Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_27814_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 6.2e-70 267.3 131 100.0
Ca_28355_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.1e-61 238.4 156 79.5
Ca_31004_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 6.4e-59 230.7 156 76.9
Ca_24701_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.7e-49 198.7 232 51.3
Ca_05610_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 6.0e-49 197.6 231 49.8
Ca_05449_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.9e-48 194.9 255 47.5
Ca_06734_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 6.2e-46 187.6 272 44.5
Ca_10824_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 7.6e-44 180.6 287 41.5
Ca_22722_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.3e-43 179.9 211 51.2
Ca_31303_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.9e-43 177.9 130 73.1
Ca_00812_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 6.4e-43 177.6 282 41.8
Ca_14154_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.9e-42 176.0 317 38.8
Ca_07612_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.2e-41 173.3 310 38.7
Ca_18448_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.1e-41 172.6 282 41.5
Ca_04708_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.0e-40 168.7 109 79.8
Ca_05845_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 8.7e-40 167.2 324 37.0
Ca_15063_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 8.7e-40 167.2 84 95.2
Ca_05498_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.1e-39 166.8 193 52.3
Ca_01733_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.5e-39 166.4 88 89.8
Ca_19210_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.9e-39 166.0 344 36.0
Ca_02045_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.5e-39 165.6 108 79.6
Ca_24790_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.6e-39 164.5 84 92.9
Ca_11467_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 7.3e-39 164.1 84 92.9
Ca_05343_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 9.6e-39 163.7 84 91.7
Ca_07744_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 9.6e-39 163.7 84 95.2
Ca_14103_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.6e-38 162.9 84 92.9
Ca_06584_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.8e-38 162.2 84 91.7
Ca_14987_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.8e-38 162.2 84 92.9
Ca_17397_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.8e-38 162.2 84 91.7
Ca_13896_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.8e-38 161.4 84 92.9
Ca_18240_v3 Cicer arietinum L. HOM05D000747 ORTHO05D001683 6.2e-38 161.0 344 35.5
Ca_19547_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 6.2e-38 161.0 84 92.9
Ca_18461_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.8e-37 159.5 84 91.7
Ca_01970_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.4e-37 159.1 84 91.7
Ca_08512_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.4e-37 159.1 84 91.7
Ca_01972_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.1e-37 158.7 84 92.9
Ca_19015_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.1e-37 158.7 178 53.4
Ca_26127_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 6.9e-37 157.5 84 90.5
Ca_26430_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 9.0e-37 157.1 84 90.5
Ca_06737_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.5e-36 156.4 84 90.5
Ca_06583_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.6e-36 155.6 88 85.2
Ca_06614_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.4e-36 155.2 79 92.4
Ca_03632_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 8.7e-32 140.6 108 67.6
Ca_25778_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.4e-28 128.6 84 77.4
Ca_23749_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.9e-27 124.8 276 34.8
Ca_28147_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.9e-26 122.9 286 33.9
Ca_19513_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.6e-25 119.8 222 38.3
Ca_17123_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.3e-24 115.9 58 96.6
Ca_05915_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.1e-24 114.8 58 94.8
Ca_16163_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 8.7e-24 114.0 313 31.6
Ca_05908_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.5e-23 112.5 58 93.1
Ca_12101_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.5e-23 112.5 58 93.1
Ca_17143_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.3e-23 112.1 58 93.1
Ca_18229_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.6e-22 109.8 318 30.2
Ca_23760_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.3e-19 100.1 47 97.9
Ca_15813_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 6.5e-19 97.8 81 56.8
Ca_14263_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.5e-18 95.9 81 56.8
Ca_10933_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.2e-18 95.5 81 55.6
Ca_04826_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 9.3e-18 94.0 81 54.3
Ca_11022_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.7e-17 92.4 279 29.4
Ca_07516_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 6.0e-17 91.3 54 81.5
Ca_20320_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.3e-16 90.1 79 51.9
Ca_27772_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.1e-16 88.2 78 60.3
Ca_24365_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 8.7e-16 87.4 84 45.2
Ca_16177_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.1e-15 87.0 84 45.2
Ca_28485_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 7.4e-15 84.3 48 85.4
TPR.G28050 Trifolium pratense HOM05D000045 ORTHO05D000001 1.3e-14 83.6 74 54.1
Ca_17524_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.1e-13 80.5 84 41.7
Medtr7g062210 Medicago truncatula HOM05D000002 ORTHO05D000001 4.1e-13 78.6 73 46.6
Ca_28064_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.6e-12 75.9 80 45.0
Ca_14454_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.4e-12 75.5 80 42.5
Ca_21025_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.5e-12 75.1 88 43.2
Ca_26898_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.3e-11 73.6 74 50.0
VMungo0720G0379 Vigna mungo HOM05D003429 ORTHO05D003873 1.3e-11 73.6 63 52.4
Ca_05357_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.8e-11 72.0 99 43.4
Ca_27230_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.8e-11 72.0 80 46.2
Ca_26745_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 6.5e-11 71.2 72 45.8
Medtr7g022910 Medicago truncatula HOM05D000002 ORTHO05D048922 2.5e-10 69.3 72 47.2
TWI18G0957 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 2.5e-10 69.3 104 38.5
Ca_06059_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.2e-10 68.6 84 41.7
Lalb_Chr11g0071471 Lupinus albus HOM05D000002 ORTHO05D000001 9.3e-10 67.4 62 48.4
Medtr8g071020 Medicago truncatula HOM05D000002 ORTHO05D000001 1.6e-09 66.6 57 50.9
Atru.chr6.330 Acer truncatum HOM05D000002 ORTHO05D000001 2.7e-09 65.9 90 37.8
Ca_11114_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.5e-09 65.5 89 34.8
TWI31G1144 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 4.6e-09 65.1 90 38.9
CANSAT21G0923 Cannabis sativa HOM05D000002 ORTHO05D000001 7.9e-09 64.3 82 40.2
MD02G1295200 Malus domestica HOM05D000002 ORTHO05D000001 7.9e-09 64.3 79 38.0
SHI05086 Sapria himalayana HOM05D000002 ORTHO05D000001 7.9e-09 64.3 84 40.5
Ca_11925_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.0e-08 63.9 64 43.8
Ca_26163_v3 Cicer arietinum L. HOM05D000002 ORTHO05D028848 1.0e-08 63.9 65 49.2
SHI19884 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-08 63.9 93 40.9
Ca_12074_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.3e-08 63.5 87 39.1
Ca_15812_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.3e-08 63.5 58 53.4
Medtr5g077420 Medicago truncatula HOM05D000002 ORTHO05D030145 1.3e-08 63.5 90 38.9
Medtr8g466040 Medicago truncatula HOM05D000002 ORTHO05D030145 1.3e-08 63.5 58 53.4
SHI31472 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-08 63.5 86 39.5
Ca_26800_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.8e-08 63.2 32 90.6
Medtr6g018260 Medicago truncatula HOM05D000002 ORTHO05D000001 2.3e-08 62.8 52 53.8
SHI18478 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-08 62.8 84 39.3
Sed0007235 Sechium edule HOM05D000002 ORTHO05D000001 2.3e-08 62.8 83 37.3
Ah.04g160170 Amaranthus hybridus HOM05D000002 ORTHO05D000001 3.0e-08 62.4 105 36.2
AT1G48720 Arabidopsis thaliana HOM05D000002 ORTHO05D000001 3.0e-08 62.4 93 32.3
SHI29359 Sapria himalayana HOM05D000002 ORTHO05D000001 3.0e-08 62.4 89 38.2
SHI37457 Sapria himalayana HOM05D000002 ORTHO05D000001 3.0e-08 62.4 84 38.1
CSS0002172 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.9e-08 62.0 91 35.2
Prupe.1G219500 Prunus persica HOM05D000002 ORTHO05D000001 3.9e-08 62.0 83 42.2
SHI14662 Sapria himalayana HOM05D000002 ORTHO05D000001 3.9e-08 62.0 88 38.6
SHI45229 Sapria himalayana HOM05D000002 ORTHO05D000001 3.9e-08 62.0 91 36.3
Ca_13725_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.1e-08 61.6 58 58.6
SHI02929 Sapria himalayana HOM05D000002 ORTHO05D000001 5.1e-08 61.6 84 39.3
SHI12969 Sapria himalayana HOM05D000002 ORTHO05D000001 5.1e-08 61.6 84 39.3
SHI17759 Sapria himalayana HOM05D000002 ORTHO05D000001 5.1e-08 61.6 84 39.3
Ca_03196_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 6.7e-08 61.2 69 49.3
Sed0023100 Sechium edule HOM05D000002 ORTHO05D000001 6.7e-08 61.2 83 36.1
Ah.16g108360 Amaranthus hybridus HOM05D000002 ORTHO05D000001 8.7e-08 60.8 73 38.4
CSS0046672 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.7e-08 60.8 84 39.3
PSO017G5132 Papaver somniferum HOM05D000002 ORTHO05D000001 1.1e-07 60.5 84 35.7
PSO210G4029 Papaver somniferum HOM05D000002 ORTHO05D000001 1.1e-07 60.5 84 35.7
SHI02822 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-07 60.5 84 36.9
SHI09392 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-07 60.1 88 36.4
SHI21150 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-07 60.1 79 39.2
SHI26299 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-07 60.1 92 38.0
SHI55107 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-07 60.1 84 39.3
Sed0018924 Sechium edule HOM05D000002 ORTHO05D000001 1.5e-07 60.1 83 37.3
Sed0022174 Sechium edule HOM05D000002 ORTHO05D000001 1.5e-07 60.1 83 37.3
TPR.G8649 Trifolium pratense HOM05D000002 ORTHO05D000001 1.5e-07 60.1 90 32.2
Ah.10g026310 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.9e-07 59.7 104 32.7
Ca_01928_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.9e-07 59.7 30 90.0
Ca_02573_v3 Cicer arietinum L. HOM05D002502 ORTHO05D000001 1.9e-07 59.7 79 41.8
PSO063G4430 Papaver somniferum HOM05D000002 ORTHO05D000001 1.9e-07 59.7 78 33.3
SHI11283 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-07 59.7 84 38.1
SHI18860 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-07 59.7 86 38.4
SHI23530 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-07 59.7 89 36.0
Sed0005115 Sechium edule HOM05D000002 ORTHO05D000001 1.9e-07 59.7 83 37.3
Ca_11757_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.5e-07 59.3 94 34.0
SHI00045 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-07 59.3 89 38.2
SHI03433 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-07 59.3 80 37.5
CSS0035821 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.3e-07 58.9 83 37.3
HanXRQChr06g0174011 Helianthus annuus HOM05D000002 ORTHO05D000001 3.3e-07 58.9 82 36.6
AUR62035841 Chenopodium quinoa HOM05D000002 ORTHO05D000001 4.3e-07 58.5 73 41.1
Ca_28391_v3 Cicer arietinum L. HOM05D000002 ORTHO05D018988 4.3e-07 58.5 79 46.8
SHI03313 Sapria himalayana HOM05D000002 ORTHO05D000001 4.3e-07 58.5 84 38.1
SHI33540 Sapria himalayana HOM05D000002 ORTHO05D000001 4.3e-07 58.5 78 41.0
HanXRQChr10g0310951 Helianthus annuus HOM05D000002 ORTHO05D000001 5.7e-07 58.2 92 35.9
Medtr7g028735 Medicago truncatula HOM05D049151 ORTHO05D048922 5.7e-07 58.2 56 55.4
SHI10555 Sapria himalayana HOM05D000002 ORTHO05D000001 5.7e-07 58.2 88 36.4
SHI01787 Sapria himalayana HOM05D000002 ORTHO05D000001 7.4e-07 57.8 84 40.5
AUR62016370 Chenopodium quinoa HOM05D000002 ORTHO05D000001 9.7e-07 57.4 73 41.1
Ca_26457_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 9.7e-07 57.4 65 40.0
Ca_30448_v3 Cicer arietinum L. HOM05D000002 ORTHO05D018988 9.7e-07 57.4 30 86.7
SHI18342 Sapria himalayana HOM05D000002 ORTHO05D000001 9.7e-07 57.4 90 38.9
SHI25860 Sapria himalayana HOM05D000002 ORTHO05D000001 9.7e-07 57.4 83 38.6
HanXRQChr11g0342821 Helianthus annuus HOM05D000002 ORTHO05D000001 1.3e-06 57.0 90 36.7
SHI12476 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-06 57.0 84 36.9
MSTRG.1023 Avicennia marina HOM05D000002 ORTHO05D000001 1.6e-06 56.6 86 40.7
PSO781G0062 Papaver somniferum HOM05D000002 ORTHO05D000001 1.6e-06 56.6 84 34.5
HanXRQChr15g0467201 Helianthus annuus HOM05D000002 ORTHO05D000001 2.2e-06 56.2 90 33.3
Hma1.2p1_0784F.1_g217250 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.8e-06 55.8 89 34.8
CSS0020427 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.7e-06 55.5 74 39.2
VMungo1080G0438 Vigna mungo HOM05D000002 ORTHO05D000001 3.7e-06 55.5 86 38.4
EL10Ac1g01399 Beta vulgaris HOM05D000002 ORTHO05D000001 4.8e-06 55.1 88 37.5
AUR62027937 Chenopodium quinoa HOM05D000002 ORTHO05D000001 4.8e-06 55.1 71 40.8
Ca_02575_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.8e-06 55.1 70 42.9
CSS0030598 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.3e-06 54.7 93 33.3
Ca_02333_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 6.3e-06 54.7 70 45.7
Hma1.2p1_0117F.1_g056310 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.3e-06 54.7 74 39.2
SHI28427 Sapria himalayana HOM05D000002 ORTHO05D000001 6.3e-06 54.7 88 34.1
SHI37535 Sapria himalayana HOM05D000002 ORTHO05D000001 6.3e-06 54.7 89 33.7
CSS0016795 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.2e-06 54.3 83 37.3
PSO566G0222 Papaver somniferum HOM05D000002 ORTHO05D000001 8.2e-06 54.3 75 33.3


User provided reference genes

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