Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_27688_v3 Cicer arietinum L. HOM05D005888 ORTHO05D007791 5.6e-172 607.4 294 100.0
Medtr7g029350 Medicago truncatula HOM05D005888 ORTHO05D007791 6.9e-61 238.4 132 85.6
Glyma.16G057700 Glycine max HOM05D005888 ORTHO05D007791 1.6e-54 217.2 135 77.0
arahy.Tifrunner.gnm1.ann1.BEVL6N Arachis hypogaea HOM05D005888 ORTHO05D007791 3.6e-54 216.1 142 72.5
Phvul.001G094800 Phaseolus vulgaris HOM05D005888 ORTHO05D007791 1.4e-53 214.2 134 75.4
VMungo1383G0786 Vigna mungo HOM05D005888 ORTHO05D007791 1.8e-53 213.8 136 73.5
Lj1g0026523 Lotus japonicus HOM05D005888 ORTHO05D007791 2.6e-52 209.9 141 72.3
arahy.Tifrunner.gnm1.ann1.269ICV Arachis hypogaea HOM05D005888 ORTHO05D007791 1.3e-51 207.6 144 70.1
vmacro05950 Vaccinium macrocarpon HOM05D005888 ORTHO05D007791 6.7e-48 195.3 136 67.6
Lalb_Chr22g0360441 Lupinus albus HOM05D005888 ORTHO05D007791 5.3e-45 185.7 143 62.9
MD09G1012500 Malus domestica HOM05D005888 ORTHO05D007791 5.3e-45 185.7 139 65.5
QL02p071659 Quercus lobata HOM05D005888 ORTHO05D007791 5.8e-44 182.2 133 66.9
Rhsim10G0007200 Rhododendron simsii HOM05D005888 ORTHO05D007791 1.0e-43 181.4 137 63.5
Actinidia05914 Actinidia chinensis HOM05D005888 ORTHO05D007791 6.5e-43 178.7 137 62.0
Duzib187G0894 Durio zibethinus HOM05D005888 ORTHO05D007791 6.5e-43 178.7 137 62.0
Prupe.3G304500 Prunus persica HOM05D005888 ORTHO05D007791 8.4e-43 178.3 138 62.3
Lsat_1_v5_gn_2_94140 Lactuca sativa HOM05D005888 ORTHO05D007791 1.9e-42 177.2 114 69.3
Hma1.2p1_0279F.1_g112650 Hydrangea macrophylla HOM05D005888 ORTHO05D007791 3.2e-42 176.4 88 81.8
Dinv33348 Davidia involucrata HOM05D005888 ORTHO05D007791 4.2e-42 176.0 138 63.8
FAN02G1540 Fragaria x ananassa HOM05D005888 ORTHO05D007791 1.2e-41 174.5 108 71.3
HanXRQChr14g0450691 Helianthus annuus HOM05D005888 ORTHO05D007791 1.2e-41 174.5 148 58.8
Ciclev10014957m.g Citrus clementina HOM05D005888 ORTHO05D007791 1.6e-41 174.1 131 62.6
Gohir.D10G084400 Gossypium hirsutum HOM05D005888 ORTHO05D007791 1.6e-41 174.1 140 60.0
Gorai.011G091800 Gossypium raimondii HOM05D005888 ORTHO05D007791 1.6e-41 174.1 140 60.0
Lju41C52T2 Lonicera japonica HOM05D005888 ORTHO05D007791 1.6e-41 174.1 124 65.3
PGR083G0577 Punica granatum HOM05D005888 ORTHO05D007791 1.6e-41 174.1 134 59.7
Cpa.g.sc171.27 Carica papaya HOM05D005888 ORTHO05D007791 4.6e-41 172.6 118 66.1
Thecc.04G034400 Theobroma cacao HOM05D005888 ORTHO05D007791 4.6e-41 172.6 141 61.0
MSTRG.15566 Avicennia marina HOM05D005888 ORTHO05D007791 6.0e-41 172.2 125 64.0
PGSC0003DMG400013424 Solanum tuberosum HOM05D005888 ORTHO05D007791 6.0e-41 172.2 127 60.6
Cc07_g00720 Coffea canephora HOM05D005888 ORTHO05D007791 1.0e-40 171.4 129 60.5
FAN09G0079 Fragaria x ananassa HOM05D000071 ORTHO05D007791 1.0e-40 171.4 95 75.8
RcHm_v2.0_Chr2g0175381 Rosa chinensis HOM05D005888 ORTHO05D007791 1.0e-40 171.4 96 74.0
MELO3C014874.2 Cucumis melo HOM05D005888 ORTHO05D007791 1.3e-40 171.0 140 59.3
DCAR_021782 Daucus carota HOM05D005888 ORTHO05D007791 1.8e-40 170.6 138 58.0
FvH4_6g53250 Fragaria vesca HOM05D005888 ORTHO05D007791 1.8e-40 170.6 136 58.1
FAN14G3555 Fragaria x ananassa HOM05D005888 ORTHO05D007791 1.8e-40 170.6 136 58.1
ECA238G1812 Erigeron canadensis HOM05D005888 ORTHO05D001226 3.0e-40 169.9 114 66.7
Thhalv10003965m.g Eutrema salsugineum HOM05D005888 ORTHO05D007791 3.9e-40 169.5 126 62.7
FAN05G3931 Fragaria x ananassa HOM05D005888 ORTHO05D007791 3.9e-40 169.5 138 57.2
Oeu011755.2 Olea europaea HOM05D005888 ORTHO05D007791 3.9e-40 169.5 130 63.8
A06p41440 Brassica napus HOM05D005888 ORTHO05D007791 5.1e-40 169.1 126 60.3
TPR.G38314 Trifolium pratense HOM05D005888 ORTHO05D007791 5.1e-40 169.1 88 85.2
GSVIVG01033109001 Vitis vinifera HOM05D005888 ORTHO05D007791 5.1e-40 169.1 130 61.5
AL5G16294 Arabidopsis lyrata HOM05D005888 ORTHO05D007791 6.7e-40 168.7 126 59.5
CANSAT64G1138 Cannabis sativa HOM05D005888 ORTHO05D007791 6.7e-40 168.7 154 54.5
AUR62034780 Chenopodium quinoa HOM05D005888 ORTHO05D007791 6.7e-40 168.7 97 71.1
Manes.15G159600 Manihot esculenta HOM05D005888 ORTHO05D007791 6.7e-40 168.7 139 60.4
BcaC06g33851 Brassica carinata HOM05D005888 ORTHO05D007791 8.7e-40 168.3 126 60.3
C07p36200 Brassica napus HOM05D005888 ORTHO05D007791 8.7e-40 168.3 126 60.3
BolC7t44136H Brassica oleracea HOM05D005888 ORTHO05D007791 8.7e-40 168.3 126 60.3
Cfa007240 Carpinus fangiana HOM05D005888 ORTHO05D007791 8.7e-40 168.3 133 61.7
Carub.0005s0545 Capsella rubella HOM05D005888 ORTHO05D007791 1.5e-39 167.5 126 59.5
Sp2g16300 Schrenkiella parvula HOM05D005888 ORTHO05D007791 3.3e-39 166.4 125 60.0
SalBow7G4553 Salvia bowleyana HOM05D005888 ORTHO05D007791 4.3e-39 166.0 90 77.8
AT3G27180 Arabidopsis thaliana HOM05D005888 ORTHO05D007791 9.6e-39 164.9 126 58.7
CsaV3_3G027150 Cucumis sativus L. HOM05D005888 ORTHO05D007791 9.6e-39 164.9 140 57.1
Atru.chr6.2542 Acer truncatum HOM05D005888 ORTHO05D007791 1.3e-38 164.5 107 68.2
CARHR148380 Cardamine hirsuta HOM05D005888 ORTHO05D007791 1.3e-38 164.5 127 59.8
Sabra16G0212900 Salix brachista HOM05D005888 ORTHO05D007791 1.3e-38 164.5 126 61.1
THA.LOC104823976 Tarenaya hassleriana HOM05D005888 ORTHO05D007791 1.3e-38 164.5 128 59.4
Solyc03g005010.4 Solanum lycopersicum HOM05D005888 ORTHO05D007791 2.1e-38 163.7 131 58.0
CiPaw.03G054300 Carya illinoinensis HOM05D005888 ORTHO05D007791 3.7e-38 162.9 142 57.0
Nn4g22357 Nelumbo nucifera HOM05D005888 ORTHO05D007791 4.8e-38 162.5 106 67.0
TWI36G1634 Tripterygium wilfordii HOM05D005888 ORTHO05D007791 4.8e-38 162.5 131 59.5
Atru.chr6.2554 Acer truncatum HOM05D005888 ORTHO05D007791 6.3e-38 162.2 96 72.9
Atru.chr6.2546 Acer truncatum HOM05D005888 ORTHO05D007791 8.2e-38 161.8 96 71.9
Aqoxy5G03414 Aquilegia oxysepala HOM05D005888 ORTHO05D007791 8.2e-38 161.8 88 79.5
Sopen03g001020 Solanum pennellii HOM05D005888 ORTHO05D007791 1.1e-37 161.4 131 57.3
Gohir.A10G159400 Gossypium hirsutum HOM05D005888 ORTHO05D007791 1.4e-37 161.0 136 55.9
Sc03g0006610 Simmondsia chinensis HOM05D005888 ORTHO05D007791 1.4e-37 161.0 107 64.5
CSS0026485 Camellia sinensis var. sinensis HOM05D005888 ORTHO05D007791 1.8e-37 160.6 126 61.9
Eucgr.J02331 Eucalyptus grandis HOM05D005888 ORTHO05D007791 1.8e-37 160.6 135 57.8
Potri.001G331900 Populus trichocarpa HOM05D005888 ORTHO05D007791 1.8e-37 160.6 126 60.3
BraA06t27070Z Brassica rapa HOM05D005888 ORTHO05D007791 2.4e-37 160.2 126 57.1
Aa31LG2G5450 Aethionema arabicum HOM05D005888 ORTHO05D007791 6.9e-37 158.7 137 55.5
Sed0023439 Sechium edule HOM05D005888 ORTHO05D007791 6.9e-37 158.7 103 68.0
Migut.K01458 Erythranthe guttata HOM05D005888 ORTHO05D007791 9.0e-37 158.3 135 58.5
EL10Ac5g11325 Beta vulgaris HOM05D005888 ORTHO05D007791 1.5e-36 157.5 134 52.2
ClCG05G013410 Citrullus lanatus HOM05D005888 ORTHO05D007791 2.0e-36 157.1 136 57.4
Nitab4.5_0005161g0030 Nicotiana tabacum HOM05D005888 ORTHO05D007791 2.0e-36 157.1 140 54.3
Nitab4.5_0000559g0440 Nicotiana tabacum HOM05D005888 ORTHO05D007791 2.6e-36 156.8 142 53.5
SGA_v2.0_scaffold47G17585 Striga asiatica HOM05D005888 ORTHO05D000781 3.4e-36 156.4 87 74.7
PSO782G2046 Papaver somniferum HOM05D005888 ORTHO05D007791 4.5e-36 156.0 129 59.7
PSO063G1934 Papaver somniferum HOM05D005888 ORTHO05D007791 1.3e-35 154.5 128 58.6
COL.COLO4_17186 Corchorus olitorius HOM05D005888 ORTHO05D007791 2.5e-34 150.2 79 77.2
Psat3g164600 Pisum sativum HOM05D005888 ORTHO05D007791 9.3e-34 148.3 92 76.1
Haze_14860 Corylus avellana HOM05D005888 ORTHO05D007791 2.3e-32 143.7 139 55.4
Peaxi162Scf00700g00115 Petunia axillaris HOM05D005888 ORTHO05D007791 1.1e-31 141.4 76 73.7
CDE05G3258 Ceratophyllum demersum HOM05D005888 ORTHO05D007791 1.3e-30 137.9 104 59.6
ATR0561G016 Amborella trichopoda HOM05D005888 ORTHO05D007791 1.7e-27 127.5 133 51.9
Zm00001eb364480 Zea mays HOM05D005888 ORTHO05D007791 1.7e-27 127.5 112 58.9
HPP92_006968 Vanilla planifolia HOM05D005888 ORTHO05D007791 3.2e-26 123.2 115 52.2
AagrBONN_evm.TU.Sc2ySwM_344.2002 Anthoceros agrestis HOM05D005888 ORTHO05D007791 3.3e-23 113.2 101 49.5
Mapoly0035s0136 Marchantia polymorpha HOM05D005888 ORTHO05D007791 2.8e-22 110.2 83 54.2
Pp3c10_19430 Physcomitrium patens HOM05D005888 ORTHO05D007791 5.0e-19 99.4 83 49.4
MD17G1013100 Malus domestica HOM05D005888 ORTHO05D007791 2.3e-16 90.5 102 46.1
SMO364G0044 Selaginella moellendorffii HOM05D005888 ORTHO05D007791 2.3e-16 90.5 76 47.4
BcaNung06416 Brassica carinata HOM05D005888 ORTHO05D007791 3.9e-16 89.7 88 47.7
Ah.11g046710 Amaranthus hybridus HOM05D005888 ORTHO05D007791 1.1e-15 88.2 93 47.3
Cre13.g578201 Chlamydomonas reinhardtii HOM05D005888 ORTHO05D007791 3.7e-14 83.2 85 45.9
AUR62009505 Chenopodium quinoa HOM05D005888 ORTHO05D007791 1.4e-13 81.3 38 86.8
AUR62044347 Chenopodium quinoa HOM05D005888 ORTHO05D007791 1.4e-13 81.3 38 86.8
Psat5g016360 Pisum sativum HOM05D000004 ORTHO05D000002 2.3e-08 63.9 47 57.4
MCO16G034 Micromonas commoda HOM05D005888 ORTHO05D007791 5.2e-08 62.8 115 33.0
arahy.Tifrunner.gnm1.ann1.3FLP3Q Arachis hypogaea HOM05D005888 ORTHO05D007791 1.5e-07 61.2 36 72.2
Psat5g253680 Pisum sativum HOM05D000004 ORTHO05D000002 7.5e-07 58.9 81 39.5
TPR.G9173 Trifolium pratense HOM05D000004 ORTHO05D000002 9.7e-07 58.5 90 40.0
FAN18G4156 Fragaria x ananassa HOM05D005888 ORTHO05D045398 1.3e-06 58.2 37 59.5
Ca_10432_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 8.2e-06 55.5 90 40.0


User provided reference genes

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