002799 ORTHO05D008889 7.0e-11 72.0 165 29.7
arahy.Tifrunner.gnm1.ann1.B4EAVD Arachis hypogaea HOM05D002799 ORTHO05D008889 7.0e-11 72.0 164 30.5
Phvul.003G053900 Phaseolus vulgaris HOM05D002799 ORTHO05D008889 7.0e-11 72.0 163 28.8
Cre08.g385750 Chlamydomonas reinhardtii HOM05D002799 ORTHO05D008889 1.2e-10 71.2 159 30.2
Glyma.08G289900 Glycine max HOM05D002799 ORTHO05D008889 1.2e-10 71.2 158 31.0
MD01G1233600 Malus domestica HOM05D002799 ORTHO05D008889 1.2e-10 71.2 85 38.8
arahy.Tifrunner.gnm1.ann1.10QB4Z Arachis hypogaea HOM05D002799 ORTHO05D008889 1.6e-10 70.9 165 29.7
VMungo0251G2787 Vigna mungo HOM05D002799 ORTHO05D008889 1.6e-10 70.9 138 29.7
Lj4g0019925 Lotus japonicus HOM05D002799 ORTHO05D008889 3.5e-10 69.7 125 32.0
Duzib133G0126 Durio zibethinus HOM05D002799 ORTHO05D008889 1.0e-09 68.2 157 33.8
Pp3c5_2750 Physcomitrium patens HOM05D002799 ORTHO05D008889 3.0e-09 66.6 174 30.5
Peaxi162Scf00257g00081 Petunia axillaris HOM05D002799 ORTHO05D008889 3.9e-09 66.2 142 35.2
Aqoxy7G00884 Aquilegia oxysepala HOM05D002799 ORTHO05D008889 1.9e-08 63.9 103 37.9
ClCG01G005050 Citrullus lanatus HOM05D002799 ORTHO05D008889 1.9e-08 63.9 143 30.8
PGR004G1571 Punica granatum HOM05D002799 ORTHO05D008889 3.6e-07 59.7 107 35.5
Sc19g0000240 Simmondsia chinensis HOM05D002799 ORTHO05D008889 1.8e-06 57.4 126 31.0
Rhsim03G0164800 Rhododendron simsii HOM05D002799 ORTHO05D008889 3.1e-06 56.6 96 37.5
TPR.G26908 Trifolium pratense HOM05D002799 ORTHO05D008889 5.2e-06 55.8 97 37.1


User provided reference genes

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