Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_27800_v3 Cicer arietinum L. HOM05D004646 ORTHO05D005829 7.3e-43 176.8 88 100.0
Lalb_Chr05g0220381 Lupinus albus HOM05D004646 ORTHO05D005829 1.9e-35 152.1 80 93.8
Psat4g134400 Pisum sativum HOM05D004646 ORTHO05D005829 1.6e-34 149.1 78 96.2
Lj4g0000065 Lotus japonicus HOM05D004646 ORTHO05D005829 2.1e-34 148.7 78 93.6
CiPaw.05G135800 Carya illinoinensis HOM05D004646 ORTHO05D005829 2.8e-34 148.3 77 94.8
arahy.Tifrunner.gnm1.ann1.9WQ92K Arachis hypogaea HOM05D004646 ORTHO05D005829 4.8e-34 147.5 78 96.2
arahy.Tifrunner.gnm1.ann1.K6CIAB Arachis hypogaea HOM05D004646 ORTHO05D005829 4.8e-34 147.5 78 96.2
Lalb_Chr09g0329301 Lupinus albus HOM05D004646 ORTHO05D005829 4.8e-34 147.5 80 91.2
FvH4_4g31430 Fragaria vesca HOM05D004646 ORTHO05D005829 1.4e-33 146.0 77 92.2
FAN07G2721 Fragaria x ananassa HOM05D004646 ORTHO05D005829 1.4e-33 146.0 77 92.2
FAN12G2979 Fragaria x ananassa HOM05D004646 ORTHO05D005829 1.4e-33 146.0 77 92.2
FAN17G1826 Fragaria x ananassa HOM05D004646 ORTHO05D005829 1.4e-33 146.0 77 92.2
FAN22G0666 Fragaria x ananassa HOM05D004646 ORTHO05D005829 1.4e-33 146.0 77 92.2
Medtr8g467540 Medicago truncatula HOM05D004646 ORTHO05D005829 1.4e-33 146.0 77 96.1
RcHm_v2.0_Chr4g0439911 Rosa chinensis HOM05D004646 ORTHO05D005829 1.4e-33 146.0 77 92.2
Sc14g0008260 Simmondsia chinensis HOM05D004646 ORTHO05D005829 1.4e-33 146.0 77 93.5
AUR62005771 Chenopodium quinoa HOM05D004646 ORTHO05D005829 1.8e-33 145.6 79 88.6
COL.COLO4_23008 Corchorus olitorius HOM05D004646 ORTHO05D005829 1.8e-33 145.6 77 94.8
Glyma.18G119400 Glycine max HOM05D004646 ORTHO05D005829 1.8e-33 145.6 77 90.9
MD13G1072600 Malus domestica HOM05D004646 ORTHO05D005829 1.8e-33 145.6 78 92.3
MD16G1073400 Malus domestica HOM05D004646 ORTHO05D005829 1.8e-33 145.6 78 92.3
Glyma.08G300800 Glycine max HOM05D004646 ORTHO05D005829 2.4e-33 145.2 77 90.9
Phvul.L004046 Phaseolus vulgaris HOM05D004646 ORTHO05D005829 2.4e-33 145.2 77 90.9
Prupe.1G273600 Prunus persica HOM05D004646 ORTHO05D005829 2.4e-33 145.2 78 94.9
VMungo1127G0944 Vigna mungo HOM05D004646 ORTHO05D005829 2.4e-33 145.2 77 90.9
Duzib251G0705 Durio zibethinus HOM05D004646 ORTHO05D005829 3.1e-33 144.8 78 91.0
QL03p063036 Quercus lobata HOM05D004646 ORTHO05D005829 3.1e-33 144.8 77 93.5
QL03p064307 Quercus lobata HOM05D004646 ORTHO05D005829 3.1e-33 144.8 77 93.5
Atru.chr11.1794 Acer truncatum HOM05D004646 ORTHO05D005829 4.0e-33 144.4 78 91.0
Gohir.D04G192100 Gossypium hirsutum HOM05D004646 ORTHO05D005829 4.0e-33 144.4 77 93.5
CANSAT64G1881 Cannabis sativa HOM05D004646 ORTHO05D005829 5.3e-33 144.1 78 89.7
Ciclev10032082m.g Citrus clementina HOM05D004646 ORTHO05D005829 5.3e-33 144.1 77 92.2
Gorai.012G187500 Gossypium raimondii HOM05D004646 ORTHO05D005829 5.3e-33 144.1 77 92.2
Phvul.011G179800 Phaseolus vulgaris HOM05D004646 ORTHO05D005829 5.3e-33 144.1 77 90.9
Cfa008987 Carpinus fangiana HOM05D004646 ORTHO05D005829 9.0e-33 143.3 77 92.2
AUR62028786 Chenopodium quinoa HOM05D004646 ORTHO05D005829 9.0e-33 143.3 78 88.5
ClCG05G024330 Citrullus lanatus HOM05D004646 ORTHO05D005829 9.0e-33 143.3 78 91.0
TPR.G8663 Trifolium pratense HOM05D004646 ORTHO05D005829 9.0e-33 143.3 77 94.8
ATR0564G518 Amborella trichopoda HOM05D004646 ORTHO05D005829 2.0e-32 142.1 77 84.4
CsaV3_5G032630 Cucumis sativus L. HOM05D004646 ORTHO05D005829 2.0e-32 142.1 77 90.9
Eucgr.B03438 Eucalyptus grandis HOM05D004646 ORTHO05D005829 2.0e-32 142.1 77 89.6
MELO3C012090.2 Cucumis melo HOM05D004646 ORTHO05D005829 2.6e-32 141.7 78 88.5
HanXRQChr12g0362151 Helianthus annuus HOM05D004646 ORTHO05D005829 2.6e-32 141.7 77 88.3
Thecc.02G347000 Theobroma cacao HOM05D004646 ORTHO05D005829 2.6e-32 141.7 77 90.9
Hma1.2p1_0795F.1_g218775 Hydrangea macrophylla HOM05D004646 ORTHO05D005829 4.5e-32 141.0 77 89.6
Nn3g17224 Nelumbo nucifera HOM05D004646 ORTHO05D005829 4.5e-32 141.0 76 90.8
Potri.008G147600 Populus trichocarpa HOM05D004646 ORTHO05D005829 4.5e-32 141.0 77 88.3
Sabra08G0112200 Salix brachista HOM05D004646 ORTHO05D005829 4.5e-32 141.0 77 88.3
Sed0009585 Sechium edule HOM05D004646 ORTHO05D005829 4.5e-32 141.0 78 88.5
PGR102G1495 Punica granatum HOM05D004646 ORTHO05D005829 5.8e-32 140.6 77 89.6
Hund25246 Selenicereus undatus HOM05D004646 ORTHO05D005829 9.9e-32 139.8 77 87.0
Gohir.A04G147800 Gossypium hirsutum HOM05D004646 ORTHO05D005829 1.3e-31 139.4 77 88.3
CDE09G0693 Ceratophyllum demersum HOM05D004646 ORTHO05D005829 1.7e-31 139.0 78 85.9
ECA233G2883 Erigeron canadensis HOM05D004646 ORTHO05D005829 1.7e-31 139.0 77 87.0
GSVIVG01019995001 Vitis vinifera HOM05D004646 ORTHO05D005829 1.7e-31 139.0 77 89.6
MSTRG.7804 Avicennia marina HOM05D004646 ORTHO05D005829 2.2e-31 138.7 77 87.0
Nitab4.5_0011071g0010 Nicotiana tabacum HOM05D004646 ORTHO05D005829 2.2e-31 138.7 78 84.6
Sp1g12620 Schrenkiella parvula HOM05D004646 ORTHO05D005829 2.2e-31 138.7 77 87.0
Aqoxy3G03371 Aquilegia oxysepala HOM05D004646 ORTHO05D005829 2.9e-31 138.3 77 87.0
SalBow2G3250 Salvia bowleyana HOM05D004646 ORTHO05D005829 2.9e-31 138.3 77 87.0
EL10Ac6g13196 Beta vulgaris HOM05D004646 ORTHO05D005829 3.8e-31 137.9 77 88.3
unitig_747.g21177 Utricularia gibba HOM05D004646 ORTHO05D005829 3.8e-31 137.9 80 85.0
Actinidia31896 Actinidia chinensis HOM05D004646 ORTHO05D005829 4.9e-31 137.5 77 87.0
AL1G26150 Arabidopsis lyrata HOM05D004646 ORTHO05D005829 4.9e-31 137.5 77 84.4
Thhalv10008130m.g Eutrema salsugineum HOM05D004646 ORTHO05D005829 4.9e-31 137.5 77 84.4
Manes.05G100900 Manihot esculenta HOM05D004646 ORTHO05D005829 4.9e-31 137.5 77 84.4
Nitab4.5_0001503g0160 Nicotiana tabacum HOM05D004646 ORTHO05D005829 4.9e-31 137.5 77 85.7
Aa31LG1G790 Aethionema arabicum HOM05D004646 ORTHO05D005829 6.4e-31 137.1 77 84.4
PGSC0003DMG400031270 Solanum tuberosum HOM05D004646 ORTHO05D005829 6.4e-31 137.1 77 84.4
CAN.G58.23 Capsicum annuum HOM05D004646 ORTHO05D005829 1.1e-30 136.3 80 82.5
AT1G14270 Arabidopsis thaliana HOM05D004646 ORTHO05D005829 1.4e-30 136.0 77 83.1
BcaC05g25320 Brassica carinata HOM05D004646 ORTHO05D005829 1.4e-30 136.0 76 85.5
C05p12020 Brassica napus HOM05D004646 ORTHO05D005829 1.4e-30 136.0 76 85.5
BolC5t29957H Brassica oleracea HOM05D004646 ORTHO05D005829 1.4e-30 136.0 76 85.5
BraA08t35124Z Brassica rapa HOM05D004646 ORTHO05D005829 1.4e-30 136.0 77 83.1
Oeu055120.1 Olea europaea HOM05D004646 ORTHO05D005829 1.9e-30 135.6 77 84.4
Peaxi162Scf00541g00118 Petunia axillaris HOM05D004646 ORTHO05D005829 1.9e-30 135.6 78 82.1
Solyc05g007500.4 Solanum lycopersicum HOM05D004646 ORTHO05D005829 1.9e-30 135.6 77 84.4
Sopen05g003380 Solanum pennellii HOM05D004646 ORTHO05D005829 1.9e-30 135.6 77 84.4
BcaC07g38729 Brassica carinata HOM05D004646 ORTHO05D005829 2.5e-30 135.2 77 83.1
BolC8t49284H Brassica oleracea HOM05D004646 ORTHO05D005829 2.5e-30 135.2 77 83.1
Carub.0001s1395 Capsella rubella HOM05D004646 ORTHO05D005829 2.5e-30 135.2 77 83.1
Cc11_g13050 Coffea canephora HOM05D004646 ORTHO05D005829 2.5e-30 135.2 77 81.8
SGA_v2.0_scaffold53G19364 Striga asiatica HOM05D004646 ORTHO05D005829 2.5e-30 135.2 80 83.8
Zm00001eb312490 Zea mays HOM05D004646 ORTHO05D005829 2.5e-30 135.2 75 85.3
A06p10240 Brassica napus HOM05D004646 ORTHO05D005829 3.2e-30 134.8 76 84.2
BraA06t24207Z Brassica rapa HOM05D004646 ORTHO05D005829 3.2e-30 134.8 76 84.2
THA.LOC104801795 Tarenaya hassleriana HOM05D004646 ORTHO05D005829 3.2e-30 134.8 77 84.4
Lsat_1_v5_gn_8_53300 Lactuca sativa HOM05D004646 ORTHO05D005829 5.5e-30 134.0 77 81.8
PSO832G2587 Papaver somniferum HOM05D004646 ORTHO05D005829 5.5e-30 134.0 77 84.4
BcaB03g13106 Brassica carinata HOM05D004646 ORTHO05D005829 7.1e-30 133.7 77 81.8
CSS0046070 Camellia sinensis var. sinensis HOM05D004646 ORTHO05D005829 9.3e-30 133.3 77 83.1
DCAR_027410 Daucus carota HOM05D004646 ORTHO05D005829 9.3e-30 133.3 78 79.5
C08p16560 Brassica napus HOM05D004646 ORTHO05D005829 1.2e-29 132.9 77 81.8
PSO063G0788 Papaver somniferum HOM05D004646 ORTHO05D005829 1.6e-29 132.5 77 84.4
Migut.L01300 Erythranthe guttata HOM05D004646 ORTHO05D005829 6.0e-29 130.6 78 78.2
Zm00001eb041360 Zea mays HOM05D004646 ORTHO05D005829 8.7e-28 126.7 76 78.9
vmacro01257 Vaccinium macrocarpon HOM05D004646 ORTHO05D005829 1.1e-27 126.3 83 75.9
Migut.L01298 Erythranthe guttata HOM05D004646 ORTHO05D005829 3.3e-27 124.8 77 74.0
AagrBONN_evm.TU.Sc2ySwM_228.1869 Anthoceros agrestis HOM05D004646 ORTHO05D005829 3.7e-26 121.3 76 76.3
HPP92_027580 Vanilla planifolia HOM05D004646 ORTHO05D005829 2.4e-25 118.6 76 72.4
MBI05_g08286_MAGBIO Magnolia biondii HOM05D004646 ORTHO05D005829 3.1e-25 118.2 66 87.9
Cpa.g.sc128.19 Carica papaya HOM05D004646 ORTHO05D005829 6.9e-25 117.1 66 87.9
Dinv16641 Davidia involucrata HOM05D004646 ORTHO05D005829 1.2e-24 116.3 66 84.8
arahy.Tifrunner.gnm1.ann1.33WNW9 Arachis hypogaea HOM05D004646 ORTHO05D005829 2.6e-24 115.2 70 82.9
Mapoly0033s0092 Marchantia polymorpha HOM05D004646 ORTHO05D005829 3.4e-24 114.8 76 73.7
Rhsim12G0063600 Rhododendron simsii HOM05D004646 ORTHO05D005829 5.8e-24 114.0 67 82.1
Pp3c21_22610 Physcomitrium patens HOM05D004646 ORTHO05D005829 4.9e-23 110.9 76 71.1
arahy.Tifrunner.gnm1.ann1.PSIG0Y Arachis hypogaea HOM05D004646 ORTHO05D005829 5.5e-22 107.5 74 73.0
Lj2g0013736 Lotus japonicus HOM05D004646 ORTHO05D005829 7.1e-22 107.1 80 70.0
CBR_g52133 Chara braunii HOM05D004646 ORTHO05D005829 6.1e-21 104.0 76 64.5
Lj2g0003230 Lotus japonicus HOM05D004646 ORTHO05D005829 3.9e-20 101.3 67 76.1
ATR0307G135 Amborella trichopoda HOM05D004646 ORTHO05D005829 6.7e-20 100.5 73 61.6
A08p32030 Brassica napus HOM05D004646 ORTHO05D005829 6.7e-20 100.5 95 57.9
SMO007G0001 Selaginella moellendorffii HOM05D004646 ORTHO05D005829 6.7e-20 100.5 68 66.2
SMO200G0049 Selaginella moellendorffii HOM05D004646 ORTHO05D005829 6.7e-20 100.5 68 66.2
QL03p063041 Quercus lobata HOM05D004646 ORTHO05D005829 3.7e-18 94.7 74 67.6
TAR629G0643 Trochodendron aralioides HOM05D004646 ORTHO05D005829 4.1e-17 91.3 74 56.8
CDE04G3684 Ceratophyllum demersum HOM05D004646 ORTHO05D005829 1.4e-14 82.8 76 50.0
Nn1g09141 Nelumbo nucifera HOM05D004646 ORTHO05D005829 2.5e-14 82.0 74 50.0
Migut.L01299 Erythranthe guttata HOM05D004646 ORTHO05D005829 2.1e-13 79.0 64 59.4
PRCOL_00002500 Prasinoderma coloniale HOM05D004646 ORTHO05D005829 2.1e-13 79.0 77 46.8
PSO384G3479 Papaver somniferum HOM05D004646 ORTHO05D005829 3.6e-13 78.2 72 48.6
PSO767G0002 Papaver somniferum HOM05D004646 ORTHO05D005829 3.6e-13 78.2 72 48.6
Cre06.g310050 Chlamydomonas reinhardtii HOM05D004646 ORTHO05D005829 1.0e-12 76.6 79 45.6
Aa31sc1802G10 Aethionema arabicum HOM05D004646 ORTHO05D005829 2.0e-08 62.4 38 73.7
Hund05883 Selenicereus undatus HOM05D004646 ORTHO05D005829 4.5e-08 61.2 31 90.3
MD09G1249200 Malus domestica HOM05D005443 ORTHO05D009021 2.9e-07 58.5 60 50.0
CANSAT78G0275 Cannabis sativa HOM05D005443 ORTHO05D009021 8.5e-07 57.0 61 47.5
Gohir.A13G055900 Gossypium hirsutum HOM05D005443 ORTHO05D009021 1.4e-06 56.2 60 51.7
vmacro12294 Vaccinium macrocarpon HOM05D005443 ORTHO05D009021 1.4e-06 56.2 60 48.3
Gohir.D13G066100 Gossypium hirsutum HOM05D005443 ORTHO05D009021 1.9e-06 55.8 60 50.0
Gorai.013G075400 Gossypium raimondii HOM05D005443 ORTHO05D009021 1.9e-06 55.8 60 50.0
Rhsim06G0144000 Rhododendron simsii HOM05D005443 ORTHO05D009021 1.9e-06 55.8 60 48.3
CSS0011007 Camellia sinensis var. sinensis HOM05D005443 ORTHO05D009021 3.2e-06 55.1 60 48.3
CSS0037968 Camellia sinensis var. sinensis HOM05D005443 ORTHO05D009021 3.2e-06 55.1 60 48.3
MBI18_g16995_MAGBIO Magnolia biondii HOM05D005443 ORTHO05D009021 3.2e-06 55.1 55 47.3
RcHm_v2.0_Chr2g0126191 Rosa chinensis HOM05D005443 ORTHO05D009021 5.5e-06 54.3 60 46.7
HPP92_002356 Vanilla planifolia HOM05D006971 ORTHO05D009076 7.2e-06 53.9 46 56.5


User provided reference genes

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