Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_28202_v3 Cicer arietinum L. HOM05D007014 ORTHO05D008894 4.0e-84 314.7 156 100.0
TPR.G21768 Trifolium pratense HOM05D007014 ORTHO05D008894 1.2e-75 286.6 153 91.5
Medtr4g046047 Medicago truncatula HOM05D007014 ORTHO05D008894 1.5e-75 286.2 153 89.5
Psat7g157760 Pisum sativum HOM05D007014 ORTHO05D008894 4.4e-75 284.6 153 90.2
Phvul.011G117200 Phaseolus vulgaris HOM05D007014 ORTHO05D008894 4.1e-73 278.1 153 88.2
Lj3g0024821 Lotus japonicus HOM05D007014 ORTHO05D008894 1.6e-72 276.2 153 87.6
Glyma.12G111800 Glycine max HOM05D007014 ORTHO05D008894 5.1e-71 271.2 153 83.7
Glyma.06G293600 Glycine max HOM05D007014 ORTHO05D008894 1.4e-68 263.1 153 81.7
arahy.Tifrunner.gnm1.ann1.UXPW02 Arachis hypogaea HOM05D007014 ORTHO05D008894 4.6e-64 248.1 157 77.7
arahy.Tifrunner.gnm1.ann1.YPG8JQ Arachis hypogaea HOM05D007014 ORTHO05D008894 7.8e-64 247.3 157 77.7
arahy.Tifrunner.gnm1.ann1.1ZYA2W Arachis hypogaea HOM05D007014 ORTHO05D008894 3.9e-63 245.0 154 78.6
VMungo1127G0420 Vigna mungo HOM05D007014 ORTHO05D008894 3.9e-63 245.0 177 71.2
QL08p038417 Quercus lobata HOM05D007014 ORTHO05D008894 7.3e-62 240.7 157 75.8
Dinv02170 Davidia involucrata HOM05D007014 ORTHO05D008894 6.2e-61 237.7 156 75.6
RcHm_v2.0_Chr6g0277731 Rosa chinensis HOM05D007014 ORTHO05D008894 2.4e-60 235.7 156 75.0
Prupe.3G155400 Prunus persica HOM05D007014 ORTHO05D008894 3.1e-60 235.3 156 75.6
FvH4_2g15130 Fragaria vesca HOM05D007014 ORTHO05D008894 6.9e-60 234.2 157 75.2
Manes.12G090900 Manihot esculenta HOM05D007014 ORTHO05D008894 6.9e-60 234.2 151 75.5
Cfa014594 Carpinus fangiana HOM05D007014 ORTHO05D008894 1.5e-59 233.0 156 73.7
Haze_13147 Corylus avellana HOM05D007014 ORTHO05D008894 1.5e-59 233.0 156 73.7
Nn1g06593 Nelumbo nucifera HOM05D007014 ORTHO05D008894 7.6e-59 230.7 157 73.2
Sed0017748 Sechium edule HOM05D007014 ORTHO05D008894 9.9e-59 230.3 154 73.4
Peaxi162Scf02133g00022 Petunia axillaris HOM05D007014 ORTHO05D008894 1.7e-58 229.6 155 74.2
MD09G1249800 Malus domestica HOM05D007014 ORTHO05D008894 2.9e-58 228.8 159 74.2
TWI36G0686 Tripterygium wilfordii HOM05D007014 ORTHO05D008894 8.4e-58 227.3 152 72.4
Oeu029922.1 Olea europaea HOM05D007014 ORTHO05D008894 1.1e-57 226.9 155 71.6
GSVIVG01030373001 Vitis vinifera HOM05D007014 ORTHO05D008894 1.1e-57 226.9 156 72.4
Hma1.2p1_1201F.1_g266700 Hydrangea macrophylla HOM05D007014 ORTHO05D008894 1.4e-57 226.5 157 72.0
Nitab4.5_0003022g0100 Nicotiana tabacum HOM05D007014 ORTHO05D008894 1.4e-57 226.5 155 72.9
Potri.013G134000 Populus trichocarpa HOM05D007014 ORTHO05D008894 1.4e-57 226.5 156 73.1
Potri.013G134102 Populus trichocarpa HOM05D007014 ORTHO05D008894 1.4e-57 226.5 156 73.1
FAN27G2134 Fragaria x ananassa HOM05D007014 ORTHO05D008894 1.9e-57 226.1 157 73.9
TAR629G1268 Trochodendron aralioides HOM05D007014 ORTHO05D008894 3.2e-57 225.3 154 73.4
ClCG02G017580 Citrullus lanatus HOM05D007014 ORTHO05D008894 4.2e-57 224.9 149 75.2
CANSAT78G1474 Cannabis sativa HOM05D007014 ORTHO05D008894 5.4e-57 224.6 154 72.1
AL1G13150 Arabidopsis lyrata HOM05D007014 ORTHO05D008894 1.6e-56 223.0 150 72.7
vmacro09278 Vaccinium macrocarpon HOM05D007014 ORTHO05D008894 2.1e-56 222.6 155 68.4
arahy.Tifrunner.gnm1.ann1.THUB96 Arachis hypogaea HOM05D007014 ORTHO05D008894 4.6e-56 221.5 139 79.1
BcaC07g42241 Brassica carinata HOM05D007014 ORTHO05D008894 4.6e-56 221.5 150 72.0
CAN.G486.11 Capsicum annuum HOM05D007014 ORTHO05D008894 6.0e-56 221.1 155 71.0
Carub.0001s0276 Capsella rubella HOM05D007014 ORTHO05D008894 1.0e-55 220.3 149 71.8
Ciclev10022606m.g Citrus clementina HOM05D007014 ORTHO05D008894 1.0e-55 220.3 151 71.5
MSTRG.12316 Avicennia marina HOM05D007014 ORTHO05D008894 1.8e-55 219.5 156 70.5
Sp1g02550 Schrenkiella parvula HOM05D007014 ORTHO05D008894 1.8e-55 219.5 155 69.0
Thhalv10008981m.g Eutrema salsugineum HOM05D007014 ORTHO05D008894 2.3e-55 219.2 154 72.1
Sabra13G0113800 Salix brachista HOM05D007014 ORTHO05D008894 2.3e-55 219.2 156 71.2
CARHR002980 Cardamine hirsuta HOM05D007014 ORTHO05D008894 3.9e-55 218.4 155 70.3
PGSC0003DMG400007868 Solanum tuberosum HOM05D007014 ORTHO05D008894 3.9e-55 218.4 150 72.0
SalBow1G7232 Salvia bowleyana HOM05D007014 ORTHO05D008894 5.1e-55 218.0 156 68.6
MELO3C024591.2 Cucumis melo HOM05D007014 ORTHO05D008894 6.7e-55 217.6 154 71.4
Rhsim04G0068000 Rhododendron simsii HOM05D007014 ORTHO05D008894 8.7e-55 217.2 155 67.7
FAN15G2141 Fragaria x ananassa HOM05D007014 ORTHO05D008894 1.1e-54 216.9 150 74.0
AT1G03650 Arabidopsis thaliana HOM05D007014 ORTHO05D008894 1.5e-54 216.5 150 70.7
Ciclev10022631m.g Citrus clementina HOM05D007014 ORTHO05D008894 1.5e-54 216.5 151 70.2
Cpa.g.sc34.144 Carica papaya HOM05D007014 ORTHO05D008894 1.9e-54 216.1 159 69.2
BcaC07g42236 Brassica carinata HOM05D007014 ORTHO05D008894 2.5e-54 215.7 155 68.4
PSO210G2618 Papaver somniferum HOM05D007014 ORTHO05D008894 5.6e-54 214.5 154 68.2
Aa31LG1G20970 Aethionema arabicum HOM05D007014 ORTHO05D008894 7.4e-54 214.2 150 70.0
PGSC0003DMG400007866 Solanum tuberosum HOM05D007014 ORTHO05D008894 7.4e-54 214.2 150 70.0
Lj8A113T47 Lonicera japonica HOM05D007014 ORTHO05D008894 9.6e-54 213.8 155 69.0
CSS0024097 Camellia sinensis var. sinensis HOM05D007014 ORTHO05D008894 1.3e-53 213.4 156 70.5
BcaC07g42250 Brassica carinata HOM05D007014 ORTHO05D008894 2.1e-53 212.6 154 68.2
C08p52830 Brassica napus HOM05D007014 ORTHO05D008894 2.1e-53 212.6 154 68.2
FAN24G2354 Fragaria x ananassa HOM05D007014 ORTHO05D008894 2.8e-53 212.2 156 69.9
Sopen12g005310 Solanum pennellii HOM05D007014 ORTHO05D008894 2.8e-53 212.2 150 72.0
HanXRQChr17g0553541 Helianthus annuus HOM05D007014 ORTHO05D008894 3.7e-53 211.8 154 68.8
Cc05_g06870 Coffea canephora HOM05D007014 ORTHO05D008894 4.8e-53 211.5 157 70.1
Gohir.D13G066000 Gossypium hirsutum HOM05D007014 ORTHO05D008894 6.2e-53 211.1 158 69.6
Gorai.013G075300 Gossypium raimondii HOM05D007014 ORTHO05D008894 6.2e-53 211.1 158 69.6
PSO832G4125 Papaver somniferum HOM05D007014 ORTHO05D008894 6.2e-53 211.1 154 67.5
Thecc.02G177900 Theobroma cacao HOM05D007014 ORTHO05D008894 6.2e-53 211.1 153 69.9
Aqoxy4G01010 Aquilegia oxysepala HOM05D007014 ORTHO05D008894 8.1e-53 210.7 155 65.2
BolC8t52799H Brassica oleracea HOM05D007014 ORTHO05D008894 8.1e-53 210.7 150 70.0
Solyc12g010680.3 Solanum lycopersicum HOM05D007014 ORTHO05D008894 8.1e-53 210.7 150 71.3
BraA09t42163Z Brassica rapa HOM05D007014 ORTHO05D008894 1.1e-52 210.3 150 69.3
COL.COLO4_07554 Corchorus olitorius HOM05D007014 ORTHO05D008894 1.4e-52 209.9 153 68.6
CDE02G4296 Ceratophyllum demersum HOM05D007014 ORTHO05D008894 2.4e-52 209.1 152 65.8
SGA_v2.0_scaffold307G48064 Striga asiatica HOM05D007014 ORTHO05D008894 3.1e-52 208.8 142 71.1
BcaC07g42259 Brassica carinata HOM05D007014 ORTHO05D008894 9.0e-52 207.2 154 68.2
Nitab4.5_0002575g0020 Nicotiana tabacum HOM05D007014 ORTHO05D008894 9.0e-52 207.2 172 63.4
Sc21g0002660 Simmondsia chinensis HOM05D007014 ORTHO05D008894 1.2e-51 206.8 155 67.7
Duzib052G1001 Durio zibethinus HOM05D007014 ORTHO05D008894 2.0e-51 206.1 153 69.9
Gohir.A13G056000 Gossypium hirsutum HOM05D007014 ORTHO05D008894 2.0e-51 206.1 153 69.3
MBI17_g43194_MAGBIO Magnolia biondii HOM05D007014 ORTHO05D008894 2.6e-51 205.7 137 73.0
Migut.H01076 Erythranthe guttata HOM05D007014 ORTHO05D008894 3.4e-51 205.3 150 67.3
THA.LOC104801176 Tarenaya hassleriana HOM05D007014 ORTHO05D008894 5.8e-51 204.5 149 66.4
EL10Ac9g20747 Beta vulgaris HOM05D007014 ORTHO05D008894 9.9e-51 203.8 155 63.2
CsaV3_6G013010 Cucumis sativus L. HOM05D007014 ORTHO05D008894 1.3e-50 203.4 160 65.6
ATR0680G283 Amborella trichopoda HOM05D007014 ORTHO05D008894 3.2e-49 198.7 142 67.6
unitig_21.g20401 Utricularia gibba HOM05D007014 ORTHO05D008894 3.5e-48 195.3 153 62.1
CiPaw.03G175500 Carya illinoinensis HOM05D007014 ORTHO05D008894 1.8e-47 193.0 133 70.7
HPP92_002954 Vanilla planifolia HOM05D007014 ORTHO05D008894 6.2e-45 184.5 156 60.9
Lalb_Chr01g0005301 Lupinus albus HOM05D007014 ORTHO05D008894 1.2e-43 180.3 90 91.1
Lsat_1_v5_gn_8_133041 Lactuca sativa HOM05D007014 ORTHO05D008894 2.6e-43 179.1 154 57.8
Zm00001eb044400 Zea mays HOM05D007014 ORTHO05D008894 5.8e-43 177.9 151 59.6
Zm00001eb044470 Zea mays HOM05D007014 ORTHO05D008894 3.8e-42 175.3 151 58.9
ECA233G3399 Erigeron canadensis HOM05D007880 ORTHO05D003386 3.2e-41 172.2 135 63.0
TWI36G1550 Tripterygium wilfordii HOM05D007014 ORTHO05D008894 1.2e-40 170.2 153 54.2
Actinidia30478 Actinidia chinensis HOM05D007014 ORTHO05D008894 7.4e-38 161.0 98 77.6
Os10g0500400 Oryza sativa ssp. japonica HOM05D007014 ORTHO05D008894 1.2e-35 153.7 164 49.4
Mapoly0101s0002 Marchantia polymorpha HOM05D007014 ORTHO05D008894 4.5e-35 151.8 150 54.0
Lsat_1_v5_gn_8_132641 Lactuca sativa HOM05D007014 ORTHO05D008894 7.2e-33 144.4 90 76.7
C08p52730 Brassica napus HOM05D007014 ORTHO05D008894 4.6e-32 141.7 102 70.6
A09p68280 Brassica napus HOM05D001041 ORTHO05D000846 2.3e-31 139.4 101 70.3
AagrBONN_evm.TU.Sc2ySwM_344.4393 Anthoceros agrestis HOM05D007014 ORTHO05D008894 8.8e-31 137.5 169 47.3
QL12p004320 Quercus lobata HOM05D007014 ORTHO05D008894 4.1e-28 128.6 77 75.3
Sabra13G0113700 Salix brachista HOM05D000264 ORTHO05D000152 1.3e-21 107.1 81 69.1
Sabra11G0072100 Salix brachista HOM05D000036 ORTHO05D000095 6.3e-21 104.8 81 66.7
Sabra15G0066900 Salix brachista HOM05D000036 ORTHO05D000095 6.3e-21 104.8 81 66.7
Ciclev10023600m.g Citrus clementina HOM05D007014 ORTHO05D008894 5.3e-20 101.7 76 67.1
Hund01169 Selenicereus undatus HOM05D007014 ORTHO05D008894 1.0e-18 97.4 77 63.6
AUR62037369 Chenopodium quinoa HOM05D007014 ORTHO05D008894 1.2e-16 90.5 65 66.2
DCAR_013001 Daucus carota HOM05D007014 ORTHO05D008894 1.6e-16 90.1 86 58.1
MELO3C013609.2 Cucumis melo HOM05D007014 ORTHO05D008894 5.7e-14 81.6 65 63.1
PRCOL_00005877 Prasinoderma coloniale HOM05D007014 ORTHO05D008894 1.7e-13 80.1 97 45.4
Pp3c2_27490 Physcomitrium patens HOM05D007014 ORTHO05D008894 1.1e-09 67.4 78 48.7
SalBow1G7442 Salvia bowleyana HOM05D007014 ORTHO05D008894 4.7e-08 62.0 54 55.6


User provided reference genes

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