Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_27682_v3 Cicer arietinum L. HOM05D007067 ORTHO05D008864 2.4e-104 382.1 187 100.0
TPR.G11876 Trifolium pratense HOM05D007067 ORTHO05D008864 6.1e-87 324.3 188 86.2
Lj1g0007284 Lotus japonicus HOM05D007067 ORTHO05D008864 3.3e-85 318.5 187 84.0
Medtr3g435320 Medicago truncatula HOM05D007067 ORTHO05D008864 4.8e-84 314.7 188 84.6
Psat5g201280 Pisum sativum HOM05D007067 ORTHO05D008864 3.1e-83 312.0 188 83.0
Glyma.06G195200 Glycine max HOM05D007067 ORTHO05D008864 2.5e-80 302.4 182 83.0
Glyma.04G167400 Glycine max HOM05D007067 ORTHO05D008864 3.2e-80 302.0 182 83.5
arahy.Tifrunner.gnm1.ann1.V8ZK3N Arachis hypogaea HOM05D007067 ORTHO05D008864 2.5e-77 292.4 187 78.6
arahy.Tifrunner.gnm1.ann1.JMB3VF Arachis hypogaea HOM05D007067 ORTHO05D008864 5.7e-77 291.2 187 78.6
Phvul.009G186200 Phaseolus vulgaris HOM05D007067 ORTHO05D008864 2.4e-75 285.8 187 75.9
Lalb_Chr08g0235641 Lupinus albus HOM05D007067 ORTHO05D008864 6.9e-75 284.3 193 76.7
MD06G1195600 Malus domestica HOM05D007067 ORTHO05D008864 3.8e-65 251.9 188 66.0
MD14G1202700 Malus domestica HOM05D007067 ORTHO05D008864 8.5e-65 250.8 189 67.7
QL10p017305 Quercus lobata HOM05D007067 ORTHO05D008864 9.4e-64 247.3 186 63.4
Prupe.5G195500 Prunus persica HOM05D007067 ORTHO05D008864 1.2e-63 246.9 191 64.9
TWI60G1483 Tripterygium wilfordii HOM05D007067 ORTHO05D008864 4.0e-62 241.9 181 66.9
Cfa018925 Carpinus fangiana HOM05D007067 ORTHO05D008864 5.2e-62 241.5 187 64.2
CAN.G846.12 Capsicum annuum HOM05D007067 ORTHO05D008864 6.7e-62 241.1 187 63.6
CSS0040643 Camellia sinensis var. sinensis HOM05D007067 ORTHO05D008864 8.8e-62 240.7 188 64.9
FAN18G1220 Fragaria x ananassa HOM05D007067 ORTHO05D008864 8.8e-62 240.7 192 66.1
FAN13G0188 Fragaria x ananassa HOM05D007067 ORTHO05D008864 1.1e-61 240.4 192 66.1
Rhsim08G0153200 Rhododendron simsii HOM05D007067 ORTHO05D008864 3.3e-61 238.8 188 65.4
RcHm_v2.0_Chr7g0181701 Rosa chinensis HOM05D007067 ORTHO05D008864 3.3e-61 238.8 192 65.6
FAN08G0270 Fragaria x ananassa HOM05D007067 ORTHO05D008864 4.4e-61 238.4 192 65.6
Nitab4.5_0005226g0040 Nicotiana tabacum HOM05D007067 ORTHO05D008864 4.4e-61 238.4 187 61.5
vmacro17532 Vaccinium macrocarpon HOM05D007067 ORTHO05D008864 9.7e-61 237.3 188 63.8
Nitab4.5_0003381g0030 Nicotiana tabacum HOM05D007067 ORTHO05D008864 1.3e-60 236.9 187 61.0
GSVIVG01004672001 Vitis vinifera HOM05D007067 ORTHO05D008864 1.1e-59 233.8 182 62.6
GSVIVG01005334001 Vitis vinifera HOM05D007067 ORTHO05D008864 1.1e-59 233.8 182 62.6
TAR622G0622 Trochodendron aralioides HOM05D007067 ORTHO05D008864 5.3e-59 231.5 189 61.9
Cc04_g16320 Coffea canephora HOM05D007067 ORTHO05D008864 9.1e-59 230.7 188 61.2
SalBow3G2729 Salvia bowleyana HOM05D007067 ORTHO05D008864 2.0e-58 229.6 187 62.6
MSTRG.9621 Avicennia marina HOM05D007067 ORTHO05D008864 4.5e-58 228.4 189 60.3
Aqoxy3G00483 Aquilegia oxysepala HOM05D007067 ORTHO05D008864 5.9e-58 228.0 188 61.7
Manes.06G091000 Manihot esculenta HOM05D007067 ORTHO05D008864 5.9e-58 228.0 182 63.2
Actinidia04879 Actinidia chinensis HOM05D007067 ORTHO05D008864 7.7e-58 227.6 182 61.0
CiPaw.11G046200 Carya illinoinensis HOM05D007067 ORTHO05D008864 1.7e-57 226.5 181 61.3
MELO3C017182.2 Cucumis melo HOM05D007067 ORTHO05D008864 1.7e-57 226.5 181 64.1
DCAR_016569 Daucus carota HOM05D007067 ORTHO05D008864 2.2e-57 226.1 186 62.4
Nn3g17293 Nelumbo nucifera HOM05D007067 ORTHO05D008864 2.2e-57 226.1 187 59.9
CsaV3_1G002440 Cucumis sativus L. HOM05D007067 ORTHO05D008864 8.5e-57 224.2 181 64.1
EL10Ac5g11044 Beta vulgaris HOM05D007067 ORTHO05D008864 1.1e-56 223.8 188 61.2
Potri.012G068500 Populus trichocarpa HOM05D007067 ORTHO05D008864 1.1e-56 223.8 181 61.9
ClCG06G016120 Citrullus lanatus HOM05D007067 ORTHO05D008864 3.2e-56 222.2 181 61.9
MBI02_g12272_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 3.2e-56 222.2 187 59.4
Sopen12g016290 Solanum pennellii HOM05D007067 ORTHO05D008864 4.7e-55 218.4 136 72.1
Solyc12g036170.2 Solanum lycopersicum HOM05D007067 ORTHO05D008864 6.1e-55 218.0 136 72.8
Duzib205G1209 Durio zibethinus HOM05D007067 ORTHO05D008864 1.4e-54 216.9 187 61.5
HanXRQChr05g0156061 Helianthus annuus HOM05D007067 ORTHO05D008864 1.4e-54 216.9 188 60.6
Thecc.03G091100 Theobroma cacao HOM05D007067 ORTHO05D008864 1.4e-54 216.9 186 59.1
CANSAT56G4102 Cannabis sativa HOM05D007067 ORTHO05D008864 1.8e-54 216.5 186 60.8
Sabra12G0047100 Salix brachista HOM05D007067 ORTHO05D008864 1.8e-54 216.5 181 59.7
PGSC0003DMG400021933 Solanum tuberosum HOM05D007067 ORTHO05D008864 2.3e-54 216.1 187 59.4
Hma1.2p1_0637F.1_g193620 Hydrangea macrophylla HOM05D007067 ORTHO05D008864 3.0e-54 215.7 129 76.7
Cpa.g.sc111.20 Carica papaya HOM05D007067 ORTHO05D008864 5.2e-54 214.9 182 61.0
ECA246G0430 Erigeron canadensis HOM05D007067 ORTHO05D008864 1.5e-53 213.4 187 61.0
CDE02G3919 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 4.4e-53 211.8 189 58.7
Eucgr.K02487 Eucalyptus grandis HOM05D007067 ORTHO05D008864 5.7e-53 211.5 182 58.8
Peaxi162Scf00106g00326 Petunia axillaris HOM05D007067 ORTHO05D008864 1.3e-52 210.3 178 60.1
Dinv38731 Davidia involucrata HOM05D007067 ORTHO05D008864 4.8e-52 208.4 187 57.2
Gorai.003G097800 Gossypium raimondii HOM05D007067 ORTHO05D008864 4.8e-52 208.4 181 58.0
AUR62008437 Chenopodium quinoa HOM05D007067 ORTHO05D008864 6.3e-52 208.0 132 72.7
Gohir.D03G093800 Gossypium hirsutum HOM05D007067 ORTHO05D008864 8.3e-52 207.6 181 58.0
Atru.chr9.195 Acer truncatum HOM05D007067 ORTHO05D008864 1.1e-51 207.2 183 60.1
Gohir.A03G067300 Gossypium hirsutum HOM05D007067 ORTHO05D008864 1.1e-51 207.2 181 58.0
Lj5A109T72 Lonicera japonica HOM05D007067 ORTHO05D008864 1.8e-51 206.5 148 67.6
ATR0564G121 Amborella trichopoda HOM05D007067 ORTHO05D008864 2.4e-51 206.1 194 57.7
Sed0012968 Sechium edule HOM05D007067 ORTHO05D008864 3.1e-51 205.7 184 57.6
PSO063G5395 Papaver somniferum HOM05D007067 ORTHO05D008864 2.7e-50 202.6 187 58.3
PSO832G0421 Papaver somniferum HOM05D007067 ORTHO05D008864 3.5e-50 202.2 187 58.3
Migut.D01803 Erythranthe guttata HOM05D007067 ORTHO05D008864 7.7e-50 201.1 185 58.9
unitig_0.g778 Utricularia gibba HOM05D007067 ORTHO05D008864 1.0e-49 200.7 188 59.0
THA.LOC104808257 Tarenaya hassleriana HOM05D007067 ORTHO05D008864 2.2e-49 199.5 183 56.3
CDE09G1053 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 3.8e-49 198.7 133 69.9
AL1G31200 Arabidopsis lyrata HOM05D007067 ORTHO05D008864 3.2e-48 195.7 182 58.2
Lsat_1_v5_gn_5_20880 Lactuca sativa HOM05D007067 ORTHO05D008864 4.2e-48 195.3 128 73.4
AT1G18730 Arabidopsis thaliana HOM05D007067 ORTHO05D008864 1.6e-47 193.4 185 57.3
BcaB07g31890 Brassica carinata HOM05D007067 ORTHO05D008864 2.7e-47 192.6 185 57.3
Sp1g16740 Schrenkiella parvula HOM05D007067 ORTHO05D008864 1.4e-46 190.3 182 58.2
Carub.0001s1838 Capsella rubella HOM05D007067 ORTHO05D008864 2.3e-46 189.5 183 56.8
PGR044G1431 Punica granatum HOM05D007067 ORTHO05D008864 3.0e-46 189.1 181 56.4
C05p17040 Brassica napus HOM05D007067 ORTHO05D008864 4.0e-46 188.7 182 56.6
BolC5t30410H Brassica oleracea HOM05D007067 ORTHO05D008864 4.0e-46 188.7 182 56.6
BcaC05g25773 Brassica carinata HOM05D007067 ORTHO05D008864 6.8e-46 188.0 182 57.1
A06p14840 Brassica napus HOM05D007067 ORTHO05D008864 6.8e-46 188.0 183 57.4
BraA06t24606Z Brassica rapa HOM05D007067 ORTHO05D008864 6.8e-46 188.0 183 57.4
C08p43060 Brassica napus HOM05D007067 ORTHO05D008864 1.2e-45 187.2 182 56.0
CARHR019370 Cardamine hirsuta HOM05D007067 ORTHO05D008864 1.5e-45 186.8 185 56.8
BcaB03g14481 Brassica carinata HOM05D007067 ORTHO05D008864 4.4e-45 185.3 187 56.7
A09p59720 Brassica napus HOM05D007067 ORTHO05D008864 4.4e-45 185.3 182 56.0
BraA09t41348Z Brassica rapa HOM05D007067 ORTHO05D008864 4.4e-45 185.3 182 56.0
Eucgr.K02485 Eucalyptus grandis HOM05D007067 ORTHO05D008864 5.7e-45 184.9 170 55.9
Thhalv10008902m.g Eutrema salsugineum HOM05D007067 ORTHO05D008864 5.7e-45 184.9 183 55.7
MBI02_g23462_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 7.5e-45 184.5 184 53.8
Peaxi162Scf00106g00037 Petunia axillaris HOM05D007067 ORTHO05D008864 9.8e-45 184.1 117 74.4
BolC8t51861H Brassica oleracea HOM05D007067 ORTHO05D008864 2.4e-43 179.5 190 54.7
Aa31LG7G3520 Aethionema arabicum HOM05D007067 ORTHO05D008864 3.5e-42 175.6 117 67.5
Zm00001eb254450 Zea mays HOM05D007067 ORTHO05D008864 7.2e-40 167.9 139 59.0
AUR62021654 Chenopodium quinoa HOM05D007067 ORTHO05D008864 5.2e-38 161.8 148 56.1
Os02g0744000 Oryza sativa ssp. japonica HOM05D007067 ORTHO05D008864 3.7e-36 155.6 184 48.4
COL.COLO4_28333 Corchorus olitorius HOM05D007067 ORTHO05D008864 8.3e-36 154.5 186 49.5
SEGI_39094 Sequoiadendron giganteum HOM05D007067 ORTHO05D008864 1.6e-31 140.2 146 48.6
BcaC07g41296 Brassica carinata HOM05D007067 ORTHO05D008864 2.8e-31 139.4 105 63.8
FvH4_5g14690 Fragaria vesca HOM05D007067 ORTHO05D008864 8.0e-31 137.9 124 57.3
Rhsim08G0153500 Rhododendron simsii HOM05D007067 ORTHO05D008864 1.9e-27 126.7 181 44.2
Ciclev10022880m.g Citrus clementina HOM05D007067 ORTHO05D008864 3.5e-26 122.5 115 52.2
CBR_g30507 Chara braunii HOM05D007067 ORTHO05D008864 4.3e-24 115.5 137 45.3
Pp3c16_3930 Physcomitrium patens HOM05D007067 ORTHO05D008864 8.3e-20 101.3 96 50.0
Mapoly0149s0008 Marchantia polymorpha HOM05D007067 ORTHO05D008864 3.2e-19 99.4 102 44.1
Haze_07309 Corylus avellana HOM05D007067 ORTHO05D008864 2.8e-15 86.3 187 34.8
Manes.06G090801 Manihot esculenta HOM05D007067 ORTHO05D008864 3.1e-14 82.8 112 45.5
Ah.11g048310 Amaranthus hybridus HOM05D007067 ORTHO05D008864 4.9e-12 75.5 48 64.6
Rhsim08G0168600 Rhododendron simsii HOM05D000306 ORTHO05D023263 2.4e-06 56.6 42 71.4
COL.COLO4_28352 Corchorus olitorius HOM05D004600 ORTHO05D005471 4.0e-06 55.8 52 63.5


User provided reference genes

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