Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_28055_v3 Cicer arietinum L. HOM05D003928 ORTHO05D007133 1.9e-102 375.9 205 100.0
Ca_25459_v3 Cicer arietinum L. HOM05D003928 ORTHO05D007133 2.0e-59 233.0 300 55.0
Ca_25458_v3 Cicer arietinum L. HOM05D003928 ORTHO05D007133 2.2e-58 229.6 300 54.3
Medtr8g104380 Medicago truncatula HOM05D003928 ORTHO05D007133 2.2e-42 176.4 298 43.6
Psat7g010840 Pisum sativum HOM05D003928 ORTHO05D007133 2.4e-36 156.4 295 43.1
TPR.G32710 Trifolium pratense HOM05D003928 ORTHO05D007133 7.0e-36 154.8 298 43.6
Lj6g0007940 Lotus japonicus HOM05D003928 ORTHO05D007133 4.2e-33 145.6 299 39.1
VMungo0251G0737 Vigna mungo HOM05D003928 ORTHO05D007133 1.7e-29 133.7 131 61.8
Lalb_Chr24g0397881 Lupinus albus HOM05D003928 ORTHO05D007133 1.2e-27 127.5 310 34.2
Lalb_Chr22g0353161 Lupinus albus HOM05D003928 ORTHO05D007133 3.8e-26 122.5 131 58.0
arahy.Tifrunner.gnm1.ann1.2TSU5I Arachis hypogaea HOM05D003928 ORTHO05D007133 4.7e-24 115.5 157 54.8
Glyma.05G237400 Glycine max HOM05D003928 ORTHO05D007133 4.0e-23 112.5 133 57.1
Cfa019749 Carpinus fangiana HOM05D003928 ORTHO05D007133 5.9e-19 98.6 179 42.5
CiPaw.16G051800 Carya illinoinensis HOM05D003928 ORTHO05D007133 9.5e-17 91.3 133 51.9
QL10p025782 Quercus lobata HOM05D003928 ORTHO05D007133 2.8e-16 89.7 135 47.4
Glyma.08G044600 Glycine max HOM05D003928 ORTHO05D007133 3.4e-14 82.8 272 29.8
MD06G1218100 Malus domestica HOM05D003928 ORTHO05D007133 1.4e-12 77.4 133 42.9
Prupe.5G223200 Prunus persica HOM05D003928 ORTHO05D007133 3.1e-12 76.3 133 42.1
Dinv15697 Davidia involucrata HOM05D003928 ORTHO05D007133 2.0e-11 73.6 119 42.9
Sabra12G0038700 Salix brachista HOM05D003928 ORTHO05D007133 4.5e-11 72.4 127 40.9
Haze_18702 Corylus avellana HOM05D003928 ORTHO05D007133 1.0e-10 71.2 169 41.4
TWI15G0374 Tripterygium wilfordii HOM05D003928 ORTHO05D007133 1.3e-10 70.9 132 40.9
Duzib068G1360 Durio zibethinus HOM05D003928 ORTHO05D007133 3.8e-10 69.3 124 41.1
Atru.chr9.882 Acer truncatum HOM05D003928 ORTHO05D007133 1.5e-09 67.4 136 39.0
MD14G1228200 Malus domestica HOM05D003928 ORTHO05D007133 1.9e-09 67.0 133 39.1
FAN08G0705 Fragaria x ananassa HOM05D003928 ORTHO05D007133 3.3e-09 66.2 175 30.9
CiPaw.16G088000 Carya illinoinensis HOM05D003928 ORTHO05D007133 9.5e-09 64.7 138 40.6
FAN13G0494 Fragaria x ananassa HOM05D003928 ORTHO05D007133 9.5e-09 64.7 178 33.1
FvH4_5g11850 Fragaria vesca HOM05D003928 ORTHO05D007133 1.2e-08 64.3 175 30.9
FAN18G2650 Fragaria x ananassa HOM05D003928 ORTHO05D007133 1.2e-08 64.3 175 30.9
FAN18G3471 Fragaria x ananassa HOM05D003928 ORTHO05D007133 1.2e-08 64.3 175 30.9
Thecc.03G037800 Theobroma cacao HOM05D003928 ORTHO05D007133 1.2e-08 64.3 126 38.9
RcHm_v2.0_Chr7g0185741 Rosa chinensis HOM05D003928 ORTHO05D007133 3.6e-08 62.8 133 39.1
VMungo1127G1783 Vigna mungo HOM05D003928 ORTHO05D007133 3.6e-08 62.8 65 56.9
Duzib084G0756 Durio zibethinus HOM05D003928 ORTHO05D007133 4.7e-08 62.4 121 40.5
Potri.012G055000 Populus trichocarpa HOM05D003928 ORTHO05D007133 4.7e-08 62.4 74 51.4
PGR044G0175 Punica granatum HOM05D003928 ORTHO05D007133 6.1e-08 62.0 135 37.0
Sabra15G0040100 Salix brachista HOM05D003928 ORTHO05D007133 6.1e-08 62.0 125 37.6
TWI81G1044 Tripterygium wilfordii HOM05D003928 ORTHO05D007133 3.0e-07 59.7 136 39.0
Duzib205G0965 Durio zibethinus HOM05D003928 ORTHO05D007133 4.0e-07 59.3 166 35.5
Potri.015G045600 Populus trichocarpa HOM05D003928 ORTHO05D007133 6.8e-07 58.5 125 38.4
GSVIVG01008318001 Vitis vinifera HOM05D003928 ORTHO05D007133 8.9e-07 58.2 126 38.1
MELO3C002096.2 Cucumis melo HOM05D003928 ORTHO05D007133 1.5e-06 57.4 134 35.1
CANSAT80G1256 Cannabis sativa HOM05D003928 ORTHO05D007133 2.6e-06 56.6 129 37.2
TAR629G1872 Trochodendron aralioides HOM05D003928 ORTHO05D007133 4.4e-06 55.8 172 36.6
Nitab4.5_0008233g0010 Nicotiana tabacum HOM05D003928 ORTHO05D007133 9.8e-06 54.7 168 33.9


User provided reference genes

Program Settings