Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_27707_v3 Cicer arietinum L. HOM05D008537 ORTHO05D010652 3.5e-64 248.1 119 100.0
TPR.G35334 Trifolium pratense HOM05D008537 ORTHO05D010652 2.2e-58 228.8 113 96.5
arahy.Tifrunner.gnm1.ann1.DJ3Y2L Arachis hypogaea HOM05D008537 ORTHO05D010652 4.6e-56 221.1 110 96.4
arahy.Tifrunner.gnm1.ann1.PZS5LY Arachis hypogaea HOM05D008537 ORTHO05D010652 4.6e-56 221.1 110 96.4
RcHm_v2.0_MTg0499151 Rosa chinensis HOM05D008537 ORTHO05D010652 1.3e-55 219.5 114 93.0
SabraMtG0006100 Salix brachista HOM05D008537 ORTHO05D010652 2.3e-55 218.8 113 92.0
CsaV3_UNG209980 Cucumis sativus L. HOM05D008537 ORTHO05D010652 3.9e-55 218.0 113 92.0
arahy.Tifrunner.gnm1.ann1.75TDV4 Arachis hypogaea HOM05D008537 ORTHO05D010652 1.9e-54 215.7 110 93.6
Gorai.001G167800 Gossypium raimondii HOM05D008537 ORTHO05D010652 3.3e-54 214.9 108 95.4
Solyc00g500112.1 Solanum lycopersicum HOM05D008537 ORTHO05D010652 3.3e-54 214.9 114 91.2
Ah.10g028020 Amaranthus hybridus HOM05D008537 ORTHO05D010652 9.6e-54 213.4 114 91.2
Solyc00g500256.1 Solanum lycopersicum HOM05D008537 ORTHO05D010652 9.6e-54 213.4 113 91.2
BcaC09g49591 Brassica carinata HOM05D001560 ORTHO05D004675 2.1e-53 212.2 108 94.4
Actinidia34884 Actinidia chinensis HOM05D008537 ORTHO05D010652 4.0e-52 208.0 110 91.8
CDE02G3137 Ceratophyllum demersum HOM05D008537 ORTHO05D010652 7.6e-51 203.8 117 86.3
CARHR287170 Cardamine hirsuta HOM05D008537 ORTHO05D010652 3.4e-43 178.3 93 94.6
Aa31csc464G100 Aethionema arabicum HOM05D008537 ORTHO05D010652 5.8e-43 177.6 99 87.9
SEGI_04170 Sequoiadendron giganteum HOM05D008537 ORTHO05D010652 2.1e-40 169.1 107 79.4
SEGI_18574 Sequoiadendron giganteum HOM05D008537 ORTHO05D010652 2.1e-40 169.1 107 79.4
Lalb_Chr00c51g0413211 Lupinus albus HOM05D008537 ORTHO05D010652 3.5e-40 168.3 89 93.3
SEGI_08781 Sequoiadendron giganteum HOM05D008537 ORTHO05D010652 1.0e-39 166.8 107 78.5
BolSC28t60361H Brassica oleracea HOM05D008537 ORTHO05D010652 3.8e-34 148.3 98 79.6
BraSC177t45759Z Brassica rapa HOM05D008537 ORTHO05D010652 3.8e-34 148.3 98 79.6
BraSC48t46348Z Brassica rapa HOM05D008537 ORTHO05D010652 3.8e-34 148.3 98 79.6
Solyc11g030915.1 Solanum lycopersicum HOM05D008537 ORTHO05D010652 3.2e-33 145.2 98 74.5
LjContig00439g0010598 Lotus japonicus HOM05D008537 ORTHO05D010652 7.1e-33 144.1 101 76.2
LjContig00446g0012519 Lotus japonicus HOM05D008537 ORTHO05D010652 7.1e-33 144.1 101 76.2
Glyma.17G185800 Glycine max HOM05D008537 ORTHO05D010652 2.8e-29 132.1 98 73.5
C01p34740 Brassica napus HOM05D008537 ORTHO05D010652 1.4e-28 129.8 98 70.4
EL10Ac5g12180 Beta vulgaris HOM05D008537 ORTHO05D010652 2.7e-24 115.5 114 57.9
Mapoly3683s0001 Marchantia polymorpha HOM05D008537 ORTHO05D010652 6.9e-20 100.9 77 66.2
ATR1126G003 Amborella trichopoda HOM05D008537 ORTHO05D010652 1.1e-14 83.6 47 89.4
SHI26665 Sapria himalayana HOM05D008537 ORTHO05D010652 2.7e-08 62.4 35 82.9
TAR022G0005 Trochodendron aralioides HOM05D001750 ORTHO05D001825 6.1e-08 61.2 93 34.4
Solyc10g045727.1 Solanum lycopersicum HOM05D008537 ORTHO05D010652 5.1e-07 58.2 39 71.8


User provided reference genes

Program Settings