Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_28182_v3 Cicer arietinum L. HOM05D006879 ORTHO05D008452 8.2e-51 203.4 98 100.0
Medtr3g088570 Medicago truncatula HOM05D006879 ORTHO05D008452 8.7e-45 183.3 98 87.8
Psat5g086200 Pisum sativum HOM05D006879 ORTHO05D008452 5.9e-41 170.6 98 81.6
Lj1g0005641 Lotus japonicus HOM05D006879 ORTHO05D008452 9.4e-39 163.3 97 79.4
Haze_00431 Corylus avellana HOM05D000586 ORTHO05D008452 1.2e-38 162.9 96 77.1
Cfa016025 Carpinus fangiana HOM05D006879 ORTHO05D008452 2.1e-38 162.2 96 78.1
arahy.Tifrunner.gnm1.ann1.0SZ2NS Arachis hypogaea HOM05D006879 ORTHO05D008452 4.6e-38 161.0 94 78.7
arahy.Tifrunner.gnm1.ann1.61DA9N Arachis hypogaea HOM05D006879 ORTHO05D008452 4.6e-38 161.0 94 78.7
arahy.Tifrunner.gnm1.ann1.GV74HV Arachis hypogaea HOM05D006879 ORTHO05D008452 4.6e-38 161.0 94 78.7
Phvul.008G160300 Phaseolus vulgaris HOM05D006879 ORTHO05D008452 6.1e-38 160.6 97 77.3
CiPaw.06G031600 Carya illinoinensis HOM05D006879 ORTHO05D008452 1.0e-37 159.8 88 83.0
VMungo0647G0471 Vigna mungo HOM05D006879 ORTHO05D008452 1.8e-37 159.1 97 75.3
Prupe.1G494800 Prunus persica HOM05D006879 ORTHO05D008452 3.0e-37 158.3 95 75.8
Gohir.D01G180300 Gossypium hirsutum HOM05D006879 ORTHO05D008452 6.7e-37 157.1 97 74.2
QL09p034330 Quercus lobata HOM05D006879 ORTHO05D008452 6.7e-37 157.1 96 74.0
QL09p034374 Quercus lobata HOM05D006879 ORTHO05D008452 6.7e-37 157.1 96 74.0
Ciclev10002899m.g Citrus clementina HOM05D006879 ORTHO05D008452 8.8e-37 156.8 97 73.2
Gohir.A01G189200 Gossypium hirsutum HOM05D006879 ORTHO05D008452 1.5e-36 156.0 97 73.2
Manes.02G164300 Manihot esculenta HOM05D006879 ORTHO05D008452 1.5e-36 156.0 90 76.7
Lsat_1_v5_gn_6_93360 Lactuca sativa HOM05D006879 ORTHO05D008452 2.0e-36 155.6 97 76.3
Lalb_Chr11g0066061 Lupinus albus HOM05D006879 ORTHO05D008452 2.5e-36 155.2 97 75.3
Thecc.08G126700 Theobroma cacao HOM05D006879 ORTHO05D008452 4.3e-36 154.5 97 73.2
MELO3C010476.2 Cucumis melo HOM05D006879 ORTHO05D008452 7.4e-36 153.7 96 69.8
Glyma.14G151700 Glycine max HOM05D006879 ORTHO05D008452 7.4e-36 153.7 99 73.7
CsaV3_4G028290 Cucumis sativus L. HOM05D006879 ORTHO05D008452 9.7e-36 153.3 96 68.8
AL2G37750 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 1.3e-35 152.9 97 70.1
Dinv07211 Davidia involucrata HOM05D006879 ORTHO05D008452 1.7e-35 152.5 97 71.1
HanXRQChr03g0088981 Helianthus annuus HOM05D006879 ORTHO05D008452 1.7e-35 152.5 97 73.2
COL.COLO4_03398 Corchorus olitorius HOM05D006879 ORTHO05D008452 2.2e-35 152.1 97 72.2
FvH4_2g27080 Fragaria vesca HOM05D006879 ORTHO05D008452 2.2e-35 152.1 97 71.1
Gorai.002G222300 Gossypium raimondii HOM05D006879 ORTHO05D008452 2.2e-35 152.1 97 72.2
Hma1.2p1_0054F.1_g031040 Hydrangea macrophylla HOM05D006879 ORTHO05D008452 2.8e-35 151.8 97 70.1
Aqoxy6G00233 Aquilegia oxysepala HOM05D006879 ORTHO05D008452 3.7e-35 151.4 98 70.4
FAN20G0093 Fragaria x ananassa HOM05D006879 ORTHO05D008452 3.7e-35 151.4 97 71.1
Dinv27305 Davidia involucrata HOM05D006879 ORTHO05D008452 4.8e-35 151.0 88 78.4
Sc02g0005010 Simmondsia chinensis HOM05D006879 ORTHO05D008452 4.8e-35 151.0 87 75.9
AT1G77540 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 8.2e-35 150.2 97 69.1
Duzib041G0788 Durio zibethinus HOM05D006879 ORTHO05D008452 8.2e-35 150.2 97 70.1
FAN24G0949 Fragaria x ananassa HOM05D006879 ORTHO05D008452 8.2e-35 150.2 97 70.1
Atru.chr13.1490 Acer truncatum HOM05D006879 ORTHO05D008452 1.1e-34 149.8 99 72.7
RcHm_v2.0_Chr6g0295961 Rosa chinensis HOM05D006879 ORTHO05D008452 1.8e-34 149.1 97 69.1
Nn5g28321 Nelumbo nucifera HOM05D006879 ORTHO05D008452 3.1e-34 148.3 97 67.0
Hund17297 Selenicereus undatus HOM05D006879 ORTHO05D008452 5.3e-34 147.5 88 76.1
TAR628G0734 Trochodendron aralioides HOM05D006879 ORTHO05D008452 5.3e-34 147.5 89 73.0
Cc10_g12010 Coffea canephora HOM05D006879 ORTHO05D008452 6.9e-34 147.1 97 69.1
PGR083G2398 Punica granatum HOM05D006879 ORTHO05D008452 6.9e-34 147.1 90 71.1
TPR.G20905 Trifolium pratense HOM05D006879 ORTHO05D008452 6.9e-34 147.1 73 95.9
Eucgr.F03793 Eucalyptus grandis HOM05D006879 ORTHO05D008452 9.1e-34 146.7 90 70.0
Potri.005G178501 Populus trichocarpa HOM05D006879 ORTHO05D008452 9.1e-34 146.7 94 69.1
MD15G1347100 Malus domestica HOM05D006879 ORTHO05D008452 1.2e-33 146.4 96 72.9
ECA240G3722 Erigeron canadensis HOM05D006879 ORTHO05D008452 1.5e-33 146.0 97 72.2
Thhalv10019334m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 1.5e-33 146.0 90 71.1
ClCG11G015720 Citrullus lanatus HOM05D006879 ORTHO05D008452 2.0e-33 145.6 109 61.5
CSS0011792 Camellia sinensis var. sinensis HOM05D006879 ORTHO05D008452 2.6e-33 145.2 97 67.0
AUR62014329 Chenopodium quinoa HOM05D006879 ORTHO05D008452 3.4e-33 144.8 93 69.9
Nitab4.5_0004334g0040 Nicotiana tabacum HOM05D006879 ORTHO05D008452 3.4e-33 144.8 97 71.1
TWI32G0821 Tripterygium wilfordii HOM05D006879 ORTHO05D008452 3.4e-33 144.8 98 68.4
Sp5g32720 Schrenkiella parvula HOM05D006879 ORTHO05D008452 4.5e-33 144.4 97 68.0
Sed0023358 Sechium edule HOM05D006879 ORTHO05D008452 4.5e-33 144.4 97 64.9
ATR0584G146 Amborella trichopoda HOM05D006879 ORTHO05D008452 5.9e-33 144.1 87 72.4
Solyc08g067800.3 Solanum lycopersicum HOM05D006879 ORTHO05D008452 5.9e-33 144.1 97 67.0
Sopen08g021740 Solanum pennellii HOM05D006879 ORTHO05D008452 5.9e-33 144.1 97 67.0
AT1G21770 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 7.7e-33 143.7 90 71.1
Actinidia03466 Actinidia chinensis HOM05D006879 ORTHO05D008452 1.7e-32 142.5 97 64.9
Aa31LG4G7630 Aethionema arabicum HOM05D006879 ORTHO05D008452 1.7e-32 142.5 97 66.0
BcaC05g26099 Brassica carinata HOM05D006879 ORTHO05D008452 1.7e-32 142.5 96 69.8
Nitab4.5_0005583g0080 Nicotiana tabacum HOM05D006879 ORTHO05D008452 2.2e-32 142.1 97 69.1
EL10Ac1g01022 Beta vulgaris HOM05D006879 ORTHO05D008452 2.9e-32 141.7 91 70.3
BcaB02g07111 Brassica carinata HOM05D006879 ORTHO05D008452 2.9e-32 141.7 97 67.0
BraA07t30441Z Brassica rapa HOM05D006879 ORTHO05D008452 2.9e-32 141.7 97 67.0
Carub.0002s2444 Capsella rubella HOM05D006879 ORTHO05D008452 2.9e-32 141.7 97 68.0
CAN.G21.5 Capsicum annuum HOM05D006879 ORTHO05D008452 2.9e-32 141.7 91 68.1
AUR62019072 Chenopodium quinoa HOM05D006879 ORTHO05D008452 5.0e-32 141.0 93 66.7
Migut.C01128 Erythranthe guttata HOM05D006879 ORTHO05D008452 5.0e-32 141.0 92 70.7
A07p27940 Brassica napus HOM05D006879 ORTHO05D008452 8.5e-32 140.2 97 66.0
BolC5t30777H Brassica oleracea HOM05D006879 ORTHO05D008452 8.5e-32 140.2 96 68.8
CDE07G0981 Ceratophyllum demersum HOM05D006879 ORTHO05D008452 8.5e-32 140.2 97 66.0
MSTRG.25382 Avicennia marina HOM05D006879 ORTHO05D008452 1.9e-31 139.0 91 68.1
BcaC08g45472 Brassica carinata HOM05D006879 ORTHO05D008452 1.9e-31 139.0 97 66.0
BolC6t38260H Brassica oleracea HOM05D006879 ORTHO05D008452 1.9e-31 139.0 97 66.0
AL1G34970 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 2.5e-31 138.7 90 68.9
C06p31190 Brassica napus HOM05D006879 ORTHO05D008452 2.5e-31 138.7 97 66.0
BcaB07g32176 Brassica carinata HOM05D006879 ORTHO05D008452 4.2e-31 137.9 96 67.7
Carub.0001s2123 Capsella rubella HOM05D006879 ORTHO05D008452 4.2e-31 137.9 90 67.8
Thhalv10009164m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 7.2e-31 137.1 90 67.8
Aa31LG7G5750 Aethionema arabicum HOM05D006879 ORTHO05D008452 1.6e-30 136.0 90 67.8
CARHR071070 Cardamine hirsuta HOM05D006879 ORTHO05D008452 1.6e-30 136.0 90 67.8
Sp1g19330 Schrenkiella parvula HOM05D006879 ORTHO05D008452 2.1e-30 135.6 96 65.6
A06p17880 Brassica napus HOM05D006879 ORTHO05D008452 2.7e-30 135.2 96 66.7
BraA06t24878Z Brassica rapa HOM05D006879 ORTHO05D008452 2.7e-30 135.2 96 66.7
CANSAT56G2034 Cannabis sativa HOM05D006879 ORTHO05D008452 2.7e-30 135.2 103 66.0
SGA_v2.0_scaffold52G18964 Striga asiatica HOM05D006879 ORTHO05D008452 2.7e-30 135.2 95 66.3
C05p20780 Brassica napus HOM05D006879 ORTHO05D008452 6.1e-30 134.0 96 67.7
PSO528G0112 Papaver somniferum HOM05D006879 ORTHO05D008452 7.9e-30 133.7 95 64.2
THA.LOC104813659 Tarenaya hassleriana HOM05D006879 ORTHO05D008452 3.9e-29 131.3 97 62.9
FAN15G3590 Fragaria x ananassa HOM05D006879 ORTHO05D008452 1.5e-28 129.4 132 50.8
PSO170G0506 Papaver somniferum HOM05D006879 ORTHO05D008452 3.3e-28 128.3 95 64.2
Cpa.g.sc418.6 Carica papaya HOM05D006879 ORTHO05D008452 4.1e-26 121.3 73 74.0
vmacro00838 Vaccinium macrocarpon HOM05D006879 ORTHO05D008452 1.3e-24 116.3 73 71.2
RhsimUnG0092300 Rhododendron simsii HOM05D000586 ORTHO05D008452 2.9e-24 115.2 73 68.5
Ah.05g171050 Amaranthus hybridus HOM05D006879 ORTHO05D008452 6.5e-24 114.0 75 70.7
CAN.G21.4 Capsicum annuum HOM05D006879 ORTHO05D008452 8.5e-24 113.6 97 50.5
GSVIVG01008857001 Vitis vinifera HOM05D006879 ORTHO05D008452 2.1e-22 109.0 68 72.1
HanXRQChr01g0005251 Helianthus annuus HOM05D006879 ORTHO05D008452 8.8e-21 103.6 60 78.3
Oeu059437.1 Olea europaea HOM05D006879 ORTHO05D008452 1.5e-20 102.8 68 66.2
HanXRQChr04g0101301 Helianthus annuus HOM05D006879 ORTHO05D008452 3.3e-20 101.7 58 81.0
Pp3c12_9490 Physcomitrium patens HOM05D006879 ORTHO05D008452 3.3e-20 101.7 102 51.0
SMO146G0286 Selaginella moellendorffii HOM05D006879 ORTHO05D008452 3.3e-20 101.7 92 51.1
Peaxi162Scf00332g00015 Petunia axillaris HOM05D006879 ORTHO05D008452 1.8e-18 95.9 63 69.8
Zm00001eb082730 Zea mays HOM05D006879 ORTHO05D008452 5.3e-18 94.4 95 49.5
SEGI_19819 Sequoiadendron giganteum HOM05D006879 ORTHO05D008452 1.0e-16 90.1 83 54.2
Mapoly0075s0062 Marchantia polymorpha HOM05D006879 ORTHO05D008452 1.9e-15 85.9 104 40.4
AagrBONN_evm.TU.Sc2ySwM_117.2168 Anthoceros agrestis HOM05D006879 ORTHO05D008452 2.5e-15 85.5 91 49.5
Os04g0431300 Oryza sativa ssp. japonica HOM05D006879 ORTHO05D008452 1.8e-13 79.3 62 56.5
HanXRQChr09g0244451 Helianthus annuus HOM05D006879 ORTHO05D008452 4.4e-12 74.7 44 75.0
Eucgr.H03925 Eucalyptus grandis HOM05D006879 ORTHO05D008452 5.7e-12 74.3 46 69.6
Eucgr.H03927 Eucalyptus grandis HOM05D006879 ORTHO05D008452 6.3e-11 70.9 86 44.2
CBR_g36233 Chara braunii HOM05D006879 ORTHO05D008452 3.1e-10 68.6 63 46.0
MCO09G076 Micromonas commoda HOM05D006879 ORTHO05D008452 1.9e-07 59.3 83 38.6


User provided reference genes

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