Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_27966_v3 Cicer arietinum L. HOM05D003079 ORTHO05D003461 4.2e-122 441.4 233 100.0
Medtr3g009740 Medicago truncatula HOM05D003079 ORTHO05D003461 6.0e-44 181.8 224 53.6
TPR.G16690 Trifolium pratense HOM05D003079 ORTHO05D003461 2.2e-41 173.3 199 55.8
Psat5g231200 Pisum sativum HOM05D003079 ORTHO05D003461 1.0e-35 154.5 226 52.7
Glyma.04G113700 Glycine max HOM05D003079 ORTHO05D003461 9.7e-34 147.9 218 48.2
VMungo1080G0483 Vigna mungo HOM05D003079 ORTHO05D003461 9.7e-34 147.9 219 50.7
Lalb_Chr15g0079931 Lupinus albus HOM05D003079 ORTHO05D003461 1.7e-33 147.1 223 47.5
Phvul.L001609 Phaseolus vulgaris HOM05D003079 ORTHO05D003461 8.2e-33 144.8 220 50.0
Glyma.06G321400 Glycine max HOM05D003079 ORTHO05D003461 1.1e-32 144.4 225 46.7
arahy.Tifrunner.gnm1.ann1.WAW8B8 Arachis hypogaea HOM05D003079 ORTHO05D003461 2.6e-31 139.8 218 44.5
Lj3g0020124 Lotus japonicus HOM05D003079 ORTHO05D003461 1.3e-30 137.5 230 43.5
Lalb_Chr04g0259441 Lupinus albus HOM05D003079 ORTHO05D003461 3.6e-28 129.4 213 45.5
arahy.Tifrunner.gnm1.ann1.FC0SK2 Arachis hypogaea HOM05D003079 ORTHO05D003461 6.7e-27 125.2 218 42.7
Ca_11646_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 6.7e-27 125.2 91 76.9
Ca_26322_v3 Cicer arietinum L. HOM05D019996 ORTHO05D000213 1.9e-21 107.1 75 76.0
Ca_09071_v3 Cicer arietinum L. HOM05D000222 ORTHO05D003461 3.5e-15 86.3 132 47.0
Ca_18897_v3 Cicer arietinum L. HOM05D003079 ORTHO05D003461 3.8e-14 82.8 130 46.2
CiPaw.12G142800 Carya illinoinensis HOM05D003079 ORTHO05D003461 8.0e-12 75.1 149 44.3
Dinv19642 Davidia involucrata HOM05D003079 ORTHO05D003461 1.8e-11 73.9 149 43.6
CiPaw.12G142700 Carya illinoinensis HOM05D003079 ORTHO05D003461 4.0e-11 72.8 149 43.6
Haze_09917 Corylus avellana HOM05D003079 ORTHO05D003461 8.8e-11 71.6 142 43.0
Thecc.07G001500 Theobroma cacao HOM05D003079 ORTHO05D003461 8.8e-11 71.6 224 33.0
Ciclev10007777m.g Citrus clementina HOM05D003079 ORTHO05D003461 1.5e-10 70.9 143 41.3
CSS0018146 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 2.6e-10 70.1 138 43.5
Ca_11540_v3 Cicer arietinum L. HOM05D000222 ORTHO05D003997 4.4e-10 69.3 39 87.2
Ca_30994_v3 Cicer arietinum L. HOM05D000222 ORTHO05D003997 4.4e-10 69.3 39 87.2
Duzib170G0955 Durio zibethinus HOM05D003079 ORTHO05D003461 5.7e-10 68.9 215 33.0
Duzib268G0697 Durio zibethinus HOM05D003079 ORTHO05D003461 7.5e-10 68.6 216 31.0
COL.COLO4_07791 Corchorus olitorius HOM05D003079 ORTHO05D003461 1.3e-09 67.8 150 39.3
Actinidia31529 Actinidia chinensis HOM05D003079 ORTHO05D003461 3.7e-09 66.2 217 33.2
Gohir.D11G286600 Gossypium hirsutum HOM05D003079 ORTHO05D003461 3.7e-09 66.2 143 37.8
Gorai.007G310000 Gossypium raimondii HOM05D003079 ORTHO05D003461 3.7e-09 66.2 143 37.8
Migut.H01709 Erythranthe guttata HOM05D003079 ORTHO05D003461 4.8e-09 65.9 133 42.9
Gohir.A13G128400 Gossypium hirsutum HOM05D003079 ORTHO05D003461 4.8e-09 65.9 215 33.0
Sabra11G0137800 Salix brachista HOM05D003079 ORTHO05D003461 4.8e-09 65.9 211 34.6
Duzib213G0264 Durio zibethinus HOM05D003079 ORTHO05D003461 6.3e-09 65.5 222 31.5
Gorai.013G147800 Gossypium raimondii HOM05D003079 ORTHO05D003461 6.3e-09 65.5 215 33.0
Dinv40917 Davidia involucrata HOM05D003079 ORTHO05D003461 8.2e-09 65.1 128 42.2
Gohir.D13G131800 Gossypium hirsutum HOM05D003079 ORTHO05D003461 8.2e-09 65.1 215 32.6
Lj8C183T12 Lonicera japonica HOM05D003079 ORTHO05D003461 8.2e-09 65.1 136 39.7
Potri.001G472000 Populus trichocarpa HOM05D003079 ORTHO05D003461 1.1e-08 64.7 206 35.0
Manes.05G204700 Manihot esculenta HOM05D003079 ORTHO05D003461 1.8e-08 63.9 203 33.0
Cpa.g.sc12.64 Carica papaya HOM05D003079 ORTHO05D003461 2.4e-08 63.5 239 31.0
Gohir.A11G276200 Gossypium hirsutum HOM05D003079 ORTHO05D003461 3.1e-08 63.2 217 30.9
QL08p000493 Quercus lobata HOM05D003079 ORTHO05D003461 5.3e-08 62.4 208 33.7
Lj1A901G36 Lonicera japonica HOM05D003079 ORTHO05D003461 1.6e-07 60.8 217 32.3
Sopen07g034350 Solanum pennellii HOM05D003079 ORTHO05D003461 1.6e-07 60.8 139 38.1
CSS0022300 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 2.0e-07 60.5 163 37.4
CSS0035812 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 2.0e-07 60.5 163 37.4
Hma1.2p1_0193F.1_g084340 Hydrangea macrophylla HOM05D003079 ORTHO05D003461 2.7e-07 60.1 245 29.8
Potri.011G169000 Populus trichocarpa HOM05D003079 ORTHO05D003461 2.7e-07 60.1 212 34.9
Peaxi162Scf00232g00614 Petunia axillaris HOM05D003079 ORTHO05D003461 7.7e-07 58.5 146 37.0
TAR611G0001 Trochodendron aralioides HOM05D003079 ORTHO05D003461 7.7e-07 58.5 137 37.2
Actinidia30350 Actinidia chinensis HOM05D003079 ORTHO05D003461 1.0e-06 58.2 133 39.1
MELO3C014061.2 Cucumis melo HOM05D003079 ORTHO05D003461 1.0e-06 58.2 139 35.3
CsaV3_3G003800 Cucumis sativus L. HOM05D003079 ORTHO05D003461 1.0e-06 58.2 139 35.3
Prupe.6G035500 Prunus persica HOM05D003079 ORTHO05D003461 1.3e-06 57.8 240 31.2
Rhsim04G0008000 Rhododendron simsii HOM05D003079 ORTHO05D003461 1.7e-06 57.4 143 40.6
Nn1g07629 Nelumbo nucifera HOM05D003079 ORTHO05D003461 2.2e-06 57.0 144 36.8
Sed0022199 Sechium edule HOM05D003079 ORTHO05D003461 3.8e-06 56.2 137 35.0
TWI38G1795 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 5.0e-06 55.8 208 30.3
ClCG00G001200 Citrullus lanatus HOM05D003079 ORTHO05D003461 8.5e-06 55.1 139 34.5
ClCG10G003820 Citrullus lanatus HOM05D003079 ORTHO05D003461 8.5e-06 55.1 139 34.5
ClCG10G003930 Citrullus lanatus HOM05D003079 ORTHO05D003461 8.5e-06 55.1 139 34.5


User provided reference genes

Program Settings