Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_27780_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 0.0e+00 1156.0 616 100.0
Ca_15038_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 2.7e-240 835.5 670 73.1
TPR.G5137 Trifolium pratense HOM05D000092 ORTHO05D005910 9.6e-174 614.4 759 52.2
Medtr3g466750 Medicago truncatula HOM05D000092 ORTHO05D005910 3.4e-155 552.7 770 46.6
Medtr3g062420 Medicago truncatula HOM05D000092 ORTHO05D005910 2.0e-142 510.4 854 43.1
Medtr3g435040 Medicago truncatula HOM05D000092 ORTHO05D005910 7.2e-137 491.9 828 42.6
Psat5g155080 Pisum sativum HOM05D000092 ORTHO05D005910 4.4e-134 482.6 702 49.9
Medtr3g451150 Medicago truncatula HOM05D000092 ORTHO05D005910 2.2e-130 470.3 803 45.0
Medtr3g452250 Medicago truncatula HOM05D000092 ORTHO05D005910 2.2e-130 470.3 803 45.0
TPR.G5820 Trifolium pratense HOM05D000092 ORTHO05D005910 1.8e-124 450.7 925 39.0
Medtr3g062320 Medicago truncatula HOM05D000092 ORTHO05D005910 2.3e-122 443.7 538 53.0
Medtr3g063010 Medicago truncatula HOM05D000092 ORTHO05D005910 4.9e-117 426.0 719 43.1
Medtr3g062140 Medicago truncatula HOM05D000092 ORTHO05D005910 3.9e-114 416.4 700 43.7
Medtr3g062340 Medicago truncatula HOM05D000092 ORTHO05D005910 1.4e-111 407.9 755 42.8
TPR.G34177 Trifolium pratense HOM05D000092 ORTHO05D005910 2.3e-111 407.1 552 47.6
Ca_15035_v3 Cicer arietinum L. HOM05D000092 ORTHO05D000042 6.4e-109 399.1 635 44.3
Medtr3g062980 Medicago truncatula HOM05D000092 ORTHO05D005910 1.4e-108 397.9 549 48.5
Ca_14170_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 2.7e-107 393.7 328 68.0
Psat5g155000 Pisum sativum HOM05D000092 ORTHO05D005910 2.8e-104 383.6 527 49.0
Ca_14011_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 1.3e-101 374.8 629 44.0
Ca_14173_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 1.2e-99 368.2 288 70.5
Psat5g150000 Pisum sativum HOM05D000092 ORTHO05D005910 2.7e-99 367.1 538 47.2
Medtr3g464840 Medicago truncatula HOM05D000092 ORTHO05D005910 2.1e-96 357.5 678 43.4
Medtr3g464870 Medicago truncatula HOM05D000092 ORTHO05D005910 8.1e-96 355.5 848 36.8
TPR.G35834 Trifolium pratense HOM05D000092 ORTHO05D005910 8.1e-96 355.5 306 67.0
Medtr3g464920 Medicago truncatula HOM05D000092 ORTHO05D000042 1.1e-95 355.1 651 40.9
Medtr3g062180 Medicago truncatula HOM05D000092 ORTHO05D005910 6.4e-93 345.9 547 46.4
Medtr3g464810 Medicago truncatula HOM05D000092 ORTHO05D000042 2.1e-91 340.9 821 37.5
TPR.G15149 Trifolium pratense HOM05D000092 ORTHO05D005910 3.3e-89 333.6 564 42.6
Ca_30441_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 4.3e-89 333.2 242 72.3
Medtr3g464950 Medicago truncatula HOM05D000092 ORTHO05D000042 7.3e-89 332.4 701 38.4
Ca_14166_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 3.2e-84 317.0 285 62.5
Medtr3g062130 Medicago truncatula HOM05D000092 ORTHO05D005910 8.7e-82 308.9 487 46.0
Medtr3g062230 Medicago truncatula HOM05D008660 ORTHO05D005910 2.4e-79 300.8 491 41.5
Medtr2g049960 Medicago truncatula HOM05D000092 ORTHO05D005910 2.4e-76 290.8 248 63.3
Medtr3g062400 Medicago truncatula HOM05D000092 ORTHO05D005910 2.5e-73 280.8 292 56.8
TPR.G24935 Trifolium pratense HOM05D000092 ORTHO05D000042 4.3e-73 280.0 330 54.5
Psat5g155240 Pisum sativum HOM05D000092 ORTHO05D005910 9.6e-65 252.3 389 47.8
Ca_15039_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 2.8e-64 250.8 245 61.6
Psat5g156120 Pisum sativum HOM05D008660 ORTHO05D005910 2.8e-64 250.8 437 45.3
TPR.G35609 Trifolium pratense HOM05D000092 ORTHO05D005910 4.8e-64 250.0 274 56.6
Medtr0922s0020 Medicago truncatula HOM05D000092 ORTHO05D005910 4.0e-63 246.9 232 62.1
Medtr3g062090 Medicago truncatula HOM05D000092 ORTHO05D013095 1.2e-62 245.4 502 39.4
Medtr3g027360 Medicago truncatula HOM05D000092 ORTHO05D005910 2.0e-62 244.6 274 55.1
Medtr3g062010 Medicago truncatula HOM05D000092 ORTHO05D000042 5.8e-62 243.0 192 68.2
TPR.G27793 Trifolium pratense HOM05D000092 ORTHO05D005910 2.2e-61 241.1 249 58.2
Medtr2g023000 Medicago truncatula HOM05D000092 ORTHO05D005910 2.9e-61 240.7 492 40.4
TPR.G20384 Trifolium pratense HOM05D000092 ORTHO05D005910 2.5e-60 237.7 247 57.1
Ca_14165_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 1.2e-59 235.3 316 50.3
Medtr2g451270 Medicago truncatula HOM05D000092 ORTHO05D005910 1.6e-59 235.0 258 53.1
Medtr3g031750 Medicago truncatula HOM05D000092 ORTHO05D013095 6.7e-58 229.6 508 38.0
Psat5g149840 Pisum sativum HOM05D000092 ORTHO05D000042 3.8e-53 213.8 430 35.6
Psat7g235480 Pisum sativum HOM05D000092 ORTHO05D005910 1.9e-52 211.5 151 68.9
Medtr7g026240 Medicago truncatula HOM05D000092 ORTHO05D005910 2.1e-51 208.0 515 33.4
TPR.G13544 Trifolium pratense HOM05D000092 ORTHO05D005910 1.3e-50 205.3 161 68.3
Phvul.010G023400 Phaseolus vulgaris HOM05D000092 ORTHO05D005910 1.9e-49 201.4 190 58.4
Psat5g149920 Pisum sativum HOM05D000092 ORTHO05D005910 2.5e-49 201.1 430 39.5
TPR.G20720 Trifolium pratense HOM05D000092 ORTHO05D005910 5.7e-49 199.9 265 48.3
Medtr3g466530 Medicago truncatula HOM05D008660 ORTHO05D013095 1.2e-46 192.2 455 36.3
Medtr3g466590 Medicago truncatula HOM05D008660 ORTHO05D013095 2.9e-45 187.6 302 45.7
TPR.G40185 Trifolium pratense HOM05D000092 ORTHO05D005910 1.4e-44 185.3 261 47.9
Medtr3g062050 Medicago truncatula HOM05D008660 ORTHO05D005910 1.7e-40 171.8 331 43.2
VMungo0331G0363 Vigna mungo HOM05D000092 ORTHO05D000042 2.8e-40 171.0 671 28.0
TPR.G39686 Trifolium pratense HOM05D008660 ORTHO05D013095 8.2e-40 169.5 398 38.7
Medtr1147s0010 Medicago truncatula HOM05D000092 ORTHO05D005910 4.1e-39 167.2 172 56.4
TPR.G40621 Trifolium pratense HOM05D000092 ORTHO05D005910 9.1e-39 166.0 157 59.2
Psat5g150080 Pisum sativum HOM05D000092 ORTHO05D000042 7.7e-38 162.9 222 44.6
Medtr0043s0080 Medicago truncatula HOM05D008660 ORTHO05D005910 1.0e-37 162.5 355 36.6
TPR.G27790 Trifolium pratense HOM05D008660 ORTHO05D013095 3.2e-36 157.5 376 36.4
Medtr3g048690 Medicago truncatula HOM05D000092 ORTHO05D000042 5.5e-36 156.8 147 61.9
TPR.G27618 Trifolium pratense HOM05D008660 ORTHO05D005910 1.8e-34 151.8 310 37.1
Medtr3g467660 Medicago truncatula HOM05D008660 ORTHO05D005910 1.5e-33 148.7 228 48.7
Medtr3g436180 Medicago truncatula HOM05D008660 ORTHO05D005910 4.4e-33 147.1 204 47.1
Medtr3g069220 Medicago truncatula HOM05D000092 ORTHO05D005910 5.7e-33 146.7 114 66.7
Psat5g150040 Pisum sativum HOM05D000092 ORTHO05D005910 5.7e-33 146.7 96 75.0
TPR.G22097 Trifolium pratense HOM05D008660 ORTHO05D005910 9.7e-33 146.0 428 30.6
Medtr2g450490 Medicago truncatula HOM05D000092 ORTHO05D005910 1.8e-31 141.7 313 37.7
TPR.G27797 Trifolium pratense HOM05D008660 ORTHO05D013095 3.1e-31 141.0 464 32.8
Medtr0257s0040 Medicago truncatula HOM05D008660 ORTHO05D005910 4.1e-31 140.6 143 66.4
TPR.G28601 Trifolium pratense HOM05D008660 ORTHO05D005910 9.1e-31 139.4 165 50.9
TPR.G20665 Trifolium pratense HOM05D008660 ORTHO05D005910 1.0e-29 136.0 517 29.6
TPR.G35072 Trifolium pratense HOM05D000092 ORTHO05D005910 3.8e-29 134.0 117 60.7
TPR.G23432 Trifolium pratense HOM05D000092 ORTHO05D005910 5.5e-28 130.2 111 62.2
Medtr3g466610 Medicago truncatula HOM05D008660 ORTHO05D013095 2.7e-27 127.9 279 38.0
Ca_12578_v3 Cicer arietinum L. HOM05D000092 ORTHO05D000042 4.7e-27 127.1 479 26.7
arahy.Tifrunner.gnm1.ann1.79SUWC Arachis hypogaea HOM05D000092 ORTHO05D011874 8.0e-27 126.3 705 23.3
arahy.Tifrunner.gnm1.ann1.CULB88 Arachis hypogaea HOM05D008660 ORTHO05D005910 3.0e-26 124.4 528 24.6
TPR.G39391 Trifolium pratense HOM05D000092 ORTHO05D005910 4.0e-26 124.0 164 51.8
Medtr3g466550 Medicago truncatula HOM05D000092 ORTHO05D005910 4.4e-25 120.6 93 64.5
Medtr3g062390 Medicago truncatula HOM05D008660 ORTHO05D005910 7.5e-25 119.8 186 43.5
Medtr3g063320 Medicago truncatula HOM05D000092 ORTHO05D005910 7.5e-25 119.8 81 77.8
TPR.G26594 Trifolium pratense HOM05D008660 ORTHO05D005910 1.4e-23 115.5 375 29.9
Ca_31309_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 5.3e-23 113.6 118 64.4
Ca_06450_v3 Cicer arietinum L. HOM05D000092 ORTHO05D000042 1.2e-22 112.5 494 24.9
Medtr3g048593 Medicago truncatula HOM05D008660 ORTHO05D005910 1.3e-21 109.0 251 36.3
Medtr3g464820 Medicago truncatula HOM05D008660 ORTHO05D005910 2.9e-21 107.8 151 46.4
Medtr3g467640 Medicago truncatula HOM05D000092 ORTHO05D000042 1.9e-20 105.1 89 59.6
Lj1g0016459 Lotus japonicus HOM05D000092 ORTHO05D000042 3.2e-20 104.4 138 46.4
Phvul.010G025100 Phaseolus vulgaris HOM05D000092 ORTHO05D000042 5.2e-18 97.1 363 28.1
Medtr2g450480 Medicago truncatula HOM05D008660 ORTHO05D013095 2.6e-17 94.7 328 31.4
TPR.G10936 Trifolium pratense HOM05D000092 ORTHO05D005910 5.7e-17 93.6 201 37.8
Medtr3g466710 Medicago truncatula HOM05D000092 ORTHO05D000042 1.7e-16 92.0 140 42.1
TPR.G12235 Trifolium pratense HOM05D008660 ORTHO05D005910 3.7e-16 90.9 85 55.3
Psat5g149800 Pisum sativum HOM05D000092 ORTHO05D000042 1.1e-15 89.4 90 53.3
Psat5g150320 Pisum sativum HOM05D000092 ORTHO05D000042 5.4e-15 87.0 90 52.2
Phvul.010G023200 Phaseolus vulgaris HOM05D000092 ORTHO05D000042 1.6e-14 85.5 137 38.7
Medtr0067s0070 Medicago truncatula HOM05D000092 ORTHO05D000042 2.7e-14 84.7 91 50.5
Phvul.011G172100 Phaseolus vulgaris HOM05D000092 ORTHO05D011874 2.7e-14 84.7 524 24.8
Phvul.010G023100 Phaseolus vulgaris HOM05D000092 ORTHO05D000042 3.5e-14 84.3 327 26.6
TPR.G35614 Trifolium pratense HOM05D008660 ORTHO05D005910 7.7e-14 83.2 84 57.1
VMungo0331G0794 Vigna mungo HOM05D000092 ORTHO05D000042 8.6e-13 79.7 137 37.2
VMungo0251G2252 Vigna mungo HOM05D000092 ORTHO05D011874 1.5e-12 79.0 341 31.1
Glyma.14G008700 Glycine max HOM05D000092 ORTHO05D011874 3.3e-12 77.8 627 23.0
VMungo0251G2747 Vigna mungo HOM05D000092 ORTHO05D011874 3.3e-12 77.8 497 28.0
Phvul.003G002300 Phaseolus vulgaris HOM05D000092 ORTHO05D011874 4.2e-12 77.4 469 20.9
Medtr3g048603 Medicago truncatula HOM05D008660 ORTHO05D005910 5.5e-12 77.0 81 53.1
Medtr1236s0010 Medicago truncatula HOM05D008660 ORTHO05D005910 1.6e-11 75.5 68 54.4
VMungo1215G2963 Vigna mungo HOM05D000092 ORTHO05D011874 1.6e-11 75.5 493 25.2
arahy.Tifrunner.gnm1.ann1.JFQB2B Arachis hypogaea HOM05D000092 ORTHO05D011874 2.1e-11 75.1 529 24.0
Medtr3g062970 Medicago truncatula HOM05D000092 ORTHO05D000042 3.6e-11 74.3 71 56.3
arahy.Tifrunner.gnm1.ann1.5157VP Arachis hypogaea HOM05D000092 ORTHO05D011874 4.7e-11 73.9 660 22.1
TPR.G35612 Trifolium pratense HOM05D008660 ORTHO05D005910 6.1e-11 73.6 102 61.8
arahy.Tifrunner.gnm1.ann1.K6KWHM Arachis hypogaea HOM05D000092 ORTHO05D011874 1.4e-10 72.4 514 23.2
TPR.G8117 Trifolium pratense HOM05D027040 ORTHO05D036751 1.4e-10 72.4 160 25.0
arahy.Tifrunner.gnm1.ann1.7K0XBP Arachis hypogaea HOM05D000092 ORTHO05D005910 2.3e-10 71.6 508 21.7
VMungo0647G2334 Vigna mungo HOM05D000092 ORTHO05D011874 2.3e-10 71.6 399 24.6
VMungo0647G2113 Vigna mungo HOM05D000092 ORTHO05D011874 4.0e-10 70.9 260 28.8
Medtr0836s0010 Medicago truncatula HOM05D008660 ORTHO05D005910 5.2e-10 70.5 82 48.8
Phvul.003G002400 Phaseolus vulgaris HOM05D000092 ORTHO05D011874 6.8e-10 70.1 571 20.7
Glyma.11G171355 Glycine max HOM05D000092 ORTHO05D011874 4.4e-09 67.4 198 30.8
LjContig00081g0019700 Lotus japonicus HOM05D000092 ORTHO05D000042 7.5e-09 66.6 201 29.4
Phvul.003G002700 Phaseolus vulgaris HOM05D000092 ORTHO05D011874 7.5e-09 66.6 473 21.1
Lalb_Chr04g0248501 Lupinus albus HOM05D000092 ORTHO05D000042 9.8e-09 66.2 301 24.9
Phvul.003G003126 Phaseolus vulgaris HOM05D000092 ORTHO05D011874 2.8e-08 64.7 421 22.6
Lalb_Chr04g0250161 Lupinus albus HOM05D000092 ORTHO05D000042 3.7e-08 64.3 520 23.1
VMungo0647G1344 Vigna mungo HOM05D008660 ORTHO05D005910 6.3e-08 63.5 320 27.5
Medtr3g451630 Medicago truncatula HOM05D008660 ORTHO05D005910 8.3e-08 63.2 65 53.8
Medtr7g068110 Medicago truncatula HOM05D027040 ORTHO05D036751 8.3e-08 63.2 154 25.3
arahy.Tifrunner.gnm1.ann1.C8PGGG Arachis hypogaea HOM05D000092 ORTHO05D000042 1.4e-07 62.4 260 30.4
TPR.G29423 Trifolium pratense HOM05D000092 ORTHO05D005910 3.1e-07 61.2 253 27.3
arahy.Tifrunner.gnm1.ann1.332RDU Arachis hypogaea HOM05D000092 ORTHO05D000042 7.0e-07 60.1 260 29.6
Ca_26138_v3 Cicer arietinum L. HOM05D000092 ORTHO05D000042 7.0e-07 60.1 254 26.0
VMungo0331G0289 Vigna mungo HOM05D000092 ORTHO05D000042 7.0e-07 60.1 232 28.4
Medtr1g094040 Medicago truncatula HOM05D000092 ORTHO05D005910 1.2e-06 59.3 111 32.4
arahy.Tifrunner.gnm1.ann1.NLQ59B Arachis hypogaea HOM05D008660 ORTHO05D005910 1.6e-06 58.9 142 31.7
Medtr3g055230 Medicago truncatula HOM05D000092 ORTHO05D000042 2.7e-06 58.2 276 24.6
QL08p010984 Quercus lobata HOM05D000092 ORTHO05D000042 2.7e-06 58.2 168 29.2
QL10p036253 Quercus lobata HOM05D000092 ORTHO05D005910 3.5e-06 57.8 154 29.9
QL10p036439 Quercus lobata HOM05D000092 ORTHO05D005910 3.5e-06 57.8 154 29.9
Medtr1g025670 Medicago truncatula HOM05D058777 ORTHO05D259203 4.5e-06 57.4 116 31.0
Medtr7g068140 Medicago truncatula HOM05D027040 ORTHO05D036751 5.9e-06 57.0 158 25.3
Phvul.008G285300 Phaseolus vulgaris HOM05D000092 ORTHO05D011874 5.9e-06 57.0 70 38.6
Medtr1142s0010 Medicago truncatula HOM05D008660 ORTHO05D013095 7.8e-06 56.6 62 51.6
Phvul.008G246800 Phaseolus vulgaris HOM05D000092 ORTHO05D000042 7.8e-06 56.6 295 23.7


User provided reference genes

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