Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_27853_v3 Cicer arietinum L. HOM05D006442 ORTHO05D007980 2.5e-135 485.3 227 100.0
Glyma.15G271700 Glycine max HOM05D006442 ORTHO05D007980 4.1e-53 212.2 227 50.7
TPR.G12183 Trifolium pratense HOM05D006442 ORTHO05D007980 9.1e-53 211.1 227 51.5
QL04p004786 Quercus lobata HOM05D006442 ORTHO05D007980 5.9e-52 208.4 226 50.0
Medtr3g027090 Medicago truncatula HOM05D006442 ORTHO05D007980 2.2e-51 206.5 227 50.7
VMungo1080G0583 Vigna mungo HOM05D006442 ORTHO05D007980 3.8e-51 205.7 227 49.3
Glyma.08G151500 Glycine max HOM05D006442 ORTHO05D007980 5.0e-51 205.3 227 49.8
Phvul.005G037200 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 1.4e-50 203.8 227 48.9
Lj3g0007274 Lotus japonicus HOM05D006442 ORTHO05D007980 7.2e-50 201.4 227 48.0
VMungo1080G0430 Vigna mungo HOM05D006442 ORTHO05D007980 1.0e-48 197.6 223 47.1
arahy.Tifrunner.gnm1.ann1.9R1925 Arachis hypogaea HOM05D006442 ORTHO05D007980 1.4e-48 197.2 227 47.6
arahy.Tifrunner.gnm1.ann1.A55RA3 Arachis hypogaea HOM05D006442 ORTHO05D007980 1.4e-48 197.2 227 47.6
MD07G1004900 Malus domestica HOM05D006442 ORTHO05D007980 1.8e-48 196.8 224 46.9
Psat5g207000 Pisum sativum HOM05D006442 ORTHO05D007980 2.3e-48 196.4 227 48.5
Prupe.2G007200 Prunus persica HOM05D006442 ORTHO05D007980 2.3e-48 196.4 224 47.3
CiPaw.12G060500 Carya illinoinensis HOM05D006442 ORTHO05D007980 3.9e-48 195.7 223 47.1
Haze_03245 Corylus avellana HOM05D006442 ORTHO05D007980 8.8e-48 194.5 224 46.4
GSVIVG01032037001 Vitis vinifera HOM05D006442 ORTHO05D007980 8.8e-48 194.5 227 46.7
Cfa010728 Carpinus fangiana HOM05D006442 ORTHO05D007980 1.5e-47 193.7 224 45.5
Manes.10G148300 Manihot esculenta HOM05D006442 ORTHO05D007980 2.6e-47 193.0 227 46.3
Dinv43911 Davidia involucrata HOM05D006442 ORTHO05D007980 4.4e-47 192.2 227 45.4
Eucgr.G03402 Eucalyptus grandis HOM05D006442 ORTHO05D007980 5.7e-47 191.8 227 46.3
Hma1.2p1_0010F.1_g007050 Hydrangea macrophylla HOM05D006442 ORTHO05D007980 7.4e-47 191.4 224 46.4
CSS0016496 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 1.3e-46 190.7 227 46.3
Actinidia20688 Actinidia chinensis HOM05D006442 ORTHO05D007980 3.7e-46 189.1 223 45.3
CSS0031684 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 4.8e-46 188.7 227 45.8
Actinidia21568 Actinidia chinensis HOM05D006442 ORTHO05D007980 1.8e-45 186.8 223 44.8
Lsat_1_v5_gn_8_7620 Lactuca sativa HOM05D006442 ORTHO05D007980 1.8e-45 186.8 227 44.5
Peaxi162Scf00045g00327 Petunia axillaris HOM05D006442 ORTHO05D007980 3.1e-45 186.0 223 45.3
Phvul.005G038700 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 3.1e-45 186.0 223 45.7
PGSC0003DMG400026375 Solanum tuberosum HOM05D006442 ORTHO05D007980 3.1e-45 186.0 227 45.4
Rhsim07G0053100 Rhododendron simsii HOM05D006442 ORTHO05D007980 4.1e-45 185.7 227 44.5
PGR042G3140 Punica granatum HOM05D006442 ORTHO05D007980 5.3e-45 185.3 227 43.6
Cc02_g27340 Coffea canephora HOM05D006442 ORTHO05D007980 7.0e-45 184.9 224 45.1
Cc02_g27370 Coffea canephora HOM05D006442 ORTHO05D007980 7.0e-45 184.9 224 45.1
FvH4_7g00510 Fragaria vesca HOM05D006442 ORTHO05D007980 7.0e-45 184.9 224 43.8
FAN06G2479 Fragaria x ananassa HOM05D006442 ORTHO05D007980 7.0e-45 184.9 224 43.8
FAN10G1890 Fragaria x ananassa HOM05D006442 ORTHO05D007980 7.0e-45 184.9 224 43.8
TWI09G1159 Tripterygium wilfordii HOM05D006442 ORTHO05D007980 9.1e-45 184.5 224 43.8
FAN03G1462 Fragaria x ananassa HOM05D006442 ORTHO05D007980 1.5e-44 183.7 224 43.3
SalBow5G2051 Salvia bowleyana HOM05D006442 ORTHO05D007980 1.5e-44 183.7 225 43.6
Atru.chr11.2670 Acer truncatum HOM05D006442 ORTHO05D007980 2.0e-44 183.3 224 44.6
Oeu064276.1 Olea europaea HOM05D006442 ORTHO05D007980 2.0e-44 183.3 227 43.6
CAN.G1110.8 Capsicum annuum HOM05D006442 ORTHO05D007980 2.6e-44 183.0 223 44.8
RcHm_v2.0_Chr1g0314301 Rosa chinensis HOM05D006442 ORTHO05D007980 2.6e-44 183.0 224 43.3
Lalb_Chr25g0283271 Lupinus albus HOM05D006442 ORTHO05D007980 3.5e-44 182.6 227 44.9
TAR633G2790 Trochodendron aralioides HOM05D006442 ORTHO05D007980 3.5e-44 182.6 227 43.6
Solyc10g037980.2 Solanum lycopersicum HOM05D006442 ORTHO05D007980 4.5e-44 182.2 223 45.3
Sed0019847 Sechium edule HOM05D006442 ORTHO05D007980 7.7e-44 181.4 225 44.4
Aqoxy1G00188 Aquilegia oxysepala HOM05D006442 ORTHO05D007980 1.0e-43 181.0 227 44.5
Nitab4.5_0002012g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 2.2e-43 179.9 223 43.9
Sc14g0005190 Simmondsia chinensis HOM05D006442 ORTHO05D007980 3.8e-43 179.1 225 42.2
HanXRQChr01g0018511 Helianthus annuus HOM05D006442 ORTHO05D007980 5.0e-43 178.7 227 43.6
Sopen10g011600 Solanum pennellii HOM05D006442 ORTHO05D007980 5.0e-43 178.7 223 44.8
Ciclev10033058m.g Citrus clementina HOM05D006442 ORTHO05D007980 8.5e-43 177.9 224 43.3
Duzib133G0004 Durio zibethinus HOM05D006442 ORTHO05D007980 2.5e-42 176.4 229 42.4
CANSAT01G1452 Cannabis sativa HOM05D006442 ORTHO05D007980 3.2e-42 176.0 224 44.2
Sabra16G0134100 Salix brachista HOM05D006442 ORTHO05D007980 7.2e-42 174.9 224 42.9
Potri.001G225500 Populus trichocarpa HOM05D006442 ORTHO05D007980 9.4e-42 174.5 224 42.4
ECA248G1263 Erigeron canadensis HOM05D006442 ORTHO05D007980 1.2e-41 174.1 227 41.9
MSTRG.28085 Avicennia marina HOM05D006442 ORTHO05D007980 2.7e-41 172.9 224 41.1
DCAR_006304 Daucus carota HOM05D006442 ORTHO05D007980 2.7e-41 172.9 224 43.8
Migut.N01489 Erythranthe guttata HOM05D006442 ORTHO05D007980 3.6e-41 172.6 224 42.0
Oeu013593.2 Olea europaea HOM05D006442 ORTHO05D007980 6.1e-41 171.8 227 42.3
Nn7g36056 Nelumbo nucifera HOM05D006442 ORTHO05D007980 1.8e-40 170.2 227 40.5
Ah.16g101020 Amaranthus hybridus HOM05D006442 ORTHO05D007980 4.0e-40 169.1 225 41.3
Nn2g15582 Nelumbo nucifera HOM05D006442 ORTHO05D007980 8.8e-40 167.9 221 41.2
Gohir.D09G099100 Gossypium hirsutum HOM05D006442 ORTHO05D007980 1.1e-39 167.5 229 41.0
Gorai.006G116100 Gossypium raimondii HOM05D006442 ORTHO05D007980 1.1e-39 167.5 229 41.0
CAN.G1076.12 Capsicum annuum HOM05D006442 ORTHO05D007980 3.3e-39 166.0 223 43.0
Gohir.A09G099700 Gossypium hirsutum HOM05D006442 ORTHO05D007980 3.3e-39 166.0 229 40.2
CDE07G0477 Ceratophyllum demersum HOM05D006442 ORTHO05D007980 4.4e-39 165.6 225 39.1
AUR62009476 Chenopodium quinoa HOM05D006442 ORTHO05D007980 4.4e-39 165.6 223 40.8
AUR62023154 Chenopodium quinoa HOM05D006442 ORTHO05D007980 5.7e-39 165.2 223 40.4
Thecc.01G414800 Theobroma cacao HOM05D006442 ORTHO05D007980 7.5e-39 164.9 226 40.7
COL.COLO4_23906 Corchorus olitorius HOM05D006442 ORTHO05D007980 1.7e-38 163.7 231 40.7
Glyma.08G152300 Glycine max HOM05D006442 ORTHO05D007980 2.2e-38 163.3 97 76.3
SGA_v2.0_scaffold4G02243 Striga asiatica HOM05D006442 ORTHO05D007980 3.7e-38 162.5 224 41.1
EL10Ac2g04436 Beta vulgaris HOM05D006442 ORTHO05D007980 3.1e-37 159.5 225 39.6
PSO384G2221 Papaver somniferum HOM05D006442 ORTHO05D007980 1.2e-36 157.5 224 39.7
SGA_v2.0_scaffold10G05439 Striga asiatica HOM05D006442 ORTHO05D007980 1.2e-36 157.5 224 38.8
MBI01_g15755_MAGBIO Magnolia biondii HOM05D006442 ORTHO05D007980 2.0e-36 156.8 96 74.0
PSO339G0425 Papaver somniferum HOM05D006442 ORTHO05D007980 2.6e-36 156.4 224 39.3
CsaV3_3G032370 Cucumis sativus L. HOM05D006442 ORTHO05D007980 1.7e-35 153.7 85 81.2
AUR62009477 Chenopodium quinoa HOM05D006442 ORTHO05D007980 1.1e-34 151.0 225 36.9
unitig_22.g5766 Utricularia gibba HOM05D006442 ORTHO05D007980 1.5e-34 150.6 225 38.7
BcaC06g31744 Brassica carinata HOM05D006442 ORTHO05D007980 1.9e-34 150.2 225 38.2
AUR62023155 Chenopodium quinoa HOM05D006442 ORTHO05D007980 1.9e-34 150.2 225 36.9
THA.LOC104823024 Tarenaya hassleriana HOM05D006442 ORTHO05D007980 1.9e-34 150.2 224 37.9
BcaC02g10802 Brassica carinata HOM05D006442 ORTHO05D007980 4.2e-34 149.1 225 37.3
A06p48230 Brassica napus HOM05D006442 ORTHO05D007980 4.2e-34 149.1 225 37.3
C04p24990 Brassica napus HOM05D006442 ORTHO05D007980 4.2e-34 149.1 225 37.3
BolC4t23999H Brassica oleracea HOM05D006442 ORTHO05D007980 4.2e-34 149.1 225 37.3
BraA06t27691Z Brassica rapa HOM05D006442 ORTHO05D007980 4.2e-34 149.1 225 37.3
vmacro13638 Vaccinium macrocarpon HOM05D006442 ORTHO05D007980 4.7e-33 145.6 84 76.2
AL8G18110 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 1.4e-32 144.1 225 37.3
Thhalv10003289m.g Eutrema salsugineum HOM05D006442 ORTHO05D007980 1.4e-32 144.1 225 36.9
Sp2g07550 Schrenkiella parvula HOM05D006442 ORTHO05D007980 2.3e-32 143.3 224 37.1
Atru.chr11.2672 Acer truncatum HOM05D006442 ORTHO05D007980 1.2e-31 141.0 85 74.1
CARHR181310 Cardamine hirsuta HOM05D006442 ORTHO05D007980 4.4e-31 139.0 225 35.6
Carub.0008s0607 Capsella rubella HOM05D006442 ORTHO05D007980 7.5e-31 138.3 225 35.6
AT5G42850 Arabidopsis thaliana HOM05D006442 ORTHO05D007980 1.3e-30 137.5 225 35.6
Nitab4.5_0004606g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 4.8e-30 135.6 84 70.2
ATR0605G011 Amborella trichopoda HOM05D006442 ORTHO05D007980 1.6e-28 130.6 223 32.7
SEGI_10267 Sequoiadendron giganteum HOM05D006442 ORTHO05D007980 1.7e-27 127.1 81 66.7
HPP92_018950 Vanilla planifolia HOM05D006442 ORTHO05D007980 2.2e-27 126.7 225 35.1
Aa31LG8G5740 Aethionema arabicum HOM05D000097 ORTHO05D000041 9.4e-26 121.3 82 63.4
SMO244G0064 Selaginella moellendorffii HOM05D006442 ORTHO05D007980 1.2e-25 120.9 81 60.5
MD02G1317000 Malus domestica HOM05D006442 ORTHO05D007980 2.7e-25 119.8 64 79.7
ClCG10G012580 Citrullus lanatus HOM05D002156 ORTHO05D002328 3.6e-25 119.4 75 70.7
Mapoly0028s0130 Marchantia polymorpha HOM05D006442 ORTHO05D007980 4.0e-24 115.9 82 61.0
Os06g0320000 Oryza sativa ssp. japonica HOM05D006442 ORTHO05D007980 5.2e-24 115.5 85 57.6
AagrBONN_evm.TU.Sc2ySwM_117.1593 Anthoceros agrestis HOM05D006442 ORTHO05D007980 6.8e-24 115.2 81 60.5
Pp3c1_3150 Physcomitrium patens HOM05D006442 ORTHO05D007980 2.0e-23 113.6 81 61.7
Zm00001eb381670 Zea mays HOM05D006442 ORTHO05D007980 9.8e-23 111.3 82 59.8
CAN.G37.7 Capsicum annuum HOM05D006442 ORTHO05D007980 5.9e-20 102.1 196 32.7
CAN.G290.22 Capsicum annuum HOM05D006442 ORTHO05D007980 1.8e-16 90.5 54 66.7
Aa31LG8G5750 Aethionema arabicum HOM05D006442 ORTHO05D007980 2.2e-14 83.6 64 54.7
CBR_g40140 Chara braunii HOM05D006442 ORTHO05D007980 1.4e-13 80.9 70 52.9
CsaV3_3G032380 Cucumis sativus L. HOM05D002156 ORTHO05D002328 1.4e-13 80.9 48 77.1
MELO3C023952.2 Cucumis melo HOM05D002156 ORTHO05D002328 3.2e-13 79.7 48 75.0
MD01G1062200 Malus domestica HOM05D006442 ORTHO05D007980 3.9e-11 72.8 48 70.8
Cre07.g315100 Chlamydomonas reinhardtii HOM05D006442 ORTHO05D007980 4.4e-07 59.3 85 38.8


User provided reference genes

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