Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_27881_v3 Cicer arietinum L. HOM05D005720 ORTHO05D006984 0.0e+00 1955.3 972 100.0
TPR.G16464 Trifolium pratense HOM05D005720 ORTHO05D006984 0.0e+00 1468.8 980 76.6
Medtr8g058270 Medicago truncatula HOM05D005720 ORTHO05D006984 0.0e+00 1429.8 1002 74.6
Psat4g140280 Pisum sativum HOM05D005720 ORTHO05D006984 0.0e+00 1219.9 864 73.4
Lj3g0007394 Lotus japonicus HOM05D005720 ORTHO05D006984 0.0e+00 1134.8 990 63.6
Glyma.16G069100 Glycine max HOM05D005720 ORTHO05D006984 1.6e-303 1046.2 994 59.9
Lalb_Chr06g0161451 Lupinus albus HOM05D005720 ORTHO05D006984 1.4e-288 996.5 987 56.8
arahy.Tifrunner.gnm1.ann1.35A5BC Arachis hypogaea HOM05D005720 ORTHO05D006984 1.9e-277 959.5 1044 54.2
arahy.Tifrunner.gnm1.ann1.YA4Y9S Arachis hypogaea HOM05D005720 ORTHO05D006984 3.3e-277 958.7 1044 54.2
VMungo1127G0215 Vigna mungo HOM05D005720 ORTHO05D006984 4.0e-251 872.1 975 54.1
QL09p011597 Quercus lobata HOM05D005720 ORTHO05D006984 6.3e-236 821.6 1025 48.8
Cfa016346 Carpinus fangiana HOM05D005720 ORTHO05D006984 2.5e-232 809.7 1019 48.5
CiPaw.06G006200 Carya illinoinensis HOM05D005720 ORTHO05D006984 1.7e-228 797.0 1004 48.7
Manes.06G155900 Manihot esculenta HOM05D005720 ORTHO05D006984 1.4e-219 767.3 1002 46.2
MD07G1283200 Malus domestica HOM05D005720 ORTHO05D006984 7.0e-219 765.0 1017 46.9
Potri.012G033800 Populus trichocarpa HOM05D005720 ORTHO05D006984 1.0e-217 761.1 1015 45.9
MD01G1213400 Malus domestica HOM05D005720 ORTHO05D006984 3.0e-214 749.6 1010 46.2
Thecc.03G190400 Theobroma cacao HOM05D005720 ORTHO05D006984 3.4e-213 746.1 1018 46.1
Prupe.2G305400 Prunus persica HOM05D005720 ORTHO05D006984 8.3e-212 741.5 1022 45.7
GSVIVG01028746001 Vitis vinifera HOM05D005720 ORTHO05D006984 1.1e-208 731.1 993 46.1
TWI39G1277 Tripterygium wilfordii HOM05D005720 ORTHO05D006984 4.2e-208 729.2 1018 45.1
Sabra12G0022900 Salix brachista HOM05D005720 ORTHO05D006984 2.1e-207 726.9 1006 45.6
Phvul.011G167400 Phaseolus vulgaris HOM05D005720 ORTHO05D006984 6.8e-206 721.8 658 61.9
Dinv28352 Davidia involucrata HOM05D005720 ORTHO05D006984 9.5e-200 701.4 1001 44.5
Duzib084G1243 Durio zibethinus HOM05D005720 ORTHO05D006984 4.7e-199 699.1 1018 45.8
COL.COLO4_24780 Corchorus olitorius HOM05D005720 ORTHO05D006984 2.3e-198 696.8 1070 43.6
FAN01G1865 Fragaria x ananassa HOM05D005720 ORTHO05D006984 5.2e-198 695.7 1023 44.4
FvH4_7g30790 Fragaria vesca HOM05D005720 ORTHO05D006984 9.8e-197 691.4 1019 44.2
FAN06G1427 Fragaria x ananassa HOM05D005720 ORTHO05D006984 4.9e-196 689.1 1028 44.6
FAN06G3446 Fragaria x ananassa HOM05D005720 ORTHO05D006984 4.9e-196 689.1 1025 44.7
Gohir.D09G177900 Gossypium hirsutum HOM05D005720 ORTHO05D006984 2.4e-195 686.8 1005 44.7
Gohir.A09G183200 Gossypium hirsutum HOM05D005720 ORTHO05D006984 4.1e-195 686.0 1005 44.8
Haze_00092 Corylus avellana HOM05D005720 ORTHO05D006984 2.9e-193 679.9 1019 44.1
FAN03G0014 Fragaria x ananassa HOM05D005720 ORTHO05D006984 3.3e-192 676.4 1011 43.8
Gorai.006G200000 Gossypium raimondii HOM05D005720 ORTHO05D006984 3.6e-191 672.9 995 44.7
CsaV3_4G002370 Cucumis sativus L. HOM05D005720 ORTHO05D006984 4.6e-178 629.4 1020 42.0
FAN10G0387 Fragaria x ananassa HOM05D005720 ORTHO05D006984 4.7e-175 619.4 955 43.4
Nn1g01775 Nelumbo nucifera HOM05D005720 ORTHO05D006984 2.9e-172 610.1 1020 41.7
MD01G1213200 Malus domestica HOM05D005720 ORTHO05D006984 6.4e-172 609.0 873 43.9
Cpa.g.sc3.32 Carica papaya HOM05D005720 ORTHO05D006984 8.4e-172 608.6 1007 41.0
RcHm_v2.0_Chr1g0379731 Rosa chinensis HOM05D005720 ORTHO05D006984 5.4e-171 605.9 886 43.8
Hund11695 Selenicereus undatus HOM05D005720 ORTHO05D006984 7.8e-170 602.1 990 42.0
AUR62031469 Chenopodium quinoa HOM05D005720 ORTHO05D006984 5.1e-169 599.4 1011 41.3
MELO3C017804.2 Cucumis melo HOM05D005720 ORTHO05D006984 4.3e-168 596.3 982 40.7
Aqoxy7G00210 Aquilegia oxysepala HOM05D005720 ORTHO05D006984 3.6e-167 593.2 1020 41.4
EL10Ac3g05366 Beta vulgaris HOM05D005720 ORTHO05D006984 6.2e-167 592.4 1003 41.4
Hma1.2p1_0142F.1_g064130 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 8.1e-167 592.0 1004 40.0
Oeu037117.2 Olea europaea HOM05D005720 ORTHO05D006984 7.8e-162 575.5 1000 39.9
PSO135G0324 Papaver somniferum HOM05D005720 ORTHO05D006984 1.7e-161 574.3 1002 38.8
Psat0s2250g0040 Pisum sativum HOM05D005720 ORTHO05D006984 1.1e-160 571.6 390 76.9
Rhsim03G0197100 Rhododendron simsii HOM05D005720 ORTHO05D006984 4.3e-160 569.7 1017 39.5
FAN10G2558 Fragaria x ananassa HOM05D005720 ORTHO05D006984 7.3e-160 568.9 827 43.9
Sc13g0009450 Simmondsia chinensis HOM05D005720 ORTHO05D006984 3.6e-159 566.6 1002 39.5
Ah.07g206170 Amaranthus hybridus HOM05D005720 ORTHO05D006984 4.0e-158 563.1 1019 38.9
HanXRQChr01g0031161 Helianthus annuus HOM05D005720 ORTHO05D006984 5.3e-158 562.8 1001 40.3
MBI06_g04292_MAGBIO Magnolia biondii HOM05D005720 ORTHO05D006984 1.3e-156 558.1 1032 38.7
PSO384G4812 Papaver somniferum HOM05D005720 ORTHO05D006984 2.9e-156 557.0 1004 38.4
Actinidia08611 Actinidia chinensis HOM05D005720 ORTHO05D006984 4.9e-156 556.2 877 41.2
Thhalv10012590m.g Eutrema salsugineum HOM05D005720 ORTHO05D006984 1.2e-154 551.6 1005 38.4
Eucgr.K00315 Eucalyptus grandis HOM05D005720 ORTHO05D006984 2.3e-153 547.4 1028 38.3
Cc02_g02050 Coffea canephora HOM05D005720 ORTHO05D006984 5.1e-153 546.2 1003 39.3
Lsat_1_v5_gn_1_45000 Lactuca sativa HOM05D005720 ORTHO05D006984 4.8e-151 539.7 952 40.1
THA.LOC104825125 Tarenaya hassleriana HOM05D005720 ORTHO05D006984 4.5e-149 533.1 1002 37.6
HanXRQChr11g0353671 Helianthus annuus HOM05D005720 ORTHO05D006984 1.7e-148 531.2 997 38.8
Aa31LG3G9180 Aethionema arabicum HOM05D005720 ORTHO05D006984 1.1e-147 528.5 1003 37.8
AL8G27450 Arabidopsis lyrata HOM05D005720 ORTHO05D006984 2.4e-147 527.3 1004 37.2
TAR636G3648 Trochodendron aralioides HOM05D005720 ORTHO05D006984 3.2e-147 526.9 785 43.4
ECA248G2416 Erigeron canadensis HOM05D005720 ORTHO05D006984 9.3e-147 525.4 998 40.2
Nitab4.5_0000472g0110 Nicotiana tabacum HOM05D005720 ORTHO05D006984 2.1e-146 524.2 1014 37.9
CARHR265920 Cardamine hirsuta HOM05D005720 ORTHO05D006984 4.3e-144 516.5 992 36.6
Peaxi162Scf00904g00464 Petunia axillaris HOM05D005720 ORTHO05D006984 2.1e-143 514.2 1003 38.1
Solyc03g007550.4 Solanum lycopersicum HOM05D005720 ORTHO05D006984 2.1e-143 514.2 989 38.3
AT5G52950 Arabidopsis thaliana HOM05D005720 ORTHO05D006984 8.1e-143 512.3 1013 36.9
Sopen03g003510 Solanum pennellii HOM05D005720 ORTHO05D006984 9.0e-142 508.8 989 38.1
A02p11480 Brassica napus HOM05D005720 ORTHO05D006984 1.5e-141 508.1 1007 36.5
C09p42670 Brassica napus HOM05D005720 ORTHO05D006984 2.0e-141 507.7 993 37.0
BolC9t57143H Brassica oleracea HOM05D005720 ORTHO05D006984 2.0e-141 507.7 993 37.0
BraA02t06213Z Brassica rapa HOM05D005720 ORTHO05D006984 2.9e-140 503.8 1000 36.7
AUR62021063 Chenopodium quinoa HOM05D005720 ORTHO05D006984 1.4e-139 501.5 1009 37.6
Carub.0008s1313 Capsella rubella HOM05D005720 ORTHO05D006984 2.5e-139 500.7 1010 36.7
CAN.G108.10 Capsicum annuum HOM05D005720 ORTHO05D006984 2.1e-138 497.7 999 36.9
Sp6g15110 Schrenkiella parvula HOM05D005720 ORTHO05D006984 7.9e-138 495.7 1015 36.9
DCAR_010640 Daucus carota HOM05D005720 ORTHO05D006984 1.3e-137 495.0 995 37.4
BolC2t08045H Brassica oleracea HOM05D005720 ORTHO05D006984 2.3e-137 494.2 1003 36.0
C02p19150 Brassica napus HOM05D005720 ORTHO05D006984 5.1e-137 493.0 1003 36.0
ClCG07G011830 Citrullus lanatus HOM05D005720 ORTHO05D006984 6.7e-137 492.7 1020 36.3
SalBow4G2744 Salvia bowleyana HOM05D005720 ORTHO05D006984 1.5e-136 491.5 999 37.1
SalBow4G2908 Salvia bowleyana HOM05D005720 ORTHO05D006984 1.5e-136 491.5 998 37.2
TAR629G0723 Trochodendron aralioides HOM05D005720 ORTHO05D006984 3.3e-136 490.3 769 41.4
BcaC03g14481 Brassica carinata HOM05D005720 ORTHO05D006984 2.1e-135 487.6 1012 36.2
MSTRG.27056 Avicennia marina HOM05D005720 ORTHO05D006984 2.2e-132 477.6 1025 36.4
SHI10811 Sapria himalayana HOM05D005720 ORTHO05D006984 1.3e-129 468.4 898 36.6
Migut.F00255 Erythranthe guttata HOM05D005720 ORTHO05D006984 7.4e-128 462.6 979 35.0
PGR142G3228 Punica granatum HOM05D005720 ORTHO05D006984 1.1e-115 422.2 999 34.5
Nitab4.5_0001331g0120 Nicotiana tabacum HOM05D005720 ORTHO05D006984 3.0e-113 414.1 993 34.2
SGA_v2.0_scaffold192G40596 Striga asiatica HOM05D005720 ORTHO05D006984 2.6e-104 384.4 943 32.3
Hma1.2p1_1891F.1_g306670 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 8.5e-100 369.4 918 32.4
unitig_747.g21855 Utricularia gibba HOM05D000121 ORTHO05D000102 1.1e-99 369.0 1048 31.1
HPP92_005221 Vanilla planifolia HOM05D005720 ORTHO05D006984 3.2e-99 367.5 962 32.7
ATR1131G019 Amborella trichopoda HOM05D005720 ORTHO05D006984 1.2e-90 339.0 1022 31.1
Lj3A914T79 Lonicera japonica HOM05D005720 ORTHO05D006984 4.9e-87 327.0 594 39.9
CDE02G2607 Ceratophyllum demersum HOM05D005720 ORTHO05D006984 3.1e-86 324.3 883 31.3
vmacro06588 Vaccinium macrocarpon HOM05D005720 ORTHO05D006984 1.3e-84 318.9 633 35.4
CSS0019438 Camellia sinensis var. sinensis HOM05D005720 ORTHO05D006984 9.5e-83 312.8 458 45.9
Zm00001eb119640 Zea mays HOM05D005720 ORTHO05D006984 8.9e-81 306.2 1015 29.1
Hma1.2p1_0142F.1_g064120 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 3.7e-79 300.8 470 40.6
BcaB08g35658 Brassica carinata HOM05D005720 ORTHO05D006984 2.4e-78 298.1 615 35.6
CSS0038820 Camellia sinensis var. sinensis HOM05D005720 ORTHO05D006984 3.1e-73 281.2 458 43.4
Sed0011275 Sechium edule HOM05D005720 ORTHO05D006984 4.4e-72 277.3 394 44.7
SEGI_30168 Sequoiadendron giganteum HOM05D005720 ORTHO05D006984 3.2e-70 271.2 1079 27.9
Hma1.2p1_0142F.1_g064140 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 4.0e-65 254.2 430 42.1
HPP92_005214 Vanilla planifolia HOM05D005720 ORTHO05D006984 1.4e-62 245.7 942 28.0
BcaB05g21993 Brassica carinata HOM05D005720 ORTHO05D006984 1.9e-62 245.4 985 27.3
Lj3P914T60 Lonicera japonica HOM05D005720 ORTHO05D006984 3.5e-53 214.5 320 41.6
TAR629G3278 Trochodendron aralioides HOM05D005720 ORTHO05D006984 6.4e-47 193.7 251 49.0
PGSC0003DMG400006595 Solanum tuberosum HOM05D005720 ORTHO05D006984 1.2e-40 172.9 249 46.2
BraA10t43127Z Brassica rapa HOM05D005720 ORTHO05D006984 7.6e-40 170.2 303 37.3
vmacro06589 Vaccinium macrocarpon HOM05D005720 ORTHO05D006984 1.3e-34 152.9 302 39.1
MBI16_g03131_MAGBIO Magnolia biondii HOM05D005720 ORTHO05D006984 6.4e-31 140.6 481 31.2
Os01g0222300 Oryza sativa ssp. japonica HOM05D005720 ORTHO05D006984 1.1e-30 139.8 371 31.0
SEGI_32546 Sequoiadendron giganteum HOM05D005720 ORTHO05D006984 2.4e-25 122.1 1079 23.1
SHI10812 Sapria himalayana HOM05D005720 ORTHO05D006984 1.1e-17 96.7 156 42.9
Mapoly0039s0001 Marchantia polymorpha HOM05D005720 ORTHO05D006984 4.2e-14 84.7 149 35.6
Pp3c15_13500 Physcomitrium patens HOM05D005720 ORTHO05D006984 1.3e-12 79.7 126 37.3
MBI16_g03132_MAGBIO Magnolia biondii HOM05D005720 ORTHO05D006984 5.1e-12 77.8 164 34.1
RcHm_v2.0_Chr1g0379741 Rosa chinensis HOM05D005720 ORTHO05D006984 5.1e-12 77.8 74 59.5
Lju188P3T29 Lonicera japonica HOM05D005720 ORTHO05D006984 2.4e-09 68.9 101 49.5


User provided reference genes

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